FFCP PHASE1:Hg19::chr3:108015351..108015365,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11148 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4905 | |||
|TSSclassifier=strong | |||
|UniProt=C9JD07 | |||
|association_with_transcript=-10bp_to_ENST00000467282_5end | |||
|coexpression_cluster_id=C2710 | |||
|description=CAGE_peak_2_at_HHLA2_5end | |||
|id=chr3:108015351..108015365,+ | |||
|ontology_enrichment_celltype=CL:0000840!9.51e-07!5;CL:0001029!9.51e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!3.25e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:2355;3.98e-14;1!DOID:0060060;6.65e-14;1!DOID:0060061;6.65e-14;1!DOID:8691;6.65e-14;1!DOID:74;1.05e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.98e-14,1;DOID:0060060,6.65e-14,1;DOID:0060061,6.65e-14,1;DOID:8691,6.65e-14,1;DOID:74,1.05e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!4.48e-11!27;UBERON:0000059!1.82e-09!11;UBERON:0005409!2.98e-08!35;UBERON:0004907!5.93e-08!5;UBERON:0001155!1.12e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.68e-24;17!UBERON:0002108;3.89e-23;4!UBERON:0005409;3.97e-19;22!UBERON:0002171;1.33e-13;1!UBERON:0006518;1.33e-13;1!UBERON:0008949;1.33e-13;1!UBERON:0000101;1.33e-13;1!UBERON:0002167;1.33e-13;1!UBERON:0004921;1.07e-11;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.72e-24,17;UBERON:0002108,3.47e-23,4;UBERON:0005409,6.93e-17,25;UBERON:0002171,1.42e-13,1;UBERON:0006518,1.42e-13,1;UBERON:0008949,1.42e-13,1;UBERON:0000101,1.42e-13,1;UBERON:0002167,1.42e-13,1;UBERON:0004921,2.01e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0.870627715885752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0.324547393654683,1.0447784237956,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58275720940538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.144004359897,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66866030566487,0,0.23874448473769,0,0,0,0,0,0.329607748453519,0,0,0.276283915531148,0,0,36.6792720273987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,1.41532103205343,1.22206028986725,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,16.9346664131569,0,0,0,0,0,0,0,0,0,1.81253126788156,0.472091293214983,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.640724475406168,2.82967749179399,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79982354196902,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840816489941367,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975343399858155,0,0,0,0.485710993059139,0,0,0,0,0,0,4.93914611890846,6.1196676941108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0,0,0,0,0,0.717222053926764,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@HHLA2 | |||
}} |
Revision as of 20:24, 21 January 2014
Short description: | p2@HHLA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HHLA2_5end |
Coexpression cluster: | C2710_b_acute_hereditary_small_lung_colon_mycosis |
Association with transcript: | -10bp_to_ENST00000467282_5end |
EntrezGene: | HHLA2 |
HGNC: | 4905 |
UniProt: | C9JD07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.72e-24 | 17 |
small intestine | 3.47e-23 | 4 |
gastrointestinal system | 6.93e-17 | 25 |
lower lobe of right lung | 1.42e-13 | 1 |
right lung lobe | 1.42e-13 | 1 |
lower lobe of lung | 1.42e-13 | 1 |
lobe of lung | 1.42e-13 | 1 |
right lung | 1.42e-13 | 1 |
subdivision of digestive tract | 2.01e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.98e-14 | 1 |
non-Hodgkin lymphoma | 6.65e-14 | 1 |
cutaneous T cell lymphoma | 6.65e-14 | 1 |
mycosis fungoides | 6.65e-14 | 1 |
hematopoietic system disease | 1.05e-07 | 2 |