FFCP PHASE1:Hg19::chr4:107237688..107237717,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9255 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10648 | |||
|TSSclassifier=strong | |||
|UniProt=Q12904 | |||
|association_with_transcript=24bp_to_ENST00000394701,NM_001142416,uc003hyh.2_5end | |||
|description=CAGE_peak_1_at_AIMP1_5end | |||
|id=chr4:107237688..107237717,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.54e-15!172;CL:0000566!1.54e-15!172;CL:0002032!4.65e-14!165;CL:0000837!4.65e-14!165;CL:0000988!5.51e-14!182;CL:0000542!1.85e-12!53;CL:0000051!1.85e-12!53;CL:0000838!4.31e-12!52;CL:0002087!8.20e-12!119;CL:0002031!1.20e-11!124;CL:0000063!1.31e-11!578;CL:0000738!5.27e-11!140;CL:0000134!1.59e-09!358;CL:0000003!2.86e-09!722;CL:0002320!1.44e-08!365;CL:0000012!1.49e-07!682;CL:0000219!2.51e-07!390;CL:0000548!2.59e-07!679;CL:0000004!2.59e-07!679;CL:0000255!2.59e-07!679;CL:0000791!3.33e-07!18;CL:0000789!3.33e-07!18;CL:0002420!3.33e-07!18;CL:0002419!3.33e-07!18;CL:0000790!3.33e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.86e-07;53!CL:0000791;3.51e-07;18!CL:0000789;3.51e-07;18!CL:0002419;3.51e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.03e-15,168;CL:0000988,4.83e-14,177;CL:0002032,1.19e-13,161;CL:0000837,1.19e-13,161;CL:0000542,1.85e-12,53;CL:0000051,1.85e-12,53;CL:0000838,4.31e-12,52;CL:0002087,1.94e-11,115;CL:0002031,2.84e-11,120;CL:0000738,1.26e-10,136;CL:0000134,2.37e-09,354;CL:0002320,2.11e-08,361;CL:0000791,3.33e-07,18;CL:0000789,3.33e-07,18;CL:0002420,3.33e-07,18;CL:0002419,3.33e-07,18;CL:0000790,3.33e-07,18;CL:0000219,3.60e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000051;2.86e-07;53!CL:0000790;3.51e-07;18 | |||
|ontology_enrichment_disease=DOID:162!1.94e-21!235;DOID:14566!1.05e-20!239;DOID:305!3.06e-12!106;DOID:0050687!7.13e-12!143;DOID:0050686!2.01e-10!137;DOID:2531!1.55e-08!51;DOID:0060083!1.55e-08!51;DOID:1240!1.22e-07!39;DOID:8692!5.67e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.94e-21,235;DOID:14566,1.05e-20,239;DOID:305,3.06e-12,106;DOID:0050687,7.13e-12,143;DOID:0050686,2.01e-10,137;DOID:2531,1.55e-08,51;DOID:0060083,1.55e-08,51;DOID:1240,1.22e-07,39;DOID:8692,5.67e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.74e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.57e-09,371 | |||
|phase1_expression=66.1309300544826,48.6008189232532,67.3762051578742,41.0300523247835,45.5900316315834,31.4041868676133,40.5279805069297,36.6397526587562,28.7304191019822,14.7440361900905,4.88460817580699,13.1064823278103,11.078213085595,48.5164103603383,28.8315716883287,40.3395087871065,37.9697552655105,40.1670549713055,39.5225567020311,15.3901322595985,7.34402488479311,5.32873026512749,40.359274185479,31.3442433416905,40.5502725891213,71.6757745915783,74.218932862751,78.8682028763066,38.5496991311926,82.5233205909007,56.1982527637356,60.6818008156092,7.228942050678,23.2945026405076,81.3405606093167,92.410001116824,50.4992755655937,59.8315041214428,44.9219562333117,43.4021741431704,36.7221377753476,36.5999842601447,38.636335145128,34.750179068316,44.2114854115907,43.9077150749947,37.8859330156266,47.6954750105318,59.1539168409648,51.7846306179871,68.3949086432699,84.6606383001135,43.7827014535506,69.7123458270532,60.9419189674538,38.4014372666914,52.9437931112221,64.0461930668491,42.5456610395555,73.8136762275015,56.2616670703156,36.9433456209122,53.4562602425973,51.573194814456,46.4334781805734,68.0862269629368,66.0191583935309,47.7372463987812,57.3631210262222,79.7083060067778,39.9563671738023,81.7576351892394,74.3686610486078,95.9098999856216,87.5929715855979,88.8952656955514,74.9231969747122,81.2456990272549,94.0244682177919,69.5431094728647,89.3135880623915,87.313465499495,49.2789484491704,62.8059402951451,73.829268070675,76.3847098394048,85.6847412257067,64.9470257148566,78.0032949886137,70.5999778356169,61.4750006638204,54.6130586114973,64.9864487812889,51.5468181458201,59.9744162390244,56.6275782266416,139.270517240594,79.7811848380804,84.0910130907993,84.4291801722924,130.368906653436,111.260234347662,97.4133642039557,74.1993642855256,133.751081993576,114.976091288899,123.486561876847,49.4432494141106,59.1770031397446,43.5760447199742,42.8342527568065,86.3613195490456,118.184390840162,124.674025889806,82.5830638059317,65.3794907364957,110.750722650955,97.5901945170669,129.546082313985,69.7658257369772,72.9213468319189,68.4325472002829,77.9979116822863,81.0155248607468,77.4570504624544