FFCP PHASE1:Hg19::chr5:176449586..176449607,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51720 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30298 | |||
|TSSclassifier=strong | |||
|UniProt=D6RC40 | |||
|association_with_transcript=0bp_to_ENST00000509236_5end | |||
|description=CAGE_peak_3_at_UIMC1_5end | |||
|id=chr5:176449586..176449607,- | |||
|ontology_enrichment_celltype=CL:0000542!3.72e-16!53;CL:0000051!3.72e-16!53;CL:0000838!4.25e-16!52;CL:0000084!7.53e-11!25;CL:0000827!7.53e-11!25;CL:0000791!4.42e-09!18;CL:0000789!4.42e-09!18;CL:0002420!4.42e-09!18;CL:0002419!4.42e-09!18;CL:0000790!4.42e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.19e-14;25!CL:0000542;2.95e-11;53!CL:0000791;1.44e-10;18!CL:0000789;1.44e-10;18!CL:0002419;1.44e-10;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.13e-20,52;CL:0000542,3.32e-19,53;CL:0000051,3.32e-19,53;CL:0000084,4.94e-15,25;CL:0000827,4.94e-15,25;CL:0000791,1.64e-11,18;CL:0000789,1.64e-11,18;CL:0002420,1.64e-11,18;CL:0002419,1.64e-11,18;CL:0000790,1.64e-11,18;CL:0000037,3.18e-08,168;CL:0002032,3.29e-08,161;CL:0000837,3.29e-08,161;CL:0000988,5.38e-08,177;CL:0000624,2.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;2.95e-11;53!CL:0000790;1.44e-10;18 | |||
|ontology_enrichment_disease=DOID:14566!1.49e-22!239;DOID:162!1.79e-21!235;DOID:2531!4.39e-15!51;DOID:0060083!4.39e-15!51;DOID:0050686!3.04e-12!137;DOID:1240!6.19e-11!39;DOID:0050687!6.47e-09!143;DOID:8692!3.90e-08!31;DOID:305!2.98e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:2531;9.58e-12;51!DOID:0060083;9.58e-12;51!DOID:1240;2.38e-10;39!DOID:0060058;7.08e-09;10!DOID:8692;2.86e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.04e-18,51;DOID:0060083,2.04e-18,51;DOID:14566,3.57e-14,239;DOID:162,3.20e-13,235;DOID:1240,1.94e-12,39;DOID:0050686,3.38e-09,137;DOID:0060058,4.77e-09,10;DOID:8692,1.51e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.17e-07!94;UBERON:0001016!1.17e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0,0.672325146451775,1.20538905604795,0,0,0.61560529038394,0.204000691244253,0.940364164434263,0.572471974262113,1.09499540058307,0.753255837568817,1.91033514369878,1.47781061009902,1.10195093839151,0.393364276848904,0.383829398097213,0,0.919421224478927,0.30120591877825,0,4.02829443017569,2.55904618477359,0.587200878669695,0,0,0.217010870715852,0.223915474239924,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0.619412741790207,0.28769239232215,0,0.945928919554341,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0,0,0.736555271975129,0,0.211255286311942,0.425208599930087,0.209658645508376,0.22465726229299,0.300353785683013,0.48217676009124,0.285012743741249,0.39783335439818,0.365328307529268,1.75996244461323,0,0,1.28019066769952,0.800791974072025,0.574752439954483,1.98313461835459,0.954053754535364,1.1384259382189,0,1.52909291250092,0,1.68152568894461,1.31692042387539,1.96709770113833,1.96505381374582,1.43921049299656,1.67186495390678,3.58514493296949,1.89379122293893,1.94826728407911,2.1167986808183,1.47302953737419,0.664601683750863,0.812411591295047,1.0247305578054,1.30059347559878,1.47994114143309,0.829050053357545,0.869409257205157,1.4828656316206,1.07016331235885,0,1.47302145506836,2.68254345521345,1.37450978193052,1.01207876807801,1.27426165729639,2.60433381542567,1.90090408889675,1.50575119077773,0.895906278080929,1.24930726552346,0.947109008176067,0.821127996921047,2.62088766192152,1.33720097891754,1.88271725047639,2.43806866313962,0,0.12786256184353,0.361439152384566,0,0,0,0.486634870302636,0.472674085820339,0.443458794925128,0.263504357079378,1.37528029272598,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0.74291500265913,0.198762407366705,0.860234595106124,0.694281003215189,0.56530794192401,0.419499436209906,0.550236083880135,0.626984899610432,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0.488124115096339,1.10298924103761,0,0.982297011124877,1.12264686313085,0.788280363