FFCP PHASE1:Hg19::chr8:9952973..9952986,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4482 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7377 | |||
|TSSclassifier=strong | |||
|UniProt=E5RJK1 | |||
|association_with_transcript=-74bp_to_ENST00000522907_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_10_at_MSRA_5end | |||
|id=chr8:9952973..9952986,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.72e-10;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.68e-55;3 | |||
|ontology_enrichment_disease=DOID:171!9.34e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.72e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.72e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.64e-79!57;UBERON:0005068!1.64e-79!57;UBERON:0006241!1.64e-79!57;UBERON:0007135!1.64e-79!57;UBERON:0002616!1.41e-76!59;UBERON:0002619!5.75e-71!22;UBERON:0002020!8.01e-70!34;UBERON:0003528!8.01e-70!34;UBERON:0001869!7.06e-69!32;UBERON:0000955!4.23e-67!69;UBERON:0006238!4.23e-67!69;UBERON:0001017!4.24e-66!82;UBERON:0001893!1.41e-64!34;UBERON:0001950!3.20e-63!20;UBERON:0005743!1.11e-62!86;UBERON:0000956!3.71e-62!25;UBERON:0000203!3.71e-62!25;UBERON:0002791!2.95e-61!33;UBERON:0000073!2.69e-59!94;UBERON:0001016!2.69e-59!94;UBERON:0002346!3.51e-57!90;UBERON:0002780!4.28e-57!41;UBERON:0001890!4.28e-57!41;UBERON:0006240!4.28e-57!41;UBERON:0003080!1.30e-55!42;UBERON:0003075!3.64e-50!86;UBERON:0007284!3.64e-50!86;UBERON:0003056!1.50e-36!61;UBERON:0000033!1.50e-36!123;UBERON:0000153!1.79e-34!129;UBERON:0007811!1.79e-34!129;UBERON:0000924!4.12e-34!173;UBERON:0006601!4.12e-34!173;UBERON:0007023!2.99e-31!115;UBERON:0004733!1.71e-30!12;UBERON:0002028!1.71e-30!12;UBERON:0007277!1.71e-30!12;UBERON:0004121!2.09e-29!169;UBERON:0004732!5.38e-28!13;UBERON:0002680!1.12e-26!9;UBERON:0001895!1.12e-26!9;UBERON:0010092!1.12e-26!9;UBERON:0003076!5.34e-24!15;UBERON:0003057!5.34e-24!15;UBERON:0001871!7.89e-24!7;UBERON:0000200!2.58e-23!6;UBERON:0000349!1.01e-20!5;UBERON:0002021!1.44e-19!5;UBERON:0000025!1.11e-17!194;UBERON:0002037!8.97e-17!6;UBERON:0006215!8.97e-17!6;UBERON:0000064!1.01e-14!219;UBERON:0004111!1.27e-13!241;UBERON:0002771!9.53e-13!3;UBERON:0001872!1.66e-12!5;UBERON:0000988!9.44e-12!3;UBERON:0002298!1.64e-11!8;UBERON:0002420!4.34e-11!9;UBERON:0007245!4.34e-11!9;UBERON:0010009!4.34e-11!9;UBERON:0010011!4.34e-11!9;UBERON:0000454!4.34e-11!9;UBERON:0000477!5.15e-11!286;UBERON:0002308!1.47e-10!9;UBERON:0000125!1.47e-10!9;UBERON:0000369!1.67e-09!4;UBERON:0002435!1.67e-09!4;UBERON:0000204!1.67e-09!4;UBERON:0010082!1.67e-09!4;UBERON:0001876!2.05e-09!2;UBERON:0001954!2.05e-09!2;UBERON:0003022!2.05e-09!2;UBERON:0002421!2.05e-09!2;UBERON:0002600!2.05e-09!2;UBERON:0001870!4.79e-09!2;