FFCP PHASE1:Hg19::chr3:157160410..157160429,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C549 | |||
|description=CAGE_peak_at_chr3:157160410..157160429,+ | |||
|id=chr3:157160410..157160429,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.88e-33!180;CL:0000048!4.93e-27!430;CL:0000723!8.07e-26!436;CL:0000034!7.58e-25!444;CL:0000057!2.23e-24!75;CL:0000144!5.85e-21!625;CL:0002371!4.57e-20!591;CL:0000222!1.36e-19!119;CL:0000680!3.82e-19!57;CL:0000056!3.82e-19!57;CL:0000355!3.82e-19!57;CL:0000187!2.92e-17!54;CL:0000012!7.27e-16!682;CL:0000548!1.03e-15!679;CL:0000004!1.03e-15!679;CL:0000255!1.03e-15!679;CL:0000183!1.49e-15!59;CL:0000393!9.31e-15!60;CL:0000211!9.31e-15!60;CL:0000192!1.77e-11!42;CL:0000514!1.77e-11!42;CL:0002320!3.93e-11!365;CL:0000003!6.43e-11!722;CL:0000134!4.40e-10!358;CL:0000359!1.54e-09!32;CL:0002334!3.53e-09!12;CL:0000219!1.47e-08!390;CL:0002494!1.12e-07!16;CL:0002620!4.57e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.19e-09;12!CL:0002494;1.12e-08;16!CL:1000306;1.66e-07;4!CL:0002547;1.66e-07;4!CL:0000569;1.94e-07;4!CL:0000135;6.78e-07;3!CL:0000388;6.78e-07;3!CL:0000187;7.82e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,8.13e-23,427;CL:0000723,4.13e-22,433;CL:0000034,3.36e-21,441;CL:0000057,2.11e-17,76;CL:0000680,1.53e-11,58;CL:0000056,1.53e-11,58;CL:0000355,1.53e-11,58;CL:0000134,7.00e-11,354;CL:0002320,7.19e-11,361;CL:0000187,3.48e-10,55;CL:0002334,1.44e-09,12;CL:0000222,5.59e-09,121;CL:0000219,1.02e-08,386;CL:0000393,1.38e-08,61;CL:0000211,1.38e-08,61;CL:0002494,1.75e-08,16;CL:1000306,1.29e-07,4;CL:0002547,1.29e-07,4;CL:0000569,2.82e-07,4;CL:0000011,2.82e-07,4;CL:0000135,6.06e-07,3;CL:0000388,6.06e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000011;1.94e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!6.39e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.13e-18!83;UBERON:0002329!1.13e-18!83;UBERON:0003077!1.13e-18!83;UBERON:0003059!1.13e-18!83;UBERON:0007282!1.13e-18!83;UBERON:0009618!1.13e-18!83;UBERON:0007285!1.13e-18!83;UBERON:0001134!1.26e-18!61;UBERON:0002036!1.26e-18!61;UBERON:0003082!1.26e-18!61;UBERON:0004290!8.49e-18!70;UBERON:0002385!1.67e-17!63;UBERON:0001015!1.67e-17!63;UBERON:0000383!1.67e-17!63;UBERON:0002204!6.63e-17!167;UBERON:0000486!5.44e-16!82;UBERON:0002049!1.23e-15!79;UBERON:0007798!1.23e-15!79;UBERON:0004535!2.93e-14!110;UBERON:0000055!3.13e-14!69;UBERON:0001009!2.40e-13!113;UBERON:0004872!1.18e-12!84;UBERON:0001637!8.21e-12!42;UBERON:0003509!8.21e-12!42;UBERON:0004572!8.21e-12!42;UBERON:0002384!1.37e-11!375;UBERON:0001981!1.16e-10!60;UBERON:0007500!1.16e-10!60;UBERON:0004537!1.16e-10!60;UBERON:0006965!1.16e-10!60;UBERON:0000490!8.17e-09!138;UBERON:0005256!9.05e-09!143;UBERON:0000926!3.75e-08!448;UBERON:0004120!3.75e-08!448;UBERON:0006603!3.75e-08!448;UBERON:0004573!1.75e-07!33;UBERON:0004571!1.75e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.32e-09;9!UBERON:0000042;1.32e-09;9!UBERON:0003688;1.43e-07;6!UBERON:0002358;1.43e-07;6!UBERON:0003684;1.43e-07;6!UBERON:0001178;1.43e-07;6!UBERON:0004797;1.66e-07;4!UBERON:0000415;1.66e-07;4!UBERON:0007240;1.66e-07;4!UBERON:0005742;1.66e-07;4!UBERON:0005734;1.66e-07;4!UBERON:0004664;1.66e-07;4!UBERON:0004663;1.66e-07;4!UBERON:0002385;3.45e-07;31!UBERON:0001015;3.45e-07;31!UBERON:0000383;3.45e-07;31!UBERON:0000948;6.70e-07;22!UBERON:0007846;6.78e-07;3!UBERON:0000043;6.78e-07;3!UBERON:0007845;6.78e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.89e-14,315;UBERON:0004