FFCP PHASE1:Hg19::chr5:118691623..118691640,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17260 | |||
|TSSclassifier=strong | |||
|UniProt=O95379 | |||
|association_with_transcript=27bp_to_NM_014350,uc003ksi.2_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_TNFAIP8_5end | |||
|id=chr5:118691623..118691640,+ | |||
|ontology_enrichment_celltype=CL:0002009!5.94e-27!65;CL:0002194!6.95e-26!63;CL:0000576!6.95e-26!63;CL:0000040!6.95e-26!63;CL:0000559!6.95e-26!63;CL:0002087!1.48e-25!119;CL:0002057!1.97e-24!42;CL:0000738!5.76e-23!140;CL:0000048!2.07e-22!430;CL:0000557!2.75e-22!71;CL:0000034!1.59e-21!444;CL:0002031!2.19e-21!124;CL:0000723!3.08e-21!436;CL:0000860!4.71e-21!45;CL:0000839!2.03e-20!70;CL:0002320!2.79e-19!365;CL:0000766!3.51e-19!76;CL:0000134!4.03e-19!358;CL:0000219!2.28e-13!390;CL:0000037!1.20e-11!172;CL:0000566!1.20e-11!172;CL:0002032!1.20e-10!165;CL:0000837!1.20e-10!165;CL:0000988!4.03e-10!182;CL:0000144!1.09e-08!625;CL:0002371!1.52e-08!591;CL:0000763!8.54e-08!112;CL:0000049!8.54e-08!112;CL:0000945!3.29e-07!24;CL:0000826!3.29e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.09e-24;33!CL:0002057;8.09e-24;33!CL:0000473;2.35e-23;39!CL:0000234;2.35e-23;39!CL:0000576;5.91e-19;48!CL:0000766;6.22e-12;69!CL:0002087;2.11e-08;104!CL:0000236;2.20e-08;13!CL:0000945;1.50e-07;24!CL:0000738;1.79e-07;136!CL:0000451;8.10e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.93e-35,61;CL:0000473,2.18e-34,48;CL:0000234,2.18e-34,48;CL:0002194,6.66e-34,59;CL:0000576,6.66e-34,59;CL:0000040,6.66e-34,59;CL:0000559,6.66e-34,59;CL:0000860,2.81e-30,42;CL:0002057,2.81e-30,42;CL:0000557,1.23e-29,67;CL:0000839,1.66e-27,66;CL:0002087,5.72e-27,115;CL:0000766,1.12e-26,72;CL:0000048,8.54e-26,427;CL:0000738,1.37e-25,136;CL:0000723,4.78e-25,433;CL:0000034,6.16e-25,441;CL:0002320,9.11e-24,361;CL:0000134,2.70e-23,354;CL:0002031,6.82e-23,120;CL:0000219,9.61e-17,386;CL:0000037,3.98e-15,168;CL:0002032,8.66e-14,161;CL:0000837,8.66e-14,161;CL:0000763,1.04e-13,108;CL:0000049,1.04e-13,108;CL:0000988,4.53e-13,177;CL:0000236,2.60e-08,14;CL:0000945,9.57e-08,24;CL:0000826,9.57e-08,24 | |||
|ontology_enrichment_development_v019=CL:0002057;5.34e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.33e-23!102;UBERON:0003061!3.33e-23!102;UBERON:0002193!1.99e-21!112;UBERON:0002371!1.05e-20!80;UBERON:0002204!2.51e-20!167;UBERON:0004765!1.67e-18!101;UBERON:0001434!1.67e-18!101;UBERON:0001474!2.12e-18!86;UBERON:0002384!7.70e-18!375;UBERON:0002405!6.62e-11!115;UBERON:0003081!7.45e-09!216;UBERON:0000926!1.18e-07!448;UBERON:0004120!1.18e-07!448;UBERON:0006603!1.18e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.50e-27,98;UBERON:0003061,2.50e-27,98;UBERON:0002371,7.12e-27,76;UBERON:0002193,5.32e-26,108;UBERON:0002405,1.40e-24,93;UBERON:0001474,5.39e-24,82;UBERON:0004765,7.35e-23,90;UBERON:0002384,5.15e-22,371;UBERON:0001434,1.73e-21,100;UBERON:0002204,1.44e-20,167;UBERON:0000926,2.14e-16,315;UBERON:0004120,2.14e-16,315;UBERON:0006603,2.14e-16,315;UBERON:0003081,6.79e-11,203 | |||
