FFCP PHASE1:Hg19::chr7:150929550..150929619,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54480 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29270 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P2E5,C9JFC7,C9JZF7,G5E9W2 | |||
|association_with_transcript=0bp_to_ENST00000035307,ENST00000377851,ENST00000482173,ENST00000495645,NM_019015,uc003wjq.1,uc003wjr.1_5end | |||
|coexpression_cluster_id=C750 | |||
|description=CAGE_peak_1_at_CHPF2_5end | |||
|id=chr7:150929550..150929619,+ | |||
|ontology_enrichment_celltype=CL:0000222!7.20e-22!119;CL:0000055!1.49e-19!180;CL:0000183!5.74e-18!59;CL:0002371!2.75e-17!591;CL:0000680!1.14e-16!57;CL:0000056!1.14e-16!57;CL:0000355!1.14e-16!57;CL:0000192!1.80e-16!42;CL:0000514!1.80e-16!42;CL:0000144!4.91e-16!625;CL:0000187!9.52e-16!54;CL:0000359!8.33e-13!32;CL:0000057!1.00e-12!75;CL:0000393!3.11e-11!60;CL:0000211!3.11e-11!60;CL:0000220!5.85e-09!246;CL:0000548!1.86e-08!679;CL:0000004!1.86e-08!679;CL:0000255!1.86e-08!679;CL:0002321!2.41e-08!248;CL:0000012!3.42e-08!682;CL:0000048!3.87e-08!430;CL:0000723!1.35e-07!436;CL:0002078!3.92e-07!44;CL:0000115!7.30e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000192;3.35e-12;43!CL:0000359;4.16e-12;32!CL:0000187;8.34e-09;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.41e-22,121;CL:0000680,7.70e-17,58;CL:0000056,7.70e-17,58;CL:0000355,7.70e-17,58;CL:0000192,1.30e-16,43;CL:0000514,1.30e-16,43;CL:0000187,6.48e-16,55;CL:0000057,3.20e-13,76;CL:0000359,8.33e-13,32;CL:0000393,2.07e-11,61;CL:0000211,2.07e-11,61;CL:0002321,1.19e-08,250;CL:0000048,1.24e-08,427;CL:0000723,4.55e-08,433;CL:0002078,2.31e-07,45;CL:0000115,4.25e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;3.35e-12;43!CL:0000355;3.52e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.87e-20!79;UBERON:0007798!5.87e-20!79;UBERON:0004535!2.60e-19!110;UBERON:0000055!9.32e-19!69;UBERON:0001009!1.30e-18!113;UBERON:0004872!1.19e-17!84;UBERON:0001981!1.19e-16!60;UBERON:0007500!1.19e-16!60;UBERON:0004537!1.19e-16!60;UBERON:0006965!1.19e-16!60;UBERON:0003914!2.77e-16!118;UBERON:0001637!1.15e-15!42;UBERON:0003509!1.15e-15!42;UBERON:0004572!1.15e-15!42;UBERON:0000914!6.57e-15!83;UBERON:0002329!6.57e-15!83;UBERON:0003077!6.57e-15!83;UBERON:0003059!6.57e-15!83;UBERON:0007282!6.57e-15!83;UBERON:0009618!6.57e-15!83;UBERON:0007285!6.57e-15!83;UBERON:0000486!1.21e-14!82;UBERON:0004290!2.03e-14!70;UBERON:0005256!9.17e-14!143;UBERON:0001134!1.02e-13!61;UBERON:0002036!1.02e-13!61;UBERON:0003082!1.02e-13!61;UBERON:0004573!2.46e-13!33;UBERON:0004571!2.46e-13!33;UBERON:0002385!7.33e-13!63;UBERON:0001015!7.33e-13!63;UBERON:0000383!7.33e-13!63;UBERON:0002100!1.42e-11!216;UBERON:0000490!1.02e-10!138;UBERON:0003081!1.17e-10!216;UBERON:0000475!6.98e-10!365;UBERON:0000926!2.75e-09!448;UBERON:0004120!2.75e-09!448;UBERON:0006603!2.75e-09!448;UBERON:0000947!6.27e-08!21;UBERON:0010191!6.27e-08!21;UBERON:0000480!7.37e-08!626;UBERON:0000119!1.01e-07!312;UBERON:0000483!1.02e-07!309;UBERON:0000468!1.42e-07!659;UBERON:0000467!1.49e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.84e-12;33!UBERON:0004571;3.84e-12;33!UBERON:0001637;1.36e-11;42!UBERON:0003509;1.36e-11;42!UBERON:0004572;1.36e-11;42!UBERON:0007500;1.82e-09;56!UBERON:0001981;1.82e-09;56!UBERON:0004537;1.82e-09;56!UBERON:0000055;8.50e-09;65!UBERON:0003914;1.09e-08;74!UBERON:0002049;2.04e-08;75!UBERON:0007798;2.04e-08;75!UBERON:0000947;6.21e-08;21!UBERON:0010191;6.21e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.20e-19,78;UBERON:0007798,2.20e-19,78;UBERON:0004535,8.74e-19,109;UBERON:0000055,3.54e-18,68;UBERON:0001009,4.25e-18,112;UBERON:0007503,2.18e-17,78;UBERON:0004872