FFCP PHASE1:Hg19::chr7:139529040..139529073,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6916 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11609 | |||
|TSSclassifier=strong | |||
|UniProt=E7ENP0,F8WD37,E7EP75,C9J8N6 | |||
|association_with_transcript=0bp_to_ENST00000411653,ENST00000422328,ENST00000455353,ENST00000458722,ENST00000462275,ENST00000476637,ENST00000492560_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_TBXAS1_5end | |||
|id=chr7:139529040..139529073,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.12e-46!172;CL:0000566!1.12e-46!172;CL:0000988!2.72e-46!182;CL:0002032!4.51e-44!165;CL:0000837!4.51e-44!165;CL:0000738!3.12e-40!140;CL:0000763!1.20e-39!112;CL:0000049!1.20e-39!112;CL:0000766!2.15e-39!76;CL:0002031!3.85e-35!124;CL:0002087!4.79e-34!119;CL:0000839!6.59e-34!70;CL:0000557!1.02e-32!71;CL:0002194!1.97e-30!63;CL:0000576!1.97e-30!63;CL:0000040!1.97e-30!63;CL:0000559!1.97e-30!63;CL:0002057!7.56e-30!42;CL:0002009!3.41e-29!65;CL:0000860!5.37e-26!45;CL:0002393!1.11e-07!9;CL:0002397!1.11e-07!9;CL:0000094!4.07e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.36e-24;33!CL:0002057;3.36e-24;33!CL:0000473;1.30e-23;39!CL:0000234;1.30e-23;39!CL:0000576;1.23e-22;48!CL:0000766;7.90e-21;69!CL:0000763;5.83e-16;100!CL:0000738;2.16e-10;136!CL:0002087;8.02e-10;104!CL:0000988;4.87e-08;177!CL:0000094;6.89e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.52e-49,72;CL:0000037,2.41e-48,168;CL:0000763,2.07e-47,108;CL:0000049,2.07e-47,108;CL:0000988,4.86e-47,177;CL:0002032,2.57e-45,161;CL:0000837,2.57e-45,161;CL:0000839,4.57e-43,66;CL:0000738,1.83e-41,136;CL:0000557,6.17e-41,67;CL:0002194,4.10e-39,59;CL:0000576,4.10e-39,59;CL:0000040,4.10e-39,59;CL:0000559,4.10e-39,59;CL:0000473,8.15e-38,48;CL:0000234,8.15e-38,48;CL:0002009,7.43e-37,61;CL:0002031,2.34e-36,120;CL:0002087,5.01e-35,115;CL:0000860,9.21e-34,42;CL:0002057,9.21e-34,42;CL:0002393,1.58e-08,9;CL:0002397,1.58e-08,9;CL:0000094,6.93e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.53e-24;42!CL:0000049;1.95e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.62e-37!102;UBERON:0003061!6.62e-37!102;UBERON:0002193!6.50e-34!112;UBERON:0007023!1.62e-32!115;UBERON:0002371!7.32e-28!80;UBERON:0002405!1.71e-25!115;UBERON:0001474!3.22e-24!86;UBERON:0004765!1.07e-18!101;UBERON:0001434!1.07e-18!101;UBERON:0003081!3.27e-17!216;UBERON:0001049!2.98e-11!57;UBERON:0005068!2.98e-11!57;UBERON:0006241!2.98e-11!57;UBERON:0007135!2.98e-11!57;UBERON:0003080!2.38e-09!42;UBERON:0002780!4.42e-09!41;UBERON:0001890!4.42e-09!41;UBERON:0006240!4.42e-09!41;UBERON:0002616!6.84e-09!59;UBERON:0000178!1.56e-08!15;UBERON:0000179!1.56e-08!15;UBERON:0000463!1.56e-08!15;UBERON:0002020!1.57e-07!34;UBERON:0003528!1.57e-07!34;UBERON:0001893!1.66e-07!34;UBERON:0002791!2.82e-07!33;UBERON:0000955!7.48e-07!69;UBERON:0006238!7.48e-07!69;UBERON:0001869!9.80e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.35e-09;114!UBERON:0000178;8.31e-09;15!UBERON:0000179;8.31e-09;15!UBERON:0000463;8.31e-09;15!UBERON:0002780;3.80e-07;41!UBERON:0001890;3.80e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.79e-43,98;UBERON:0003061,4.79e-43,98;UBERON:0002193,8.92e-38,108;UBERON:0007023,5.81e-36,114;UBERON:0002371,9.47e-34,76;UBERON:0001474,6.26e-30,82;UBERON:0002405,8.22e-30,93;UBERON:0004765,1.66e-26,90;UBERON:0001434,1.43e-21,100;UBERON:0003081,1.38e-17,203;UBERON:0001049,1.34e-11,56;UBERON:0005068,1.34e-11,56;UBERON:0006241,1.34e-11,56;UBERON:0007135,1.34e-11,56;UBERON:0000073,1.59e-10,53;UBERON:0002616,1.59e-10,53;UBERON:0002780,1.69e-09,41;UBERON:0001890,1.69e-09,41;UBERON:0003080,1.69e-09,41;UBERON:0006240,1.69e-09,41;UBERON:0000178,8.15e-09,15;UBERON:0000179,8.15e-09,15;UBERON:0000463,8.15e-09,15;UBERON:0003528,9.34e-08,34;UBERON:0002020,9.34e-08,34;UBERON:0001893,9.93e-08,34;UBERON:0000479,2.83e-07,773;UBERON:0000955,4.27e-07,68;UBERON:0006238,4.27e-07,68;UBERON:0002791,4.78e-07,32;UBERON:0001869,7.08e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.60896258848061,2.31978163009541,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0.251085279189606,0,0.328402357799783,0.0787107813136792,180.160838796798,57.5744097145819,72.7635779585557,0,0,0,0.0774672005803016,0.142169232487422,31.4152470088287,95.8412056760148,63.3720454005648,67.0563590511982,171.071422319302,140.569851052237,155.575642851049,271.167715323888,174.956561927919,183.636134319177,193.845816779341,120.883359078417,122.643722874461,201.96005941015,128.08035326455,165.301078692121,164.788435392104,134.260814185436,150.323400119719,206.501846478237,168.928906885807,179.554064071623,183.344251530171,144.097133157166,128.506762285607,196.92122621147,149.198815900981,176.030821970003,167.450730688693,148.087543644387,203.040053172557,161.301643094829,105.861032439301,141.389937903031,145.295880632009,164.988380922429,199.371304087757,246.112408553412,249.172239559031,234.608024323873,203.988794162035,180.963155874015,135.652395172336,264.77683893562,245.662096340876,228.330192205792,3.51992488922645,10.3766336139805,7.11607403090844,15.3622880123943,5.20514783146816,12.6445536789986,9.91567309177293,6.67837628174755,6.83055562931338,3.52342313622563,3.44045905312706,30.3994055731759,22.4203425192614,26.3384084775077,0.786839080455332,2.75107533924415,5.34563897398724,0.167186495390678,0.32592226663359,0.946895611469467,0,7.13026924065111,5.00830042707223,7.3106185212595,3.5204502289452,2.43373507478783,4.29195846947598,3.4531959966772,1.10540007114339,2.02862160014537,0.14828656316206,0.535081656179426,0,7.0251792472491,15.3288197440768,6.8725489096526,10.6268270648191,9.5569624297229,3.90650072313851,3.8018081777935,15.8103875031661,10.8788619481256,17.4903017173284,17.9950711553453,5.74789597844733,1.00803371612366,1.06976078313403,0.289648807765598,0,0.670700859703636,1.02290049474824,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,6.15601654839249,0,0,36.3493080893245,35.5224664090505,24.9960965775466,6.67773748054957,9.15191857248205,9.65789503456869,2.38514888840046,2.58070378531837,0,2.82653970962005,3.77549492588915,1.10047216776027,4.17989933073621,0.775250277507987,0.71153252537342,0,0,0,0,0.367663080345869,0,1.16089646769304,0.898117490504679,1.80178368773316,0,0.949265659568129,1.28241220751285,260.925226523405,232.668158488995,0,0,0,0,0,1.41867352879343,0,0,0,0.622422070799533,2.82892411346345,2.12500474047496,2.27036141467397,0.576175924479999,0.468642863667593,0,0,0,0,0,0,0.61246251376468,0.245668634623536,0.309977343527296,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404493924480493,0,0,5.16708818237254,8.41450642820675,0,0,2.53510069643662,8.84544495009863,7.08947888017685,0,0.122988438543114,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0,0,0.144366447761074,0,0.380508304469197,0,0,107.350614654105,36.5046653617211,60.9387765383786,0.93733833986777,0,0,0,0,0,175.388112690956,140.965542855175,40.8436387615321,38.6241475157457,52.0118825716685,0,0,0,0,0,0.600686115687835,1.42913216315289,0.336393253036082,0,0.4400297149257,0,0,0.845302752556,0,0,0,0,0.532844358032199,0.285955987316295,0,0,0,0,0.791951872933429,0,0,0,116.758829415543,94.4243331892398,82.2252363983823,0,0,0,0.144781306667579,1.2328579353023,0,0.336255431980582,11.4277840917118,3.45004119775228,13.6043618456533,0.254094624222463,0,0,1.17261385734044,0.637938751653163,330.312097560707,260.270469507502,331.946826262264,0.613457458595699,1.00034104211935,0,0,0,0,0,0,0,0,0,0,0,1.17480694477644,0.343143423810856,55.2070629748109,64.7142602455851,39.382468829471,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.200506470303285,0,0.803701137152247,0.364182336013434,1.18011973463482,3.15839