|phase1_expression=4.1786027232228,2.99740733447376,1.83240725324762,5.00366491765652,4.91657203870017,3.48935409640147,2.53299878168311,3.15859936713415,1.82829939739887,0,0,0.873765488520689,1.05506791291381,2.35156070624089,2.31978163009541,3.36162573225888,1.80808358407193,2.92124036154949,2.43966399395253,0.369363174230364,0,0,0,0.136874425072884,0,2.59805579543034,3.9408282935974,3.30585281517453,7.47392126012918,1.91914699048606,3.71558695958582,0,0.30120591877825,0,0.0774672005803016,0.284338464974843,0.293600439334847,24.9297933839345,19.853900299544,14.9737500793938,7.3892106499175,6.80176698639857,7.46969146139141,2.03557534291391,2.64513160582167,5.57943340731977,21.1510423584173,20.1472265130695,24.7765096716083,33.6600099016916,37.1433024467196,36.4182634028421,19.9952494827239,20.0100251910986,21.6682378550947,8.094420600332,16.9201813035864,18.2026022400519,22.6502080354468,20.53945773287,20.4587880255693,11.8746468067218,15.5581652944873,13.2129672665135,48.1747336123449,44.8234327506,51.6942466666327,25.3761151909311,36.5038042894141,29.5376828798959,23.6105806027014,43.4567610465326,50.9504443779824,2.95757400836718,4.03948169933583,3.56419697364239,1.23561494261145,3.45406853535464,4.98249318760948,1.71007646244749,1.9891667719909,2.19196984517561,17.5996244461323,16.9302969491261,15.1216573156804,12.3751764544287,15.6154434944045,13.2193061189531,19.170301310761,19.0810750907073,4.55370375287559,5.87237189370939,4.58727873750275,1.32171328579026,15.1337312005015,1.84368859342554,0.983548850569165,0.393010762749165,0.411202997999018,0,0.32592226663359,0.473447805734733,0,1.11410456885174,1.17842362989935,0.443067789167242,0.541607727530031,1.40900451698243,0.260118695119756,0,0.276350017785848,0,0,0,0,0.566546713487831,0.766440987203842,0.68725489096526,0.253019692019503,0.318565414324097,0.651083453856419,0.950452044448374,1.05402583354441,0.511946444617674,1.24930726552346,0.710331756132051,0,0.201606743224732,0.267440195783507,0.434473211648397,0,1.34140171940727,0.255725123687061,2.1686349143074,4.51204119572301,1.44846518960824,3.1811437882044,6.32625331393427,0.189069634328136,0.886917589850256,0.702678285545008,0.916853528483988,0.364295288292542,0,8.43823223502177,6.96518949197069,7.04677190749985,10.2550968451297,8.57992366170192,15.9726725571713,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0.436094052142534,3.47880366186723,0.506522046658319,0.926864265692532,2.29469296599051,1.77334191099179,0.560677600142307,1.06748995729705,0.49333509683432,1.8672662123986,0.942974704487816,0.326923806226917,0.454072282934794,0,0,2.80944069147288,1.1409436430889,3.73621701379503,0.939475989150119,0.161872944368132,0.98315564691574,1.42907919878425,0.122834317311768,0.516628905878827,2.37600571456411,1.48360157567134,0,0,0.505008341862199,0.250237039743928,0.554128230968366,0.877955241761676,1.83892677479412,2.40380894250555,0.113432183160021,0,2.34913127700424,4.66250182551036,0.600182192168805,3.91599611106068,2.31876486041066,3.90845398296339,1.0126579934476,2.04617710838517,2.77677151668526,4.51044503347267,4.52608959092673,0.710019185033229,0.403008392910561,1.18692414617341,0.773043412653187,0.545492241181669,0.286804595389004,0.243947412259191,0.662648841607426,0.232387885739037,0.414644220061482,0,0.36497735907583,1.56449532329816,3.21620469096443,0,2.78620756819187,6.49691533502627,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,3.33318402570707,0,0,0,0.34779121492523,1.17408694235822,1.73239737313289,1.38895653772983,1.71228737011138,0,0,7.63272718870932,13.806251643215,7.58018927672514,0.93733833986777,0,0.567100388969