FFCP PHASE1:Hg19::chr4:1165666..1165705,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10417 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-253bp_to_ENST00000507466_5end | |||
|coexpression_cluster_id=C574 | |||
|description=CAGE_peak_7_at_SPON2_5end | |||
|id=chr4:1165666..1165705,- | |||
|ontology_enrichment_celltype=CL:0000136!4.84e-14!15;CL:0000048!2.59e-11!430;CL:0000723!1.10e-10!436;CL:0002334!2.91e-10!12;CL:0000034!2.99e-10!444;CL:0000055!8.14e-10!180;CL:0000057!3.01e-09!75;CL:0002570!4.75e-09!8;CL:0000325!1.06e-08!39;CL:0000219!8.01e-08!390;CL:0002320!8.48e-08!365;CL:0000134!1.24e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.72e-13;13!CL:0002334;5.74e-13;12!CL:0002570;2.90e-11;8!CL:0000134;9.90e-10;55!CL:0000723;1.13e-09;61!CL:0002615;1.36e-09;3!CL:0002622;2.07e-09;3!CL:0002579;2.85e-09;3!CL:0002521;3.55e-09;3!CL:0000048;4.47e-09;58!CL:0002504;5.33e-09;3!CL:1000279;5.33e-09;3!CL:1000280;5.33e-09;3!CL:0002567;1.95e-08;3!CL:0000034;7.15e-08;69!CL:0002617;4.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.13e-17,15;CL:0002334,1.11e-12,12;CL:0002570,3.56e-11,8;CL:0000048,1.10e-10,427;CL:0000723,2.49e-10,433;CL:0000034,7.15e-10,441;CL:0002615,1.58e-09,3;CL:0002622,1.72e-09,3;CL:0002521,2.27e-09,3;CL:0002579,3.07e-09,3;CL:0002504,5.15e-09,3;CL:1000279,5.15e-09,3;CL:1000280,5.15e-09,3;CL:0002567,1.62e-08,3;CL:0000219,1.67e-08,386;CL:0002320,3.01e-08,361;CL:0000134,4.29e-08,354;CL:0002617,4.89e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.38e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.54e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.41e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001013!1.46e-10!14;UBERON:0003688!1.52e-08!6;UBERON:0002358!1.52e-08!6;UBERON:0003684!1.52e-08!6;UBERON:0001178!1.52e-08!6;UBERON:0002384!1.53e-07!375;UBERON:0002100!8.84e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.71e-17;6!UBERON:0002358;3.71e-17;6!UBERON:0003684;3.71e-17;6!UBERON:0001178;3.71e-17;6!UBERON:0001013;6.09e-14;14!UBERON:0004457;3.75e-11;9!UBERON:0000042;3.75e-11;9!UBERON:0002190;3.55e-09;3!UBERON:0002072;5.19e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.61e-17,6;UBERON:0002358,4.61e-17,6;UBERON:0003684,4.61e-17,6;UBERON:0001178,4.61e-17,6;UBERON:0001013,5.59e-14,14;UBERON:0002190,2.27e-09,3;UBERON:0002072,5.06e-09,5;UBERON:0004457,4.17e-08,12;UBERON:0000042,4.17e-08,12;UBERON:0002384,1.07e-07,371 | |||
|phase1_expression=13.0808433074801,5.78071414505655,8.45726424575827,3.00219895059391,12.5149106439641,0,10.1319951267324,8.84407822797563,1.82829939739887,0,0,0,0.263766978228454,0.990130823680373,1.32558950291166,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0,0,0,0.821127996921047,0.403213486449465,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14734648299525,0,0,0,0,0.622422070799533,0,0.163461903113459,0.151357427644931,0.576175924479999,0,3.74592092196385,0,0.747243402759005,0,0.161872944368132,0.421352420106746,0,0,0.103325781175765,5.94001428641027,2.47266929278557,0,7.90479955997862,0,0,0,0,0.30648779579902,0.600952235626387,0.113432183160021,0.179389635688862,0,0,0.600182192168805,0.515262646192195,0,0.18611685633159,0,0,0,0.0920498986422993,0.484938170456436,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0.928735856063958,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,1.26755034821831,1.96565443335525,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,4.20187268114105,1.17217447210047,1.71072446022705,0.102827492703324,2.10240140490742,0,0,0,0,2.58543431515556,10.7296933755565,1.690605505112,10.9034627799797,5.2003718455683,0,0,0,0.714889968290738,7.5967024754802,1.64648067356154,0.65147236858747,0,0.791951872933429,0,0,0,0,0.502257091432126,0,0,0,0,0.289562613335158,0,0,0,1.37921532141349