FFCP PHASE1:Hg19::chr7:120628737..120628818,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79974 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26159 | |||
|TSSclassifier=strong | |||
|UniProt=A4D0V7 | |||
|association_with_transcript=0bp_to_NM_024913,uc003vjq.3_5end | |||
|coexpression_cluster_id=C4648 | |||
|description=CAGE_peak_1_at_C7orf58_5end | |||
|id=chr7:120628737..120628818,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.45e-08!75;CL:0000055!1.48e-08!180;CL:0002620!5.31e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.25e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.58e-09,76;CL:0002620,2.28e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.36e-20!115;UBERON:0002204!1.42e-11!167;UBERON:0000468!1.80e-11!659;UBERON:0000480!2.13e-10!626;UBERON:0000467!2.13e-10!625;UBERON:0000479!6.20e-10!787;UBERON:0000914!7.29e-10!83;UBERON:0002329!7.29e-10!83;UBERON:0003077!7.29e-10!83;UBERON:0003059!7.29e-10!83;UBERON:0007282!7.29e-10!83;UBERON:0009618!7.29e-10!83;UBERON:0007285!7.29e-10!83;UBERON:0004290!5.20e-09!70;UBERON:0000062!3.89e-08!511;UBERON:0002385!1.40e-07!63;UBERON:0001015!1.40e-07!63;UBERON:0000383!1.40e-07!63;UBERON:0000486!5.00e-07!82;UBERON:0001134!8.07e-07!61;UBERON:0002036!8.07e-07!61;UBERON:0003082!8.07e-07!61;UBERON:0000926!8.96e-07!448;UBERON:0004120!8.96e-07!448;UBERON:0006603!8.96e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.28e-08;31!UBERON:0001015;2.28e-08;31!UBERON:0000383;2.28e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.17e-20,114;UBERON:0000479,6.95e-14,773;UBERON:0002204,1.37e-12,167;UBERON:0000926,5.57e-11,315;UBERON:0004120,5.57e-11,315;UBERON:0006603,5.57e-11,315;UBERON:0007524,1.40e-09,73;UBERON:0003077,2.24e-09,72;UBERON:0007285,2.24e-09,72;UBERON:0002329,2.45e-09,71;UBERON:0003059,2.45e-09,71;UBERON:0007282,2.45e-09,71;UBERON:0004290,2.45e-09,71;UBERON:0009618,2.45e-09,71;UBERON:0002385,7.77e-08,64;UBERON:0001015,7.77e-08,64;UBERON:0000383,7.77e-08,64;UBERON:0000923,9.53e-08,560;UBERON:0010316,9.53e-08,560;UBERON:0005291,9.53e-08,560;UBERON:0006598,9.53e-08,560;UBERON:0010317,9.53e-08,560;UBERON:0002532,9.53e-08,560;UBERON:0002050,1.49e-07,564;UBERON:0007503,2.40e-07,78;UBERON:0001134,4.85e-07,62;UBERON:0002036,4.85e-07,62;UBERON:0003082,4.85e-07,62;UBERON:0000486,7.68e-07,83 | |||
|phase1_expression=3.45188920614058,4.92431204949261,4.22863212287913,1.0007329835313,3.5756887554183,4.36169262050184,0,2.52687949370732,2.87304191019822,1.22866968250754,0,0.436882744260345,0,4.95065411840187,5.63375538737457,4.03395087871065,3.61616716814386,2.92124036154949,2.43966399395253,0.861847406537515,1.02000345622126,0,1.43117993565528,0,1.25542639594803,0,0,0,4.32700704533794,3.45446458287491,8.51488678238418,0,0,0,0,0,15.2672228454121,6.64794490238253,3.60980005446255,4.99125002646459,6.49354875295781,3.2389366601898,2.83333124397605,2.03557534291391,1.88937971844405,0.242584061187816,1.62700325833979,1.6446715520873,1.85823822537062,2.58923153089935,2.0492856522328,5.43909128743746,3.44745680736619,3.22742341791913,5.41705946377367,3.01187743268168,0.818718450173537,1.12361742222542,3.06083892370903,3.53021929783703,3.83602275479425,2.30895910130701,3.19141852194611,2.98357325372886,1.7412554317715,0,1.86846674698672,3.51748131359441,5.21482918420201,3.04064382587163,1.21079900526674,3.31449872388808,4.74693581161327,15.8441464733956,11.2680278981473,15.9340570586366,17.7479237211462,17.8710502481393,25.0731915247445,10.5454715184262,12.9295840179409,18.2664153764634,0,0,0,0.853460445133014,0.400395987036012,1.14950487990897,0,0,0,0,0.382273228125229,7.93027971474155,6.72610275577843,9.48182705190277,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.25618263945135,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,1.20460095262218,0.895906278080929,0,1.89421801635213,0,0,0,0.144824403882799,2.43806866313962,6.03630773733273,2.04580098949649,7.59022220007589,3.00802746381534,1.73815822752988,0,0.973269740605272,2.3633704291017,0,1.14185221401064,7.20384915237419,0,0,0.649094787309367,0.348259474598534,0.531831842075461,34.3426498999692,25.1677760743256,40.8603251462521,0.39752481473341,1.72046919021225,0.347140501607594,0,0,0,0,0.258416759169329,1.42306505074684,0.66944122552934,2.01414658554573,0,0.732186172644509,0.367663080345869,0,1.16089646769304,0.44905874525234,0.675668882899933,0,0,0.183201743930407,0,0,0,5.96366342034382,5.57174251324151,6.75286822147416,8.3182620017156,5.67469411517371,2.24271040056923,0,1.2333377420858,