,4.16e-17,83;UBERON:0003914,4.27e-16,117;UBERON:0007500,4.45e-16,59;UBERON:0001981,4.45e-16,59;UBERON:0004537,4.45e-16,59;UBERON:0006965,4.45e-16,59;UBERON:0001637,1.15e-15,42;UBERON:0003509,1.15e-15,42;UBERON:0004572,1.15e-15,42;UBERON:0007524,5.93e-15,73;UBERON:0000926,7.24e-15,315;UBERON:0004120,7.24e-15,315;UBERON:0006603,7.24e-15,315;UBERON:0000486,7.94e-15,83;UBERON:0002329,1.34e-14,71;UBERON:0003059,1.34e-14,71;UBERON:0007282,1.34e-14,71;UBERON:0004290,1.34e-14,71;UBERON:0009618,1.34e-14,71;UBERON:0003077,1.76e-14,72;UBERON:0007285,1.76e-14,72;UBERON:0001134,6.79e-14,62;UBERON:0002036,6.79e-14,62;UBERON:0003082,6.79e-14,62;UBERON:0004573,2.46e-13,33;UBERON:0004571,2.46e-13,33;UBERON:0002385,4.87e-13,64;UBERON:0001015,4.87e-13,64;UBERON:0000383,4.87e-13,64;UBERON:0005256,3.78e-12,122;UBERON:0000490,8.19e-12,148;UBERON:0003104,9.40e-12,160;UBERON:0009142,9.40e-12,160;UBERON:0002100,6.94e-11,199;UBERON:0003081,3.04e-10,203;UBERON:0000119,3.30e-08,309;UBERON:0000483,3.31e-08,306;UBERON:0000947,6.27e-08,21;UBERON:0010191,6.27e-08,21 | |||
|phase1_expression=57.773724608037,56.9507393550015,56.5227160424844,74.0542407813165,76.4303471470662,68.0424048798288,106.38594883069,40.4300718993172,43.3568142811732,50.1297230463078,90.0163506684432,67.0615012439629,94.1648112275579,40.8428964768154,69.2620515271344,59.836938034208,57.8586746903018,56.9641870502151,61.4795326476039,40.2605859911096,67.9322301843362,59.8698518023148,26.3337108160572,28.8805036903786,32.3900010154591,19.8674854944673,20.4430467730365,20.622224704184,36.5828777469481,33.3931576344575,33.9047310062206,44.1322187749885,38.554357603616,18.1179464981726,14.7962353108376,10.2361847390943,30.5344456908241,31.577738286317,39.1061672566776,38.1939132459899,20.600223630073,30.1221109397651,31.1666436837366,39.402922709262,38.1654703125698,38.328281667675,36.0265007203811,36.1827741459207,28.4929861223495,36.8246262172353,35.8624989140741,25.5400808279672,23.4427062900901,22.5919639254339,20.3139729891513,39.1544066248618,41.2088286587347,23.820689351179,26.0171308515267,26.9580382743919,23.0161365287655,46.8388846265137,35.1056037414072,45.6060483069983,22.9265298516581,32.340957807395,31.1411124497787,34.6723158054306,30.2460092683717,24.7595282963833,15.7403870684676,28.72565560703,18.3548184715713,17.7454440502031,25.7251202957703,24.53006152448,35.8328333357319,35.4417467105955,33.4309220329927,16.5307391369924,20.0905843971081,21.9196984517561,24.6394742245852,19.1148513941746,17.7901850772711,19.2028600154928,23.6233632351247,22.9900975981793,25.7807500386096,22.8972901088487,33.014352208348,29.3618594685469,31.3464047062688,34.3645454305467,15.694239763483,31.3427060882342,21.0479454021801,27.5107533924415,30.2234203529279,23.907668840867,15.9701910650459,14.6768819777767,37.0170783975031,27.2955619368675,19.4439898933393,23.0395250366966,27.3511902402666,38.1712132782512,33.0350742802091,39.7939729140896,38.9653525078046,24.0536561160094,24.46728292174,22.4734295595359,28.2245914273437,30.9334505564356,16.0952607312807,18.2122546105794,19.7355359775212,24.8481023172795,23.4390043388311,19.9594929334159,20.3276410754993,23.1655766189497,23.7368380449457,26.0454977248419,22.1704559168683,25.8056631327658,27.2788999699177,28.820056372677,85.3324032098866,63.0458808121418,37.0801429346238,66.1433648863756,65.1739283826656,78.072273719884,27.0397221997374,114.359194521119,25.5244006342983,62.0842312895179,56.6534367720663,27.3746267790219,40.4367770004722,27.0672643232633,34.0774763337417,45.4478614351087,35.3668174980181,48.4135967339844,42.3276233977295,32.6882601170017,36.5722829554737,65.3778292