383256,3.06633274931766,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0.506522046658319,0.397227542439656,0.573673241497627,0,0,0,0,0.622422070799533,0,0.326923806226917,0.302714855289863,0,0.70296429550139,0.624320153660641,0,0,0.822041490506354,1.13311061057692,0.561803226808994,0.408308342509787,0.61417158655884,0,0,0,0,0.718618141816238,0.336672227908132,0.500474079487857,0,0,0,0.300476117813194,0.226864366320042,1.25572744982203,0.213557388818567,1.05965950579781,0.900273288253207,0.412210116953756,0,0.37223371266318,0.506328996723799,0.389748020644795,0.757301322732344,0.276149695926898,0.161646056818812,0.355009592516614,0.302256294682921,0.169560592310488,0.193260853163297,0.545492241181669,0.286804595389004,0.243947412259191,0,0.232387885739037,0.310983165046111,0,1.45990943630332,0,0,0,0,0,0.709840800239063,0.674338760312407,0.482022059766964,0.55146986366197,0.871517776369625,0.71181185733329,1.48314438976181,1.37355025587742,0.38474715694639,0,0,0,0,2.53510069643662,0.982827216677626,0,5.73902029239046,0.245976877086227,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0.117408694235822,0.721832238805369,0.462985512576611,0.761016608938393,0,0.858486162094873,0,0.234004265139238,0.297262324577456,0,0.16798212819886,0.283550194484773,0.53735113621709,0,0,0.985326475791887,0.088048434013226,0,0,0,0.317489471460845,0,1.17217447210047,0,0.616964956219941,0,0,0.112131084345361,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0,0,1.02882949704857,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,2.01753259188349,0.985153801009636,1.94064817373566,1.41177339907723,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0.207970861530807,0.356857977594324,0.157702415033935,0.35142424497814,0,0,0,0,0,0.347534457872331,0.195801157462741,0,1.03384013061444,0.647142602455851,0.640365346820666,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0,0,0.462629081407967,0,0.164254312027618,0,0.116210378459959,0.604297247958111,0,0.0920809889358963,0.918515585316854,0.182091168006717,0.917870904715969,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.647747748306418,0,0.270946437543853,0.501689773854853,0,0,0,4.16593765627276,3.39866086332371,0.769350375349168,0.656029291399411,0.976135183992909,0.412164046590889,2.93022287418699,3.4653989966647,0,0,1.6068392984416,0.773365746336976,0.462145851343933,0,0.275673144969061,0.859361958946189,0.580066775656914,0.511359764496605,0.267096106940212,0.495854746082934,0,1.65896526242959,0.10115778085555,0,0,0.6970372701606,0.308033580176089,0,0,0,0.286249773483982,0.744316738719335,0.316379424718726,0,0.255897791311334,0,0.318203247925937,0,0.179872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| |||
|short_description=p3@UIMC1 | |||
}} |
Revision as of 09:17, 22 January 2014
Short description: | p3@UIMC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UIMC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000509236_5end |
EntrezGene: | UIMC1 |
HGNC: | 30298 |
UniProt: | D6RC40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.13e-20 | 52 |
lymphocyte | 3.32e-19 | 53 |
common lymphoid progenitor | 3.32e-19 | 53 |
T cell | 4.94e-15 | 25 |
pro-T cell | 4.94e-15 | 25 |
mature alpha-beta T cell | 1.64e-11 | 18 |
alpha-beta T cell | 1.64e-11 | 18 |
immature T cell | 1.64e-11 | 18 |
mature T cell | 1.64e-11 | 18 |
immature alpha-beta T cell | 1.64e-11 | 18 |
hematopoietic stem cell | 3.18e-08 | 168 |
hematopoietic oligopotent progenitor cell | 3.29e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.29e-08 | 161 |
hematopoietic cell | 5.38e-08 | 177 |
CD4-positive, alpha-beta T cell | 2.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.04e-18 | 51 |
immune system cancer | 2.04e-18 | 51 |
disease of cellular proliferation | 3.57e-14 | 239 |
cancer | 3.20e-13 | 235 |
leukemia | 1.94e-12 | 39 |
organ system cancer | 3.38e-09 | 137 |
lymphoma | 4.77e-09 | 10 |
myeloid leukemia | 1.51e-08 | 31 |