729035188,3.54270550680308,1.56869953835371,4.38417673959782,4.01096189792928,6.8240030442538,3.06168669497728,1.29549549661284,3.08454505380579,4.33514300070165,4.01351819083883,0.254876273045038,0.831076008928724,1.34324852833307,3.50815802633495,6.79732172664741,0,0,0,22.0507764926126,0,0,0,0,0,0,0.308097234229289,0,0,0,0,0.170453254832202,0,0,0,0.765676274967505,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0,0,0,0,0,0,0,0.78494864019923,0.359744915166629,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.409499734223957,0.565621727814851,0,0,1.32687795048244,0,0.578775534266688,0,0,1.54911749049875,0,0,0,0.35667105148125,0,0.422215270595328,0,3.41525856389144,2.0996083214699,0,0.670302275535787,0,19.0170477569094,0,0,0,0,172.532187138938,190.394664578451,119.0562621194,126.02460921717,118.88369692191,168.603060910107,158.769242548006,122.934402325612,0,0,0,0.557409525377156,0.144269212976445,0.142283686696828,0.797131363644112,1.59663497146253,33.1304290328994,38.1012448902989,3.57084134302011,24.7101516739844,2.51058146936511,3.44695770700651,15.038068625404,21.8386393364068,16.7011598107848,8.475587702024,9.36861722918718,42.9381680944706,1.84344458585075,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| |||
|short_description=p1@TBXAS1 | |||
}} |
Revision as of 19:38, 22 January 2014
Short description: | p1@TBXAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TBXAS1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000411653, ENST00000422328, ENST00000455353, ENST00000458722, ENST00000462275, ENST00000476637, ENST00000492560_5end |
EntrezGene: | TBXAS1 |
HGNC: | 11609 |
UniProt: | E7ENP0F8WD37E7EP75C9J8N6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.52e-49 | 72 |
hematopoietic stem cell | 2.41e-48 | 168 |
myeloid cell | 2.07e-47 | 108 |
common myeloid progenitor | 2.07e-47 | 108 |
hematopoietic cell | 4.86e-47 | 177 |
hematopoietic oligopotent progenitor cell | 2.57e-45 | 161 |
hematopoietic multipotent progenitor cell | 2.57e-45 | 161 |
myeloid lineage restricted progenitor cell | 4.57e-43 | 66 |
leukocyte | 1.83e-41 | 136 |
granulocyte monocyte progenitor cell | 6.17e-41 | 67 |
monopoietic cell | 4.10e-39 | 59 |
monocyte | 4.10e-39 | 59 |
monoblast | 4.10e-39 | 59 |
promonocyte | 4.10e-39 | 59 |
defensive cell | 8.15e-38 | 48 |
phagocyte | 8.15e-38 | 48 |
macrophage dendritic cell progenitor | 7.43e-37 | 61 |
hematopoietic lineage restricted progenitor cell | 2.34e-36 | 120 |
nongranular leukocyte | 5.01e-35 | 115 |
classical monocyte | 9.21e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.21e-34 | 42 |
intermediate monocyte | 1.58e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.58e-08 | 9 |
granulocyte | 6.93e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.79e-43 | 98 |
blood island | 4.79e-43 | 98 |
hemolymphoid system | 8.92e-38 | 108 |
adult organism | 5.81e-36 | 114 |
bone marrow | 9.47e-34 | 76 |
bone element | 6.26e-30 | 82 |
immune system | 8.22e-30 | 93 |
skeletal element | 1.66e-26 | 90 |
skeletal system | 1.43e-21 | 100 |
lateral plate mesoderm | 1.38e-17 | 203 |
neural tube | 1.34e-11 | 56 |
neural rod | 1.34e-11 | 56 |
future spinal cord | 1.34e-11 | 56 |
neural keel | 1.34e-11 | 56 |
regional part of nervous system | 1.59e-10 | 53 |
regional part of brain | 1.59e-10 | 53 |
regional part of forebrain | 1.69e-09 | 41 |
forebrain | 1.69e-09 | 41 |
anterior neural tube | 1.69e-09 | 41 |
future forebrain | 1.69e-09 | 41 |
blood | 8.15e-09 | 15 |
haemolymphatic fluid | 8.15e-09 | 15 |
organism substance | 8.15e-09 | 15 |
brain grey matter | 9.34e-08 | 34 |
gray matter | 9.34e-08 | 34 |
telencephalon | 9.93e-08 | 34 |
tissue | 2.83e-07 | 773 |
brain | 4.27e-07 | 68 |
future brain | 4.27e-07 | 68 |
regional part of telencephalon | 4.78e-07 | 32 |
cerebral hemisphere | 7.08e-07 | 32 |