120,3.89e-14,315;UBERON:0006603,3.89e-14,315;UBERON:0002204,9.82e-12,167;UBERON:0002384,1.30e-10,371;UBERON:0004872,1.62e-10,83;UBERON:0001134,2.35e-10,62;UBERON:0002036,2.35e-10,62;UBERON:0003082,2.35e-10,62;UBERON:0002385,8.01e-10,64;UBERON:0001015,8.01e-10,64;UBERON:0000383,8.01e-10,64;UBERON:0004535,1.26e-09,109;UBERON:0007524,2.13e-09,73;UBERON:0000055,2.34e-09,68;UBERON:0001009,4.00e-09,112;UBERON:0002329,4.77e-09,71;UBERON:0003059,4.77e-09,71;UBERON:0007282,4.77e-09,71;UBERON:0004290,4.77e-09,71;UBERON:0009618,4.77e-09,71;UBERON:0003077,7.90e-09,72;UBERON:0007285,7.90e-09,72;UBERON:0000948,1.56e-08,24;UBERON:0005498,1.56e-08,24;UBERON:0004140,1.56e-08,24;UBERON:0009881,1.56e-08,24;UBERON:0004141,1.56e-08,24;UBERON:0003084,1.56e-08,24;UBERON:0007005,1.56e-08,24;UBERON:0004139,1.56e-08,24;UBERON:0004291,1.56e-08,24;UBERON:0000486,1.58e-08,83;UBERON:0007503,2.40e-08,78;UBERON:0001637,4.42e-08,42;UBERON:0003509,4.42e-08,42;UBERON:0004572,4.42e-08,42;UBERON:0002049,5.01e-08,78;UBERON:0007798,5.01e-08,78;UBERON:0000415,1.29e-07,4;UBERON:0007240,1.29e-07,4;UBERON:0005742,1.29e-07,4;UBERON:0005734,1.29e-07,4;UBERON:0004664,1.29e-07,4;UBERON:0004663,1.29e-07,4;UBERON:0003688,1.54e-07,6;UBERON:0002358,1.54e-07,6;UBERON:0003684,1.54e-07,6;UBERON:0001178,1.54e-07,6;UBERON:0007100,3.00e-07,27;UBERON:0007846,6.06e-07,3;UBERON:0000043,6.06e-07,3;UBERON:0007845,6.06e-07,3;UBERON:0004457,7.86e-07,12;UBERON:0000042,7.86e-07,12;UBERON:0003081,8.22e-07,203 | |||
|phase1_expression=2.72517568905835,13.4883330051319,3.10099689011137,7.00513088471913,0.893922188854576,10.4680622892044,0,1.89515962028049,0.783556884599516,0.245733936501509,0,0,0,0.495065411840187,0.331397375727916,1.34465029290355,0.602694528023977,1.46062018077475,1.95173119516203,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,0,0,0,0,0,0,0,0,1.23882548358041,0.575384784644301,0.512321413058201,0.47296445977717,4.48169384957604,1.29096936716765,5.41705946377367,0.564727018627814,0.545812300115692,0.449446968890169,1.83650335422542,0.320929027076094,2.55734850319616,0,0,1.27867425159808,5.5139755339431,1.70215567407342,1.86846674698672,0.251248665256743,2.08593167368081,0.434377689410233,9.6863920421339,2.20966581592539,5.06339819905415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.02290049474824,0.722878304769133,0.50133791063589,0.434539556882471,0,0.486634870302636,0,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,1.72046919021225,0,0,2.09749718104953,2.47606237746061,0.626984899610432,0.258416759169329,0.71153252537342,0.33472061276467,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0.446498641420399,0,0,0,0,0.366403487860815,0,0,0,3.97577561356255,3.16576279161449,1.98613771219828,8.3182620017156,2.12801029319014,0,0,1.48000529050296,0.933633106199299,5.92726957106628,2.94231425604226,0.605429710579726,0.576175924479999,3.51482147750695,0,0,0.896692083310806,0.469737994575059,1.61872944368132,0.561803226808994,0,1.10550885580591,0.929932030581889,0,2.22540236350701,1.82032272387605,5.74894513452991,0.168336113954066,0.375355559615893,0.554128230968366,0,2.75839016219118,0.751190294532984,2.38207584636044,0.179389635688862,2.13557388818567,5.93409323246773,1.20036438433761,1.23663035086127,1.54584324027377,2.23340227597908,0.168776332241266,0.584622030967192,0.252433774244115,1.84099797284599,0.646584227275248,0,0.403008392910561,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,8.8229906326076,5.77503585335668,