,0.431255149719035,0.641715181398742,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,1.39013783148933,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,1.66435439510497,0,4.71404834855676,0.153461973288062,1.40330047216537,6.15067916427365,3.07024349440022,3.37793234401576,0,0.462629081407967,1.06537035187876,0.657017248110473,1.03850885836724,1.16210378459959,0,0,0,3.90369123759663,3.82391452814106,20.1931599037513,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0.290012154876366,0.154048617114644,0.460511024178389,0.137836572484531,1.07420244868274,0.290033387828457,0.255679882248303,0.445160178233687,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,4.19386426632415,1.535386747868,0.42793898803392,0.318203247925937,0,2.87795932133304,3.0199073270966,3.88780927740765,0,0,0,1.46290121726877,0,0,1.63799893689583,18.0998952900752,0,0,0,0,2.89387767133344,1.9676842561399,0,0,0,0.573645408816206,0.196498082026242,0,0.354761064070598,0.844430541190656,0,0,1.04980416073495,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0.593929361665277,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0.663475559587348,0.295547618953547,0,0,0,1.07730361905316,0,0,0,0,0,4.1218917030838,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.775912131907355,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0,0,0,1.17241786942466,0,0,0,0,0,0.533937062838473,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0.2506898940227,0.919036730290385,0.327872630709804,0,0,0,0,0,0.332787154610557,0,0.138348634936231,0,0,0.856396000634902,0,0,0,0.447764408660622,1.63599316893057,1.10961172300523,0,0.754703705257725,1.77962244319307,0.228840068396924,2.87338755150154,0,0,0.159296767163702,1.79921244865442,0,0.829412415681711,1.59505028734797,5.73919567992907,1.50257608997218,1.14241563650639,0,1.09109195521536,0,1.39210127963548,6.36953421917786,0,1.03018711554838,3.36749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,3.3687002508852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0.443511850813194,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,2.40513409419076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0.909344378618873,0,0,0,0,0,0,0.0620747142958579,0,0.12729431655633,0,1.08858373948481,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p7@SPON2 | |||
}} |
Revision as of 23:47, 21 January 2014
Short description: | p7@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SPON2_5end |
Coexpression cluster: | C574_Mesenchymal_Fibroblast_Smooth_Prostate_Adipocyte_Hair_mesenchymal |
Association with transcript: | -253bp_to_ENST00000507466_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.13e-17 | 15 |
preadipocyte | 1.11e-12 | 12 |
mesenchymal stem cell of adipose | 3.56e-11 | 8 |
multi fate stem cell | 1.10e-10 | 427 |
somatic stem cell | 2.49e-10 | 433 |
stem cell | 7.15e-10 | 441 |
adipocyte of omentum tissue | 1.58e-09 | 3 |
prostate stromal cell | 1.72e-09 | 3 |
subcutaneous fat cell | 2.27e-09 | 3 |
omentum preadipocyte | 3.07e-09 | 3 |
enteric smooth muscle cell | 5.15e-09 | 3 |
smooth muscle cell of large intestine | 5.15e-09 | 3 |
smooth muscle cell of colon | 5.15e-09 | 3 |
light melanocyte | 1.62e-08 | 3 |
motile cell | 1.67e-08 | 386 |
connective tissue cell | 3.01e-08 | 361 |
mesenchymal cell | 4.29e-08 | 354 |
adipocyte of breast | 4.89e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.61e-17 | 6 |
peritoneum | 4.61e-17 | 6 |
abdominal cavity | 4.61e-17 | 6 |
visceral peritoneum | 4.61e-17 | 6 |
adipose tissue | 5.59e-14 | 14 |
subcutaneous adipose tissue | 2.27e-09 | 3 |
hypodermis | 5.06e-09 | 5 |
cavity lining | 4.17e-08 | 12 |
serous membrane | 4.17e-08 | 12 |
connective tissue | 1.07e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.41e-10 | 14 |