5.29058760179603,2.82892411346345,3.92308567472301,5.90293967815232,7.49028701823999,9.37285727335187,2.80944069147288,2.85235910772225,3.73621701379503,20.9033407585901,18.2916427135989,15.7304903506518,13.0658669603132,9.2125737983826,4.75298593408521,11.8800285728205,3.70900393917835,3.64064544775211,1.43723628363248,13.2985530023712,17.6417113019469,22.9963215851872,8.34057479673592,10.4205850571667,2.55404700141215,6.4656344401212,12.7366641339092,8.11518077510556,6.56988893594642,9.00273288253207,13.9120914471893,6.1833729610951,10.0503102419058,20.0843835367107,8.76933046450788,5.3011092591264,10.3095886479375,14.3864990568743,6.03516307278244,6.54888638479662,6.10418132317755,0,0.272746120590835,0.860413786167011,0.121973706129595,0.132529768321485,2.09149097165133,1.0366105501537,0.252320850875628,0.72995471815166,7.8224766164908,14.1513006402435,11.0507937081984,14.8597736970233,12.271951188383,5.44211280183282,5.56329477257736,6.98931986662098,7.49999014580279,6.75426276686459,4.98268300133303,4.44943316928543,4.90553662813365,1.92373578473195,0,0,2.057870056657,0,1.26755034821831,0,9.45263850690247,0,0.122988438543114,1.88724591328378,0,0,0.100528972411631,0.370353780634118,0.977424915930974,1.03993478527958,2.88662684050547,0.115930404975077,0.821860859650752,1.87676382089396,0.462985512576611,0.951270761172991,0,0,14.0343693469816,7.48813648445561,3.86441021950693,0,0,0,0.358234090811393,0,1.15014803749563,0,0,0.207328115540772,0,0.25248486685276,1.14296209725904,0,1.17217447210047,1.71072446022705,1.7480673759565,0,0.571652865261156,5.60655421726804,2.61576041299968,8.58057944105115,2.58543431515556,0,2.535908257668,13.5628439458284,7.28052058379563,4.37252536245642,1.41849132023278,5.06202140130589,8.14974563851441,1.08524321078289,0.823240336780769,5.5375151329935,3.55391948742546,1.58390374586686,0.602878754119172,0.871533458600294,0.099972991182057,6.08118903205952,5.02257091432126,4.21667878966063,1.91699884393266,0,7.13184525203592,12.5959736800794,4.52047909610843,16.6526695813103,0.112085143993527,0.197030760201927,0,0.256686072559497,0,0,0.773288812777695,0,0,0,2.99161459204025,0.414415513436035,5.5211171273613,8.00272833695483,4.6115054028955,2.07970861530807,3.56857977594324,4.41566762095017,6.09135357962109,3.61135319673263,0,1.03473071292505,0,1.65932251687533,9.81784843489336,1.76221041716467,2.05886054286514,7.44364894042395,4.74571241800957,2.66818894508611,0,0,0,0.496215615637554,3.83654933220156,1.96462066103151,3.97231362692673,5.11707249066703,1.28683136914886,0,5.39733928309294,1.42049380250502,8.21271560138091,3.11552657510173,4.88083589531829,0.241718899183244,0,0,4.13332013392584,5.28064387219479,2.88473712910733,0.902399225814824,1.38627606787947,0,0,1.37217117560738,1.13733384070897,0.170093705276516,1.29549549661284,0,1.08378575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| |||
|short_description=p1@C7orf58 | |||
}} |
Revision as of 19:01, 22 January 2014
Short description: | p1@C7orf58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C7orf58_5end |
Coexpression cluster: | C4648_chronic_smooth_mature_aorta_bladder_heart_mesenchymal |
Association with transcript: | 0bp_to_NM_024913, uc003vjq.3_5end |
EntrezGene: | C7orf58 |
HGNC: | 26159 |
UniProt: | A4D0V7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.58e-09 | 76 |
skin fibroblast | 2.28e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.17e-20 | 114 |
tissue | 6.95e-14 | 773 |
musculoskeletal system | 1.37e-12 | 167 |
mesoderm | 5.57e-11 | 315 |
mesoderm-derived structure | 5.57e-11 | 315 |
presumptive mesoderm | 5.57e-11 | 315 |
dense mesenchyme tissue | 1.40e-09 | 73 |
paraxial mesoderm | 2.24e-09 | 72 |
presumptive paraxial mesoderm | 2.24e-09 | 72 |
somite | 2.45e-09 | 71 |
presomitic mesoderm | 2.45e-09 | 71 |
presumptive segmental plate | 2.45e-09 | 71 |
dermomyotome | 2.45e-09 | 71 |
trunk paraxial mesoderm | 2.45e-09 | 71 |
muscle tissue | 7.77e-08 | 64 |
musculature | 7.77e-08 | 64 |
musculature of body | 7.77e-08 | 64 |
germ layer | 9.53e-08 | 560 |
germ layer / neural crest | 9.53e-08 | 560 |
embryonic tissue | 9.53e-08 | 560 |
presumptive structure | 9.53e-08 | 560 |
germ layer / neural crest derived structure | 9.53e-08 | 560 |
epiblast (generic) | 9.53e-08 | 560 |
embryonic structure | 1.49e-07 | 564 |
epithelial vesicle | 2.40e-07 | 78 |
skeletal muscle tissue | 4.85e-07 | 62 |
striated muscle tissue | 4.85e-07 | 62 |
myotome | 4.85e-07 | 62 |
multilaminar epithelium | 7.68e-07 | 83 |