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3032332212413,0,0,0,0.234817388471643,1.58803092537181,5.09284063834272,3.80508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,1.64648067356154,0,0,0.791951872933429,0.301439377059586,0,0.499864955910285,1.2162378064119,0,0,0.958499421966331,0,0,2.17171960001369,2.4657158706046,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,3.7977103317963,0,0.356857977594324,0,0.117141414992713,0,0,2.0694614258501,0,0.368738337083406,1.21637060255316,0,0,0,0,0,0,0,0,1.73675465473144,0.767309866440312,1.40330047216537,3.07533958213682,1.53512174720011,3.53878626515936,7.42090332224955,0.925258162815933,1.06537035187876,0.0821271560138091,2.59627214591811,1.04589340613963,0,0,0.0920809889358963,1.26295892981067,2.73136752010076,0.393373244878272,0,0,0,0,0,0,1.02056223165909,0.431831832204279,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,4.82051789532479,0.773365746336976,2.15668063960502,2.14905144616581,1.65403886981437,1.50388342815583,3.0453505721988,1.78975917573812,0.534192213880424,0,0,0,0,0,5.03699754929024,0,0.924100740528266,0.532306030317022,0,0,1.00187420719394,0.372158369359667,0,0.38126038784765,0.255897791311334,2.1396949401696,0.636406495851874,0.78494864019923,0.719489830333259,4.11805544604082,2.12062324222236,1.01091240786658,0,0.842516912477962,0,14.1353823986145,0,0,1.27264888758341,1.13008116620243,0.551365343546124,0.66343897524122,1.75380354101505,0.578775534266688,1.31178950409327,0.202910376962704,0.92947049429925,1.69017361519345,0.430234056612155,1.67023369722306,0.35667105148125,0,6.96655196482292,24.3678220790327,1.13841952129715,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.627617077873999,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.979762080328227,0,0,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655745261419609,0,0,0,0,0,0,0,0,0.124980407962107,0,0,2.35265819698172,0,0,0.895528817321244,2.10341978862502,3.88364103051829,0.947015026375446,3.77351852628863,3.55924488638614,13.9592441722123,8.16646988321491,1.08806040407946,1.33069634990671,1.43367090447332,2.24901556081802,0.155262956876259,4.56176828624941,5.84851772027589,0.521745061811734,0.300515217994437,1.904026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| |||
|short_description=p@chr3:157160410..157160429,+ | |||
}} |
Revision as of 22:16, 21 January 2014
Short description: | p@chr3:157160410..157160429, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:157160410..157160429, + |
Coexpression cluster: | C549_mesenchymal_Fibroblast_Synoviocyte_Hair_Smooth_Preadipocyte_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 8.13e-23 | 427 |
somatic stem cell | 4.13e-22 | 433 |
stem cell | 3.36e-21 | 441 |
fibroblast | 2.11e-17 | 76 |
muscle precursor cell | 1.53e-11 | 58 |
myoblast | 1.53e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.53e-11 | 58 |
mesenchymal cell | 7.00e-11 | 354 |
connective tissue cell | 7.19e-11 | 361 |
muscle cell | 3.48e-10 | 55 |
preadipocyte | 1.44e-09 | 12 |
mesodermal cell | 5.59e-09 | 121 |
motile cell | 1.02e-08 | 386 |
electrically responsive cell | 1.38e-08 | 61 |
electrically active cell | 1.38e-08 | 61 |
cardiocyte | 1.75e-08 | 16 |
fibroblast of tunica adventitia of artery | 1.29e-07 | 4 |
fibroblast of the aortic adventitia | 1.29e-07 | 4 |
cardiac mesenchymal cell | 2.82e-07 | 4 |
migratory trunk neural crest cell | 2.82e-07 | 4 |
fibrocyte | 6.06e-07 | 3 |
tendon cell | 6.06e-07 | 3 |