,62.2724172875764,55.8367037906312,90.3198209646801,59.3717234639386,81.8257881937814,48.7613732627923,38.2299490031073,57.0267025822145,64.3361691244528,37.0990053870558,54.4622911292697,74.7568790228033,37.9575198836056,53.5067065148624,41.2416679280369,36.6271056340336,17.6821751921912,12.750335090239,13.3482399402395,45.112087718001,40.7463585280285,33.2394901297163,82.0407747610376,103.531078851203,99.5506103563234,28.8205490681722,25.8070378531837,19.0927275884177,18.0898541415683,23.0724689915448,42.9184145426505,19.4365318879234,42.6387652629393,50.8745755641996,52.8858568168179,15.3075140501476,32.691700545896,12.4471649349566,45.5902219628877,20.253548697044,59.5629187654812,43.5586982894769,51.1256121394283,10.7321646226118,16.1375162126582,19.9689900884144,22.4026709641308,27.1446184903828,9.59406914713576,56.6548024932663,62.9353642972961,83.4177839123278,54.7857945630234,47.5255632145798,19.6237160049807,19.2148192313469,30.5867760037278,52.5946649825605,51.0553447144118,44.6250995499742,14.6816704815583,33.4182036198399,20.8546074332079,51.5064126770029,25.1007601479558,46.6279883321619,50.966572411394,60.3786082493131,55.8994210674949,68.799955712899,41.272330616754,55.1759671478587,64.1521542932309,42.0353779773547,18.2032272387605,3.59309070908119,58.580967656015,47.5450375513464,83.1192346452549,46.9706054342497,59.7651201808088,47.0245124377648,66.3578271486123,70.8589060971005,83.0738242504227,80.3221905394739,60.0182192168805,88.4190700865806,82.1873322745557,67.1881851357039,87.4261401009759,77.7547301186365,73.2057945307932,76.1252661771816,73.2256637389218,56.0915156176251,66.8993932231531,52.2246624316302,61.2636904527651,65.1863228212095,70.5539304656949,44.5204027373023,46.3854189125198,43.5727285760694,32.5495712748263,46.6793574119913,40.5124868574171,20.3384392028761,40.5241791061518,15.1948413487729,58.5103589320294,38.259612528488,64.3588992216751,62.2077506388195,64.5909560087732,58.4558055481688,58.1738115726724,66.435773351107,60.8089199802342,67.1077410728684,68.4849939364575,11.0723318193697,5.60967095213783,9.0546282492908,7.3504355692771,45.6318125358591,51.1070152672366,44.3092430011053,62.6877601168804,78.5896122290496,61.2497082765736,66.1794221014012,23.6043681841001,66.3491217916764,85.3665464361643,27.3678976460673,9.35941306751621,60.6191636506148,42.0827370059529,56.4735819274302,40.5669718208617,31.4830148552095,48.8953171242918,14.223679163267,14.5942647556128,36.1938998948474,52.8849639214677,29.1317078085907,95.6085106665125,100.621294791117,91.4449377213393,85.4388306585173,86.8995476156746,14.568541808278,196.079968682586,50.2756558215521,61.5764503156093,73.2129363358164,56.1778828747391,50.6078217508587,16.8074907245642,8.20522130470329,10.2643467613623,50.6939539027385,56.1641518168126,41.7306591640644,22.4262168690721,20.4901232351642,73.2649475351291,73.94342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| |||
|short_description=p1@AIMP1 | |||
}} |
Revision as of 02:38, 22 January 2014
Short description: | p1@AIMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AIMP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000394701, NM_001142416, uc003hyh.2_5end |
EntrezGene: | AIMP1 |
HGNC: | 10648 |
UniProt: | Q12904 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.03e-15 | 168 |
hematopoietic cell | 4.83e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.19e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-13 | 161 |
lymphocyte | 1.85e-12 | 53 |
common lymphoid progenitor | 1.85e-12 | 53 |
lymphoid lineage restricted progenitor cell | 4.31e-12 | 52 |
nongranular leukocyte | 1.94e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.84e-11 | 120 |
leukocyte | 1.26e-10 | 136 |
mesenchymal cell | 2.37e-09 | 354 |
connective tissue cell | 2.11e-08 | 361 |
mature alpha-beta T cell | 3.33e-07 | 18 |
alpha-beta T cell | 3.33e-07 | 18 |
immature T cell | 3.33e-07 | 18 |
mature T cell | 3.33e-07 | 18 |
immature alpha-beta T cell | 3.33e-07 | 18 |
motile cell | 3.60e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.57e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.94e-21 | 235 |
disease of cellular proliferation | 1.05e-20 | 239 |
carcinoma | 3.06e-12 | 106 |
cell type cancer | 7.13e-12 | 143 |
organ system cancer | 2.01e-10 | 137 |
hematologic cancer | 1.55e-08 | 51 |
immune system cancer | 1.55e-08 | 51 |
leukemia | 1.22e-07 | 39 |
myeloid leukemia | 5.67e-07 | 31 |