FFCP PHASE1:Hg19::chr3:30226342..30226387,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C318 | |||
|description=CAGE_peak_at_chr3:30226342..30226387,- | |||
|id=chr3:30226342..30226387,- | |||
|ontology_enrichment_celltype=CL:0000569!1.36e-20!4;CL:0000011!1.36e-20!4;CL:0002494!6.99e-11!16;CL:0002595!3.67e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0002589;7.67e-18;2!CL:0000243;1.00e-08;15!CL:0000125;1.00e-08;15!CL:0002595;5.73e-08;5!CL:0000095;6.59e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002589,7.67e-18,2;CL:0000243,1.00e-08,15;CL:0000125,1.00e-08,15;CL:0000030,1.00e-08,15;CL:0000339,1.00e-08,15;CL:0002595,5.73e-08,5;CL:0000095,6.59e-08,17;CL:0000123,6.59e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0006238;6.11e-13;10!CL:0000339;1.00e-08;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;6.00e-12;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,6.00e-12,11 | |||
|ontology_enrichment_uberon=UBERON:0003834!3.67e-10!5;UBERON:0001533!3.67e-10!5;UBERON:0003914!1.32e-07!118;UBERON:0004872!1.37e-07!84;UBERON:0000948!4.70e-07!24;UBERON:0005498!4.70e-07!24;UBERON:0004140!4.70e-07!24;UBERON:0009881!4.70e-07!24;UBERON:0004141!4.70e-07!24;UBERON:0003084!4.70e-07!24;UBERON:0007005!4.70e-07!24;UBERON:0004139!4.70e-07!24;UBERON:0004291!4.70e-07!24;UBERON:0004573!8.56e-07!33;UBERON:0004571!8.56e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;7.67e-18;2!UBERON:0007204;7.67e-18;2!UBERON:0003834;5.73e-08;5!UBERON:0001533;5.73e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,7.67e-18,2;UBERON:0007204,7.67e-18,2;UBERON:0003834,5.73e-08,5;UBERON:0001533,5.73e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,2.00374841438788,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.731140468893853,0,0,0,0,0,4.64407282668854,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,1.08723364858891,1.67364554099733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6301680035929,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0.235265819698172,0,0,0,0,0,0,0,0,0.457680136793847,0.151230923763239,0.466311601748341,0.443565449968902,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:30226342..30226387,- | |||
}} |
Revision as of 17:59, 21 January 2014
Short description: | p@chr3:30226342..30226387, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:30226342..30226387, - |
Coexpression cluster: | C318_hepatoma_Intestinal_bile_small_colon_Prostate_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 7.67e-18 | 2 |
glial cell (sensu Vertebrata) | 1.00e-08 | 15 |
glial cell | 1.00e-08 | 15 |
glioblast | 1.00e-08 | 15 |
glioblast (sensu Vertebrata) | 1.00e-08 | 15 |
smooth muscle cell of the subclavian artery | 5.73e-08 | 5 |
neuron associated cell | 6.59e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 6.59e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 7.67e-18 | 2 |
brachiocephalic vasculature | 7.67e-18 | 2 |
thoracic segment blood vessel | 5.73e-08 | 5 |
subclavian artery | 5.73e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 6.00e-12 | 11 |