FFCP PHASE1:Hg19::chr3:69915369..69915381,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4286 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |||
|TSSclassifier=strong | |||
|UniProt=B4DNC7,O75030 | |||
|association_with_transcript=0bp_to_NM_198177_5end | |||
|coexpression_cluster_id=C1862 | |||
|description=CAGE_peak_4_at_MITF_5end | |||
|id=chr3:69915369..69915381,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.23e-13!254 | |||
|ontology_enrichment_celltype_v019=CL:0002586;3.04e-07;3!CL:1000507;7.59e-07;10!CL:1000494;7.59e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.54e-09,253;CL:0002586,2.72e-07,3;CL:1000507,5.73e-07,10;CL:1000494,5.73e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.04e-14;29 | |||
|ontology_enrichment_disease=DOID:305!1.23e-09!106;DOID:299!3.36e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;4.27e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.24e-13,106;DOID:299,5.56e-10,25;DOID:0050687,6.50e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.02e-11!347;UBERON:0001008!1.28e-11!45;UBERON:0000062!1.45e-11!511;UBERON:0006554!4.07e-11!44;UBERON:0004119!4.50e-11!169;UBERON:0000925!4.50e-11!169;UBERON:0006595!4.50e-11!169;UBERON:0004921!1.00e-10!129;UBERON:0004185!1.00e-10!129;UBERON:0001737!1.16e-10!9;UBERON:0001007!6.77e-10!155;UBERON:0001555!6.77e-10!155;UBERON:0007026!6.77e-10!155;UBERON:0003064!1.96e-09!37;UBERON:0000064!2.35e-09!219;UBERON:0000475!1.91e-08!365;UBERON:0007023!7.26e-08!115;UBERON:0005911!1.05e-07!82;UBERON:0000065!1.22e-07!53;UBERON:0008947!1.42e-07!38;UBERON:0003258!1.42e-07!38;UBERON:0000063!1.43e-07!97;UBERON:0000077!4.10e-07!130;UBERON:0002113!5.48e-07!27;UBERON:0003918!5.48e-07!27;UBERON:0005095!5.48e-07!27;UBERON:0007687!5.48e-07!27;UBERON:0003929!9.01e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.00e-20;9!UBERON:0001557;3.00e-20;9!UBERON:0000065;5.20e-09;44!UBERON:0000072;4.61e-08;37!UBERON:0001781;3.04e-07;3!UBERON:0001782;3.04e-07;3!UBERON:0002113;4.09e-07;24!UBERON:0011143;4.09e-07;24!UBERON:0000966;4.91e-07;5!UBERON:0005388;4.91e-07;5!UBERON:0001802;4.91e-07;5!UBERON:0004211;7.59e-07;10!UBERON:0009773;7.59e-07;10!UBERON:0001231;7.59e-07;10!UBERON:0004810;7.59e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.13e-20,9;UBERON:0008947,9.34e-10,38;UBERON:0003258,9.34e-10,38;UBERON:0000065,1.14e-08,54;UBERON:0001557,1.77e-08,19;UBERON:0002113,6.86e-08,26;UBERON:0003918,6.86e-08,26;UBERON:0011143,6.86e-08,26;UBERON:0005095,6.86e-08,26;UBERON:0007687,6.86e-08,26;UBERON:0001782,2.72e-07,3;UBERON:0005424,2.72e-07,3;UBERON:0002417,4.89e-07,60;UBERON:0000916,4.89e-07,60;UBERON:0004810,5.73e-07,10;UBERON:0001048,8.32e-07,160 | |||
|phase1_expression=0,0,0.422863212287913,2.00146596706261,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.434539556882471,0,0,1.32348744029695,0.221729397462564,1.31752178539689,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.515281080091258,0,0,0,0,0.0920498986422993,0,0,0,0.67824236924195,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,4.96888560167344,5.90046415273356,5.54325368732009,3.639701100169,4.13970943775572,4.27087114399974,3.50561401216427,5.101758093259,3.8474715694639,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.614942192715568,0.343135620597051,0,0,0,0.277765335475589,0,0,0,0.34779121492523,0.821860859650752,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,0.839910640994298,0.141775097242386,0,0,0,1.47798971368783,0,0,0.144119953416961,0,0,0.381988425558278,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,2.57360388584666,0,0,0,2.13235169245527,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.512556597022804,1.02341449813341,0,0,0,0.177561725313127,0,0,0,0,0.802025881213139,0.276242966807689,1.60740227430449,0.910455840033585,1.04899531967539,2.70719767744447,2.23344477602803,0.784349769176855,0,1.89992932007176,0,0,0.431831832204279,0,0,0.501689773854853,1.52925763827023,1.66215201785745,2.0148727924996,0,0,6.15480300279334,2.29610251989794,1.62689197332152,1.23649213977267,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,1.81