280655,77.0651913568859,76.3165721597413,114.942845521514,59.9757331429347,45.1429127719511,49.0991842421725,59.4129658686806,53.5552980423472,58.4102509808263,45.6163263431108,72.2423690342582,43.0165804004666,96.4068917979294,31.344204627712,45.5794626431125,46.846375881062,73.591985983624,47.4632829784064,51.4796900444444,55.3477753231466,58.1670396222488,46.6620635792512,74.5457927542978,44.1940485709383,111.753348606357,120.758217335251,61.3576301203158,59.4318256150846,84.3317066264669,108.53372130355,56.9516194781572,45.9363391757636,43.6443281312935,66.8999830190597,64.5317035417599,20.6202860013741,89.9021021271323,35.9397247573003,63.5156892345155,23.6043342273967,23.6334498777472,30.4778250543879,40.218371737214,33.5337686261127,39.8837515338455,73.6561771514873,71.2128756322244,67.351940783414,146.598100930513,27.2704504605587,34.4075929647901,44.0531943619851,52.2383368848197,47.199120553049,82.4806943397216,41.8564755860478,84.1337391380763,59.5825114803803,58.0693409177199,132.640264469306,44.0034299848134,92.4929538763809,71.6549896876621,122.869169871642,47.3543845083425,85.5750494687548,50.1671947600531,48.4938170456436,135.25865474883,41.5098644697878,48.324768808489,37.4926055136796,49.3670478269411,38.1450111867375,15.8565817968474,13.120447063827,13.1299155442556,18.4516677927359,19.4287055174234,8.75945661781992,79.7892614882061,124.145501071227,80.1182543844387,72.9057647010207,74.3535866119673,22.71490560765,27.1421351025744,21.4499816596299,21.0661487918872,24.4024977383495,23.7270619111097,17.3932387526612,20.995696768412,20.0068521612123,59.7905918245965,106.583748090619,83.9610983116056,122.01723045,20.2808055714929,42.2615703171379,44.9000329077867,15.4512084795128,22.752861130476,59.1908945529913,45.6561187299882,33.7205259772859,29.8571048062544,18.4251005865474,35.1872969735151,98.79380460156,47.6293428683402,34.5472606825729,101.675929208222,47.3521948656322,42.1316816444716,40.9046427304386,38.7200155000045,40.348849618459,18.7124924626422,23.1664222487845,31.0639129183442,27.1828118561653,49.3867456904647,31.190521393325,7.6124744297421,13.9504290486702,20.3192819957562,16.7505500884621,61.1936616391921,78.9920120210342,94.9750493017776,79.6589754920457,18.9858703933585,52.332414301484,26.9600128583108,42.7681115056763,25.5012181904242,21.3243571069181,29.4401225609496,30.6117860262835,55.8028888106599,27.941886897782,74.3312365607222,264.665769930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| |||
|short_description=p1@CHPF2 | |||
}} |
Revision as of 20:08, 22 January 2014
Short description: | p1@CHPF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHPF2_5end |
Coexpression cluster: | C750_Smooth_Mesenchymal_Fibroblast_Hepatic_Chondrocyte_Lens_tenocyte |
Association with transcript: | 0bp_to_ENST00000035307, ENST00000377851, ENST00000482173, ENST00000495645, NM_019015, uc003wjq.1, uc003wjr.1_5end |
EntrezGene: | CHPF2 |
HGNC: | 29270 |
UniProt: | Q9P2E5C9JFC7C9JZF7G5E9W2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.41e-22 | 121 |
muscle precursor cell | 7.70e-17 | 58 |
myoblast | 7.70e-17 | 58 |
multi-potent skeletal muscle stem cell | 7.70e-17 | 58 |
smooth muscle cell | 1.30e-16 | 43 |
smooth muscle myoblast | 1.30e-16 | 43 |
muscle cell | 6.48e-16 | 55 |
fibroblast | 3.20e-13 | 76 |
vascular associated smooth muscle cell | 8.33e-13 | 32 |
electrically responsive cell | 2.07e-11 | 61 |
electrically active cell | 2.07e-11 | 61 |
embryonic cell | 1.19e-08 | 250 |
multi fate stem cell | 1.24e-08 | 427 |
somatic stem cell | 4.55e-08 | 433 |
meso-epithelial cell | 2.31e-07 | 45 |
endothelial cell | 4.25e-07 | 36 |