FFCP PHASE1:Hg19::chr21:44590304..44590313,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1409 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2388 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-23bp_to_ENST00000468016_5end | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_6_at_CRYAA_5end | |||
|id=chr21:44590304..44590313,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.12e-15!12;CL:0000417!2.12e-15!12;CL:0000668!2.12e-15!12;CL:0000414!2.12e-15!12;CL:0000412!2.12e-15!12;CL:0000182!2.12e-15!12;CL:0002322!1.06e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.74e-23;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.74e-23,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.20e-25;11!UBERON:0009497;2.66e-21;13!UBERON:0003104;1.08e-19;31!UBERON:0001041;6.52e-10;30!UBERON:0003918;5.73e-08;10!UBERON:0007687;5.73e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;5.80e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,7.07e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!7.53e-15!19;UBERON:0006925!7.53e-15!19;UBERON:0008836!7.53e-15!19;UBERON:0008835!8.15e-13!22;UBERON:0003894!8.15e-13!22;UBERON:0009854!2.96e-12!23;UBERON:0007499!2.88e-11!25;UBERON:0009497!2.88e-11!25;UBERON:0000015!2.88e-11!25;UBERON:0002423!2.88e-11!25;UBERON:0006235!2.88e-11!25;UBERON:0004161!2.88e-11!25;UBERON:0005057!7.89e-11!26;UBERON:0009856!7.89e-11!26;UBERON:0005172!2.06e-09!55;UBERON:0005173!2.06e-09!55;UBERON:0002365!4.60e-09!31;UBERON:0002330!4.60e-09!31;UBERON:0002417!2.03e-08!61;UBERON:0000916!2.03e-08!61;UBERON:0002368!5.19e-08!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.66e-15;19!UBERON:0006925;5.66e-15;19!UBERON:0002423;1.15e-11;25!UBERON:0002368;2.91e-09;33!UBERON:0005172;4.57e-09;52!UBERON:0005173;4.57e-09;52!UBERON:0002365;1.30e-08;31!UBERON:0002330;1.30e-08;31!UBERON:0000949;4.59e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.66e-15,19;UBERON:0006925,5.66e-15,19;UBERON:0008836,5.66e-15,19;UBERON:0008835,4.26e-13,22;UBERON:0003894,4.26e-13,22;UBERON:0009854,1.41e-12,23;UBERON:0005172,4.68e-12,54;UBERON:0005173,4.68e-12,54;UBERON:0007499,1.15e-11,25;UBERON:0009497,1.15e-11,25;UBERON:0000015,1.15e-11,25;UBERON:0002423,1.15e-11,25;UBERON:0006235,1.15e-11,25;UBERON:0004161,1.15e-11,25;UBERON:0009856,2.91e-11,26;UBERON:0002417,5.86e-11,60;UBERON:0000916,5.86e-11,60;UBERON:0002365,1.25e-09,31;UBERON:0002330,1.25e-09,31;UBERON:0002368,1.18e-08,35;UBERON:0000949,5.75e-07,45;UBERON:0005177,6.45e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709048640765013,1.15382201733633,1.3480708770837,0,0,0,0,0,0,0,0,0,0,0,5.20117668174708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@CRYAA | |||
}} |
Revision as of 14:02, 21 January 2014
Short description: | p6@CRYAA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CRYAA_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -23bp_to_ENST00000468016_5end |
EntrezGene: | CRYAA |
HGNC: | 2388 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.74e-23 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 5.66e-15 | 19 |
digestive gland | 5.66e-15 | 19 |
liver bud | 5.66e-15 | 19 |
hepatic diverticulum | 4.26e-13 | 22 |
liver primordium | 4.26e-13 | 22 |
digestive tract diverticulum | 1.41e-12 | 23 |
abdomen element | 4.68e-12 | 54 |
abdominal segment element | 4.68e-12 | 54 |
epithelial sac | 1.15e-11 | 25 |
epithelium of foregut-midgut junction | 1.15e-11 | 25 |
anatomical boundary | 1.15e-11 | 25 |
hepatobiliary system | 1.15e-11 | 25 |
foregut-midgut junction | 1.15e-11 | 25 |
septum transversum | 1.15e-11 | 25 |
sac | 2.91e-11 | 26 |
abdominal segment of trunk | 5.86e-11 | 60 |
abdomen | 5.86e-11 | 60 |
exocrine gland | 1.25e-09 | 31 |
exocrine system | 1.25e-09 | 31 |
endocrine gland | 1.18e-08 | 35 |
endocrine system | 5.75e-07 | 45 |
trunk region element | 6.45e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 7.07e-08 | 39 |