FFCP PHASE1:Hg19::chr4:72897809..72897820,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10886 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4525 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=288bp_to_uc010iig.1_5end | |||
|coexpression_cluster_id=C145 | |||
|description=CAGE_peak_4_at_NPFFR2_5end | |||
|id=chr4:72897809..72897820,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.04e-10;3!CL:0000306;2.35e-08;4!CL:0002222;2.35e-08;4!CL:0002224;2.35e-08;4!CL:0000333;4.79e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,9.90e-11,3;CL:0000306,2.43e-08,4;CL:0002222,2.43e-08,4;CL:0002224,2.43e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;9.99e-30;1!DOID:4549;9.99e-30;1!DOID:5861;9.99e-30;1!DOID:6496;9.99e-30;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.99e-30,1;DOID:4549,9.99e-30,1;DOID:5861,9.99e-30,1;DOID:6496,9.99e-30,1 | |||
|ontology_enrichment_uberon=UBERON:0002619!1.72e-15!22;UBERON:0001869!1.46e-14!32;UBERON:0001950!3.48e-14!20;UBERON:0001893!1.46e-13!34;UBERON:0000956!1.94e-13!25;UBERON:0000203!1.94e-13!25;UBERON:0002020!2.04e-13!34;UBERON:0003528!2.04e-13!34;UBERON:0003056!2.93e-13!61;UBERON:0003075!6.38e-12!86;UBERON:0007284!6.38e-12!86;UBERON:0002791!8.99e-12!33;UBERON:0002346!3.52e-11!90;UBERON:0002780!8.03e-11!41;UBERON:0001890!8.03e-11!41;UBERON:0006240!8.03e-11!41;UBERON:0003080!1.67e-10!42;UBERON:0001049!9.13e-10!57;UBERON:0005068!9.13e-10!57;UBERON:0006241!9.13e-10!57;UBERON:0007135!9.13e-10!57;UBERON:0000200!1.56e-09!6;UBERON:0005743!2.25e-09!86;UBERON:0002616!2.50e-09!59;UBERON:0000073!2.95e-09!94;UBERON:0001016!2.95e-09!94;UBERON:0000153!5.38e-09!129;UBERON:0007811!5.38e-09!129;UBERON:0001017!6.82e-09!82;UBERON:0000064!3.84e-08!219;UBERON:0007023!7.13e-08!115;UBERON:0000955!2.22e-07!69;UBERON:0006238!2.22e-07!69;UBERON:0004121!4.53e-07!169;UBERON:0001871!5.38e-07!7;UBERON:0000349!5.65e-07!5;UBERON:0001872!7.07e-07!5;UBERON:0000033!7.26e-07!123;UBERON:0000924!8.82e-07!173;UBERON:0006601!8.82e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;7.42e-11;3!UBERON:0004755;7.42e-11;3!UBERON:0001987;2.35e-08;4!UBERON:0010077;2.35e-08;4!UBERON:0005389;2.35e-08;4!UBERON:0000484;2.35e-08;4!UBERON:0000965;2.35e-08;4!UBERON:0001803;2.35e-08;4!UBERON:0000013;4.79e-07;5!UBERON:0002410;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,7.42e-11,3;UBERON:0004755,7.42e-11,3;UBERON:0001987,2.26e-08,4;UBERON:0004340,2.26e-08,4;UBERON:0010077,2.43e-08,4;UBERON:0005389,2.43e-08,4;UBERON:0000484,2.43e-08,4;UBERON:0002546,2.43e-08,4;UBERON:0000965,2.43e-08,4;UBERON:0001803,2.43e-08,4;UBERON:0003073,2.43e-08,4;UBERON:0005426,2.43e-08,4;UBERON:0000013,4.79e-07,5;UBERON:0002410,4.79e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.15403067420883,0,0,0.527758144464379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0.296964680832639,0,0,0.703347082052564,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.53095337517102,0.225980740780532,0,0.397429223405979,0.0633107959558787,0,0,0,0,0,0,2.05913997434357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.275078873194468,0.415440338029185,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,7.86329709279482,0,0,0,0,0,0,0,0,0,0.3062454773532,0.321146125482298,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.380494861163441,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.263091094251396,0,0,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,1.14553434272025,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0.504665699340316,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0,0,0.23806443146374,0.258355639344024,0.372448285775147,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p4@NPFFR2 | |||
}} |
Revision as of 01:27, 22 January 2014
Short description: | p4@NPFFR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NPFFR2_5end |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | 288bp_to_uc010iig.1_5end |
EntrezGene: | NPFFR2 |
HGNC: | 4525 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 9.90e-11 | 3 |
crystallin accumulating cell | 2.43e-08 | 4 |
vertebrate lens cell | 2.43e-08 | 4 |
lens epithelial cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 7.42e-11 | 3 |
skeletal tissue | 7.42e-11 | 3 |
placenta | 2.26e-08 | 4 |
allantois | 2.26e-08 | 4 |
cuboidal epithelium | 2.43e-08 | 4 |
transparent eye structure | 2.43e-08 | 4 |
simple cuboidal epithelium | 2.43e-08 | 4 |
cranial placode | 2.43e-08 | 4 |
lens of camera-type eye | 2.43e-08 | 4 |
epithelium of lens | 2.43e-08 | 4 |
lens placode | 2.43e-08 | 4 |
lens vesicle | 2.43e-08 | 4 |
sympathetic nervous system | 4.79e-07 | 5 |
autonomic nervous system | 4.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.99e-30 | 1 |
extraosseous chondrosarcoma | 9.99e-30 | 1 |
myxoid chondrosarcoma | 9.99e-30 | 1 |
extraskeletal myxoid chondrosarcoma | 9.99e-30 | 1 |