FFCP PHASE1:Hg19::chr7:150554684..150554693,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=80 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-327bp_to_ENST00000480582_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_9_at_ABP1_5end | |||
|id=chr7:150554684..150554693,+ | |||
|ontology_enrichment_celltype=CL:0002541!9.56e-27!3;CL:0000453!4.95e-16!5;CL:0000313!1.15e-09!1;CL:0000990!3.86e-09!8;CL:0000451!1.46e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002541;9.40e-99;3!CL:0000453;4.34e-27;5!CL:0000349;1.99e-16;19!CL:0000990;1.46e-15;8!CL:0000451;6.30e-13;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,7.95e-99,3;CL:0000453,4.63e-27,5;CL:0000349,1.94e-16,19;CL:0000990,1.52e-15,8;CL:0000451,6.49e-13,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2152!1.15e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!9.56e-27!3;UBERON:0000920!9.56e-27!3;UBERON:0003124!5.85e-20!7;UBERON:0005631!3.90e-15!14;UBERON:0000158!3.90e-15!14;UBERON:0000160!7.46e-14!27;UBERON:0005409!1.31e-10!35;UBERON:0004911!1.15e-09!1;UBERON:0002108!3.71e-09!14;UBERON:0000478!9.29e-09!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.40e-99;3!UBERON:0000920;9.40e-99;3!UBERON:0005631;2.16e-30;10!UBERON:0000158;2.16e-30;10!UBERON:0000478;3.55e-13;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.95e-99,3;UBERON:0003124,5.22e-43,7;UBERON:0005631,5.39e-22,14;UBERON:0000158,5.39e-22,14;UBERON:0000478,3.48e-13,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78501739597879,2.83952539545773,15.991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33832370607266,1.32864840313363,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0.874238242015829,5.17349025997675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p9@ABP1 | |||
}} |
Revision as of 20:04, 22 January 2014
Short description: | p9@ABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ABP1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -327bp_to_ENST00000480582_5end |
EntrezGene: | ABP1 |
HGNC: | 80 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 7.95e-99 | 3 |
Langerhans cell | 4.63e-27 | 5 |
extraembryonic cell | 1.94e-16 | 19 |
conventional dendritic cell | 1.52e-15 | 8 |
dendritic cell | 6.49e-13 | 10 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 7.95e-99 | 3 |
chorion | 5.22e-43 | 7 |
extraembryonic membrane | 5.39e-22 | 14 |
membranous layer | 5.39e-22 | 14 |
extraembryonic structure | 3.48e-13 | 24 |