FFCP PHASE1:Hg19::chr22:33255285..33255302,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7078 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |||
|TSSclassifier=strong | |||
|UniProt=Q6LEP5 | |||
|association_with_transcript=-26bp_to_D45917_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_9_at_TIMP3_5end | |||
|id=chr22:33255285..33255302,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.04e-09!75;CL:0000055!6.60e-09!180;CL:0002334!6.90e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;8.62e-14;12!CL:0000327;8.49e-08;15!CL:0000136;8.70e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,6.11e-14,12;CL:0000057,1.98e-11,76;CL:0000136,9.09e-10,15;CL:0000327,2.31e-07,15;CL:0000134,9.87e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!4.06e-12!57;UBERON:0007023!6.56e-10!115;UBERON:0005631!5.94e-08!14;UBERON:0000158!5.94e-08!14;UBERON:0003102!6.83e-08!95;UBERON:0002199!8.92e-08!45;UBERON:0002416!8.92e-08!45;UBERON:0000475!1.92e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.03e-11;9!UBERON:0000042;6.03e-11;9!UBERON:0003688;6.55e-10;6!UBERON:0002358;6.55e-10;6!UBERON:0003684;6.55e-10;6!UBERON:0001178;6.55e-10;6!UBERON:0005631;8.73e-08;10!UBERON:0000158;8.73e-08;10!UBERON:0001013;9.04e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,9.40e-12,66;UBERON:0005631,2.37e-10,14;UBERON:0000158,2.37e-10,14;UBERON:0003688,6.92e-10,6;UBERON:0002358,6.92e-10,6;UBERON:0003684,6.92e-10,6;UBERON:0001178,6.92e-10,6;UBERON:0004457,1.13e-09,12;UBERON:0000042,1.13e-09,12;UBERON:0003124,1.02e-08,7;UBERON:0002199,2.29e-08,46;UBERON:0002416,2.29e-08,46;UBERON:0001013,6.64e-07,14;UBERON:0002384,6.96e-07,371 | |||
|phase1_expression=1.81678379270557,2.14100523890983,2.53717927372748,4.00293193412522,4.02264984984559,0.872338524100369,2.53299878168311,1.26343974685366,0,0.245733936501509,0.697801167972428,1.31064823278103,0.791300934685361,0.123766352960047,0,0,0,0,0,0,0.408001382488506,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,1.0843174571537,1.00267582127178,0.289693037921647,3.1811437882044,4.86634870302636,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0,0,0,0,4.96971951695318,0.633152558322899,0.662045904066094,5.44989579422746,1.41867352879343,0,0,1.97334038733728,0.311211035399766,0,0,0,0,0.937285727335186,0.936480230490962,0,0.298897361103602,0.117434498643765,0,0,0.204154171254893,0,0.413303124703062,1.18800285728205,1.23633464639278,0,0,0,0,0,0.438977620880838,0,0.901428353439581,0.113432183160021,1.61450672119976,0.427114777637135,1.90738711043606,1.80054657650641,1.23663035086127,1.8034837803194,1.30281799432113,2.02531598689519,1.55899208257918,1.51460264546469,0.828449087780694,3.23292113637624,1.77504796258307,1.0075209822764,0.508681776931463,0,0.272746120590835,0.860413786167011,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,1.92972281457866,1.38134921352481,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0.330881918197182,0,0,0.134831308160164,0,0.38474715694639,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0,0,0.651616610620649,0,0,0,0.117408694235822,0.288732895522148,0,0.951270761172991,0,0,0,0,0.148631162288728,0.93733833986777,0.16798212819886,0.283550194484773,0.268675568108545,0,0.383382679165211,2.95597942737566,0.880484340132261,2.48793738648926,2.59415916150531,2.27236380167484,0,0.763976851116555,0,0,0.822619941626588,4.20480280981484,0.285826432630578,1.12131084345361,1.30788020649984,0.66004457238855,1.55126058909333,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0.65147236858747,0.355391948742546,