546,3.49278238541108,1.16253575405585,0,0,0,0.414656231081544,0.432359860250884,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.8800594298514,3.49033632546,0,0.845302752556,1.32969058292435,0,0,0,0.799266537048298,0,0,0,1.62868092146868,0,0.791951872933429,2.1100756394171,0.871533458600294,0.399891964728228,4.86495122564762,3.51579964002488,6.32501818449095,0.239624855491583,0,4.27910715122155,0.868687840005475,1.64381058040307,2.86497541183833,1.00876629594175,0.788123040807709,0.431255149719035,1.02674429023799,0,0,0,0.335032530668698,0,0,0,0,2.94459580125936,0,1.35632511849868,2.70362119990049,2.3195768543631,1.89242898040722,3.04567678981054,3.61135319673263,0,1.03473071292505,1.32845119707087,1.65932251687533,1.82455590382974,0.195801157462741,0,2.27444828735176,2.80428461064202,4.58928498554811,0,0,0.604780586659361,3.47350930946288,0.61384789315225,1.40330047216537,1.28139149255701,8.69902323413396,1.28683136914886,2.96836132889982,2.00472601943452,3.9063579568888,4.10635780069046,1.03850885836724,2.67283870457906,0,0,0.368323955743585,0.68888668898764,0.728364672026868,3.93373244878272,0,0.231046011313244,0.784349769176855,0,0.105551628892876,0,0,0,0,0.54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| |||
|short_description=p6@TNFAIP8 | |||
}} |
Revision as of 07:01, 22 January 2014
Short description: | p6@TNFAIP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TNFAIP8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 27bp_to_NM_014350, uc003ksi.2_5end |
EntrezGene: | TNFAIP8 |
HGNC: | 17260 |
UniProt: | O95379 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.93e-35 | 61 |
defensive cell | 2.18e-34 | 48 |
phagocyte | 2.18e-34 | 48 |
monopoietic cell | 6.66e-34 | 59 |
monocyte | 6.66e-34 | 59 |
monoblast | 6.66e-34 | 59 |
promonocyte | 6.66e-34 | 59 |
classical monocyte | 2.81e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.81e-30 | 42 |
granulocyte monocyte progenitor cell | 1.23e-29 | 67 |
myeloid lineage restricted progenitor cell | 1.66e-27 | 66 |
nongranular leukocyte | 5.72e-27 | 115 |
myeloid leukocyte | 1.12e-26 | 72 |
multi fate stem cell | 8.54e-26 | 427 |
leukocyte | 1.37e-25 | 136 |
somatic stem cell | 4.78e-25 | 433 |
stem cell | 6.16e-25 | 441 |
connective tissue cell | 9.11e-24 | 361 |
mesenchymal cell | 2.70e-23 | 354 |
hematopoietic lineage restricted progenitor cell | 6.82e-23 | 120 |
motile cell | 9.61e-17 | 386 |
hematopoietic stem cell | 3.98e-15 | 168 |
hematopoietic oligopotent progenitor cell | 8.66e-14 | 161 |
hematopoietic multipotent progenitor cell | 8.66e-14 | 161 |
myeloid cell | 1.04e-13 | 108 |
common myeloid progenitor | 1.04e-13 | 108 |
hematopoietic cell | 4.53e-13 | 177 |
B cell | 2.60e-08 | 14 |
lymphocyte of B lineage | 9.57e-08 | 24 |
pro-B cell | 9.57e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.50e-27 | 98 |
blood island | 2.50e-27 | 98 |
bone marrow | 7.12e-27 | 76 |
hemolymphoid system | 5.32e-26 | 108 |
immune system | 1.40e-24 | 93 |
bone element | 5.39e-24 | 82 |
skeletal element | 7.35e-23 | 90 |
connective tissue | 5.15e-22 | 371 |
skeletal system | 1.73e-21 | 100 |
musculoskeletal system | 1.44e-20 | 167 |
mesoderm | 2.14e-16 | 315 |
mesoderm-derived structure | 2.14e-16 | 315 |
presumptive mesoderm | 2.14e-16 | 315 |
lateral plate mesoderm | 6.79e-11 | 203 |