FFCP PHASE1:Hg19::chr4:151936395..151936412,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1742 | |||
|TSSclassifier=strong | |||
|UniProt=P50851 | |||
|association_with_transcript=6bp_to_ENST00000510413,NM_001199282_5end | |||
|description=CAGE_peak_3_at_LRBA_5end | |||
|id=chr4:151936395..151936412,- | |||
|ontology_enrichment_celltype=CL:0000542!3.43e-20!53;CL:0000051!3.43e-20!53;CL:0000838!5.50e-20!52;CL:0000791!9.26e-11!18;CL:0000789!9.26e-11!18;CL:0002420!9.26e-11!18;CL:0002419!9.26e-11!18;CL:0000790!9.26e-11!18;CL:0000084!7.70e-10!25;CL:0000827!7.70e-10!25;CL:0000945!9.53e-10!24;CL:0000826!9.53e-10!24;CL:0000625!1.44e-07!11;CL:0000066!2.92e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.50e-12;53!CL:0000791;2.78e-11;18!CL:0000789;2.78e-11;18!CL:0002419;2.78e-11;18!CL:0000084;2.50e-10;25!CL:0000945;5.05e-10;24!CL:0000625;5.60e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.29e-21,53;CL:0000051,1.29e-21,53;CL:0000838,2.13e-21,52;CL:0000791,2.49e-11,18;CL:0000789,2.49e-11,18;CL:0002420,2.49e-11,18;CL:0002419,2.49e-11,18;CL:0000790,2.49e-11,18;CL:0000084,1.31e-10,25;CL:0000827,1.31e-10,25;CL:0000945,2.96e-10,24;CL:0000826,2.96e-10,24;CL:0000625,6.09e-08,11;CL:0000066,2.62e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000051;6.50e-12;53!CL:0000790;2.78e-11;18 | |||
|ontology_enrichment_disease=DOID:162!2.79e-10!235;DOID:305!2.21e-09!106;DOID:14566!2.22e-09!239;DOID:0050686!8.92e-08!137;DOID:0050687!7.56e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.55e-09,235;DOID:305,1.11e-08,106;DOID:14566,1.53e-08,239;DOID:0050686,1.63e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@LRBA | |||
}} |
Revision as of 03:27, 22 January 2014
Short description: | p3@LRBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRBA_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000510413, NM_001199282_5end |
EntrezGene: | LRBA |
HGNC: | 1742 |
UniProt: | P50851 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.29e-21 | 53 |
common lymphoid progenitor | 1.29e-21 | 53 |
lymphoid lineage restricted progenitor cell | 2.13e-21 | 52 |
mature alpha-beta T cell | 2.49e-11 | 18 |
alpha-beta T cell | 2.49e-11 | 18 |
immature T cell | 2.49e-11 | 18 |
mature T cell | 2.49e-11 | 18 |
immature alpha-beta T cell | 2.49e-11 | 18 |
T cell | 1.31e-10 | 25 |
pro-T cell | 1.31e-10 | 25 |
lymphocyte of B lineage | 2.96e-10 | 24 |
pro-B cell | 2.96e-10 | 24 |
CD8-positive, alpha-beta T cell | 6.09e-08 | 11 |
epithelial cell | 2.62e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.55e-09 | 235 |
carcinoma | 1.11e-08 | 106 |
disease of cellular proliferation | 1.53e-08 | 239 |
organ system cancer | 1.63e-07 | 137 |