0,0,0.871533458600294,1.09970290300263,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0.271265023699736,0.415941723061614,0.356857977594324,0.315404830067869,0.468565659970853,1.80567659836631,6.82222512167955,1.03473071292505,0.664225598535437,0.184369168541703,1.82455590382974,0.587403472388222,2.40200396667599,0,0,0,0.909382714338778,1.66435439510497,1.81434175997808,1.48864684691266,1.68808170616869,2.24528075546459,2.43464383585832,6.14048698880044,2.2519548960105,1.48418066444991,2.92998418225046,7.45759246315134,0.98552587216571,2.07701771673448,3.25389059687886,0.483437798366489,0.802025881213139,0.0920809889358963,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0.784349769176855,0,0,0,0.510281115829547,0.431831832204279,0,0,0,0,0,0,0,0,1.28225062558195,0.656029291399411,1.62689197332152,1.54561517471583,0,0,0,0.650060246036521,0,0.676695028044854,0.308097234229289,0.15350367472613,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.178064071293475,0.165284915360978,0,0,0.2023155617111,1.39453664789186,7.55549632393536,0.6970372701606,0.308033580176089,1.06461206063404,0,0,0,0.744316738719335,0.316379424718726,0.190630193923825,2.04718233049067,3.42351190427136,0,0.78494864019923,0,0,0.117812402345686,0,0,0.421258456238981,0,5.11798328225697,20.0735278837835,0.682499557039929,0.989838023675989,0,1.65409603063837,0,1.75380354101505,0.578775534266688,1.31178950409327,0.405820753925408,0,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0.354761064070598,2.53329162357197,3.29294892959902,0.379473173765715,0.699869440489966,0,0.670302275535787,0,2.2594512186427,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,7.47191714286659,0,0,0,5.01363417949149,2.96964680832639,5.52889263778618,0,0.140669416410513,0,0,0.211125408127993,1.19548792950642,0.552567831062295,0,0.102268682502155,0,8.3980688668688,0,0,0,1.28236427328014,0,0,0,0.463840490809256,0,0,0,2.17499872630438,0.1137934482855,0,0.472775363535873,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0.658156191461918,0.21787692703798,0.278847488557207,2.00070672109872,0.113942055847001,0,0,0.434589487688032,18.5020672644513,19.2354946143911,65.5632774502921,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.442287822516696,0,0,0,0,0.337005664903385,0,0,0,0,0,1.18375320854817,1.20990716048664,0,1.64285107034069,0,0.103688191397247,0,0,0,0,0,0,0,0.195984794828755,0,6.46488672495512,0,0.0967563312890851,0.146178634172371,0,2.03676934625681,0,1.58186518546373,0,0,0,0,0,2.13452994739353,1.19885765749278,0,0,0.343189995723929,0,0,0.7070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| |||
|short_description=p9@TIMP3 | |||
}} |
Revision as of 15:30, 21 January 2014
Short description: | p9@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -26bp_to_D45917_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | Q6LEP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 6.11e-14 | 12 |
fibroblast | 1.98e-11 | 76 |
fat cell | 9.09e-10 | 15 |
extracellular matrix secreting cell | 2.31e-07 | 15 |
mesenchymal cell | 9.87e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 9.40e-12 | 66 |
extraembryonic membrane | 2.37e-10 | 14 |
membranous layer | 2.37e-10 | 14 |
omentum | 6.92e-10 | 6 |
peritoneum | 6.92e-10 | 6 |
abdominal cavity | 6.92e-10 | 6 |
visceral peritoneum | 6.92e-10 | 6 |
cavity lining | 1.13e-09 | 12 |
serous membrane | 1.13e-09 | 12 |
chorion | 1.02e-08 | 7 |
integument | 2.29e-08 | 46 |
integumental system | 2.29e-08 | 46 |
adipose tissue | 6.64e-07 | 14 |
connective tissue | 6.96e-07 | 371 |