FFCP PHASE1:Hg19::chr4:70866639..70866649,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6779 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11369 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=141bp_to_ENST00000506576_5end | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_4_at_STATH_5end | |||
|id=chr4:70866639..70866649,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;9.91e-41;1!UBERON:0008801;1.48e-40;1!UBERON:0008814;6.30e-21;2!UBERON:0010056;6.30e-21;2!UBERON:0006601;4.50e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!1.89e-37!2;UBERON:0003127!2.93e-36!2;UBERON:0000078!5.19e-36!18;UBERON:0000166!7.05e-31!21;UBERON:0001044!4.10e-28!6;UBERON:0003293!4.10e-28!6;UBERON:0003294!4.10e-28!6;UBERON:0010047!4.10e-28!6;UBERON:0000167!4.10e-28!6;UBERON:0001723!7.93e-25!3;UBERON:0001033!7.93e-25!3;UBERON:0010056!7.93e-25!3;UBERON:0000165!3.62e-23!28;UBERON:0000930!3.62e-23!28;UBERON:0001736!1.08e-19!1;UBERON:0006298!1.08e-19!1;UBERON:0001831!1.30e-19!1;UBERON:0001567!1.30e-19!1;UBERON:0008801!1.30e-19!1;UBERON:0000989!2.25e-19!1;UBERON:0008811!2.25e-19!1;UBERON:0006258!2.25e-19!1;UBERON:0005876!2.25e-19!1;UBERON:0004874!2.25e-19!1;UBERON:0002372!2.71e-19!1;UBERON:0001961!2.71e-19!1;UBERON:0001744!2.71e-19!1;UBERON:0001735!2.71e-19!1;UBERON:0000161!1.57e-18!35;UBERON:0003408!3.59e-17!10;UBERON:0001042!8.57e-17!10;UBERON:0009145!8.57e-17!10;UBERON:0001004!1.40e-15!72;UBERON:0006562!2.49e-15!11;UBERON:0001444!1.72e-13!48;UBERON:0001041!2.51e-11!98;UBERON:0003126!4.06e-11!7;UBERON:0001005!4.06e-11!7;UBERON:0004089!1.72e-10!2;UBERON:0000341!1.89e-10!2;UBERON:0000072!8.37e-10!46;UBERON:0007023!1.23e-09!115;UBERON:0001557!3.83e-09!19;UBERON:0000065!1.63e-08!53;UBERON:0000077!2.08e-08!130;UBERON:0004921!2.08e-08!129;UBERON:0004185!2.08e-08!129;UBERON:0001007!6.57e-07!155;UBERON:0001555!6.57e-07!155;UBERON:0007026!6.57e-07!155;UBERON:0003104!6.91e-07!238;UBERON:0009142!6.91e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.34e-79;2!UBERON:0001044;8.14e-60;6!UBERON:0003293;8.14e-60;6!UBERON:0003294;8.14e-60;6!UBERON:0010047;8.14e-60;6!UBERON:0003408;8.14e-60;6!UBERON:0000167;8.14e-60;6!UBERON:0001736;9.91e-41;1!UBERON:0001831;1.48e-40;1!UBERON:0001567;1.48e-40;1!UBERON:0001041;2.90e-26;14!UBERON:0000165;2.89e-23;28!UBERON:0004089;4.66e-21;2!UBERON:0000341;6.30e-21;2!UBERON:0000161;1.31e-19;19!UBERON:0000166;1.31e-19;19!UBERON:0001723;1.96e-14;3!UBERON:0001033;1.96e-14;3!UBERON:0007811;4.04e-14;52!UBERON:0000153;4.16e-13;54!UBERON:0002365;4.20e-12;31!UBERON:0002330;4.20e-12;31!UBERON:0004921;3.59e-10;33!UBERON:0001555;1.85e-08;54!UBERON:0000033;3.12e-08;50!UBERON:0000974;7.01e-08;6!UBERON:0001444;2.65e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.34e-79,2;UBERON:0001044,8.15e-60,6;UBERON:0003293,8.15e-60,6;UBERON:0003294,8.15e-60,6;UBERON:0010047,8.15e-60,6;UBERON:0000167,8.15e-60,6;UBERON:0001736,9.91e-41,1;UBERON:0006298,9.91e-41,1;UBERON:0001831,1.48e-40,1;UBERON:0001567,1.48e-40,1;UBERON:0008801,1.48e-40,1;UBERON:0003408,2.40e-36,10;UBERON:0000166,2.36e-29,22;UBERON:0000165,1.76e-22,29;UBERON:0000930,1.76e-22,29;UBERON:0004089,4.66e-21,2;UBERON:0000341,5.70e-21,2;UBERON:0000161,2.87e-18,36;UBERON:0000153,1.38e-16,62;UBERON:0007811,1.38e-16,62;UBERON:0001723,2.09e-14,3;UBERON:0001033,2.09e-14,3;UBERON:0010056,2.09e-14,3;UBERON:0001444,1.27e-13,49;UBERON:0002365,2.30e-12,31;UBERON:0002330,2.30e-12,31;UBERON:0000033,5.21e-12,56;UBERON:0007023,2.58e-09,114;UBERON:0001004,3.00e-09,74;UBERON:0001041,5.87e-08,87;UBERON:0003102,4.61e-07,99;UBERON:0002530,7.38e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.5013854217188,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,132.079799157825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,120.18707225199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41174371041569,0,0,0,0,0,0,3.26575121845442,0.342233301085281,0.471464371102113,0.358611026963382,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@STATH | |||
}} |
Revision as of 01:19, 22 January 2014
Short description: | p4@STATH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_STATH_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 141bp_to_ENST00000506576_5end |
EntrezGene: | STATH |
HGNC: | 11369 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.34e-79 | 2 |
saliva-secreting gland | 8.15e-60 | 6 |
gland of oral region | 8.15e-60 | 6 |
gland of foregut | 8.15e-60 | 6 |
oral gland | 8.15e-60 | 6 |
oral cavity | 8.15e-60 | 6 |
submandibular gland | 9.91e-41 | 1 |
submandibular gland primordium | 9.91e-41 | 1 |
parotid gland | 1.48e-40 | 1 |
cheek | 1.48e-40 | 1 |
parotid gland primordium | 1.48e-40 | 1 |
gland of gut | 2.40e-36 | 10 |
oral opening | 2.36e-29 | 22 |
mouth | 1.76e-22 | 29 |
stomodeum | 1.76e-22 | 29 |
midface | 4.66e-21 | 2 |
throat | 5.70e-21 | 2 |
orifice | 2.87e-18 | 36 |
anterior region of body | 1.38e-16 | 62 |
craniocervical region | 1.38e-16 | 62 |
tongue | 2.09e-14 | 3 |
gustatory system | 2.09e-14 | 3 |
future tongue | 2.09e-14 | 3 |
subdivision of head | 1.27e-13 | 49 |
exocrine gland | 2.30e-12 | 31 |
exocrine system | 2.30e-12 | 31 |
head | 5.21e-12 | 56 |
adult organism | 2.58e-09 | 114 |
respiratory system | 3.00e-09 | 74 |
foregut | 5.87e-08 | 87 |
surface structure | 4.61e-07 | 99 |
gland | 7.38e-07 | 59 |