813406897076,1.34533047155574,1.78657797492418,0.50578890427775,0.464845549297286,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0.539617372749944,1.09814811894422,0.471249609382746,0,0,0,0,0,0,0.272999822815972,0.565621727814851,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.192444225451024,0,0,1.22386941009813,0,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,2.99107399156925,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.449341755736634,4.29650819221462,0,0.493217028184668,0,0,0,0,0,0,0,0,0.568967241427498,0.508507300585533,0,0,0,0,1.77148277162768,1.92954301800653,0,0,0,0.219385397153973,7.51675398281032,6.55291598109435,0.153900517007594,0,0,0,0,1.27600463892768,0.915975934018623,2.13213910407454,0,0,0,0,0,0,0,0,4.43095935508857,24.321688415713,0,1.08194319871046,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0,0,0.586993856796269,0,0,1.20990716048664,0,0,0.450970258243478,0,0,0,0,0,6.26141001265544,0,1.04135843001079,0.195984794828755,0.261177619741208,1.7472666824203,0,4.16052224543066,3.87373380556783,3.36673373918158,0.387956065953678,0,0.90392296312213,0,0,0,0,0,2.34798294213288,0.39961921916426,0.144090417154106,0,2.23073497220554,0,0,0,3.53350935791397,4.70712808405499,1.52997326454483,0,1.20084057741958,0.136905378891993,0,0,0,0.558564802544508,2.7499250881402,0,0,0,1.11585728720936,6.51679683121245,0,0,0,0,0,8.85847333632739,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,13.6333873627613,18.6738333760593,0,0.35857467866569,4.41404953834724,0,1.98627591109629,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,2.9084762440336,3.52407511158336,0.854299300541557,1.57204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,1.99672292766334,0.124192805882767,0.138348634936231,0.499921631848426,0.909894705249887,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.906823702049089,0,0.244736704506468,0,0.617602894321944,0.219284049578707,0.176689145945881,0,0,47.4046809387701,2.41801239211839,2.73473960559644,0,0,0,0,0,2.45772908753719,4.43755459053117,0,0,0,0.567515953566836,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2061731150044,0.899209151350433,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,2.34454203369928,0,1.96526301012116,0.887136517302272,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0.894336993477167,1.07140367175657,0.672567444437648,1.21393120847326,4.09791944432336,0.354809480650555,0.115233987555779,0,0.135939465953663,0.131545547125698,0.827356886187777,0.111231401892069,0.313972371402056,1.41404030924402,0,0,4.53447941559105,0,1.85839014859306,0,0,0,0.801711364730253,0.207216164163037,0,0,0,0,0,0.423387050190929,0,1.24082554265728,0,32.326219789562,0,2.0726047246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| |||
|short_description=p4@MITF | |||
}} |
Revision as of 19:43, 21 January 2014
Short description: | p4@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MITF_5end |
Coexpression cluster: | C1862_mesothelioma_serous_clear_kidney_heart_hepatoma_cervical |
Association with transcript: | 0bp_to_NM_198177_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | B4DNC7O75030 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.54e-09 | 253 |
retinal pigment epithelial cell | 2.72e-07 | 3 |
kidney tubule cell | 5.73e-07 | 10 |
nephron tubule epithelial cell | 5.73e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.13e-20 | 9 |
respiratory primordium | 9.34e-10 | 38 |
endoderm of foregut | 9.34e-10 | 38 |
respiratory tract | 1.14e-08 | 54 |
upper respiratory tract | 1.77e-08 | 19 |
kidney | 6.86e-08 | 26 |
kidney mesenchyme | 6.86e-08 | 26 |
upper urinary tract | 6.86e-08 | 26 |
kidney rudiment | 6.86e-08 | 26 |
kidney field | 6.86e-08 | 26 |
pigmented layer of retina | 2.72e-07 | 3 |
presumptive retinal pigmented epithelium | 2.72e-07 | 3 |
abdominal segment of trunk | 4.89e-07 | 60 |
abdomen | 4.89e-07 | 60 |
nephron tubule epithelium | 5.73e-07 | 10 |
primordium | 8.32e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.24e-13 | 106 |
adenocarcinoma | 5.56e-10 | 25 |
cell type cancer | 6.50e-09 | 143 |