UBERON:0000483!8.73e-09!309;UBERON:0000119!1.27e-08!312;UBERON:0002148!2.04e-08!2;UBERON:0009662!2.04e-08!2;UBERON:0000475!5.08e-08!365;UBERON:0000481!1.44e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;7.77e-28;6!UBERON:0002619;1.60e-19;22!UBERON:0002346;2.71e-19;4!UBERON:0000923;2.71e-19;4!UBERON:0010316;2.71e-19;4!UBERON:0005291;2.71e-19;4!UBERON:0002680;8.16e-19;9!UBERON:0001895;8.16e-19;9!UBERON:0000956;2.73e-17;25!UBERON:0000203;2.73e-17;25!UBERON:0002050;1.21e-15;5!UBERON:0005423;1.21e-15;5!UBERON:0000349;2.70e-15;5!UBERON:0004733;2.75e-14;12!UBERON:0002028;2.75e-14;12!UBERON:0000073;3.79e-14;53!UBERON:0002616;3.79e-14;53!UBERON:0001950;5.46e-14;20!UBERON:0004732;3.07e-13;13!UBERON:0000200;6.50e-13;6!UBERON:0002791;1.43e-12;32!UBERON:0001869;1.43e-12;32!UBERON:0003528;1.88e-12;34!UBERON:0002020;1.88e-12;34!UBERON:0001871;3.30e-11;6!UBERON:0001893;4.89e-11;34!UBERON:0000955;9.94e-11;68!UBERON:0002771;2.72e-10;2!UBERON:0001876;2.72e-10;2!UBERON:0001954;2.72e-10;2!UBERON:0002702;2.72e-10;2!UBERON:0003022;2.72e-10;2!UBERON:0002421;2.72e-10;2!UBERON:0002600;2.72e-10;2!UBERON:0002780;7.35e-10;41!UBERON:0001890;7.35e-10;41!UBERON:0001016;3.08e-09;83!UBERON:0001017;1.18e-08;75!UBERON:0001870;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,7.10e-28,6;UBERON:0006215,7.10e-28,6;UBERON:0000073,7.40e-21,53;UBERON:0002616,7.40e-21,53;UBERON:0002346,4.04e-20,86;UBERON:0001049,9.67e-20,56;UBERON:0005068,9.67e-20,56;UBERON:0006241,9.67e-20,56;UBERON:0007135,9.67e-20,56;UBERON:0002619,1.60e-19,22;UBERON:0002680,7.68e-19,9;UBERON:0001895,7.68e-19,9;UBERON:0010092,7.68e-19,9;UBERON:0000956,2.73e-17,25;UBERON:0000203,2.73e-17,25;UBERON:0001017,5.58e-17,81;UBERON:0000955,5.29e-16,68;UBERON:0006238,5.29e-16,68;UBERON:0000349,2.70e-15,5;UBERON:0001016,2.88e-15,89;UBERON:0004733,2.63e-14,12;UBERON:0002028,2.63e-14,12;UBERON:0007277,2.63e-14,12;UBERON:0001950,5.84e-14,20;UBERON:0002791,1.18e-13,32;UBERON:0001869,1.18e-13,32;UBERON:0003075,1.98e-13,82;UBERON:0007284,1.98e-13,82;UBERON:0004732,2.95e-13,13;UBERON:0000200,6.50e-13,6;UBERON:0003528,7.02e-13,34;UBERON:0002020,7.02e-13,34;UBERON:0001893,7.02e-13,34;UBERON:0004121,6.88e-12,171;UBERON:0000924,6.88e-12,171;UBERON:0006601,6.88e-12,171;UBERON:0003076,1.42e-11,15;UBERON:0003057,1.42e-11,15;UBERON:0001871,4.27e-11,6;UBERON:0002780,9.49e-11,41;UBERON:0001890,9.49e-11,41;UBERON:0003080,9.49e-11,41;UBERON:0006240,9.49e-11,41;UBERON:0010371,1.63e-10,104;UBERON:0002702,2.07e-10,2;UBERON:0001954,2.27e-10,2;UBERON:0003022,2.27e-10,2;UBERON:0002421,2.27e-10,2;UBERON:0002600,2.27e-10,2;UBERON:0001876,3.27e-10,2;UBERON:0002771,3.58e-10,2;UBERON:0007023,1.21e-09,114;UBERON:0010314,3.46e-08,132;UBERON:0001870,2.32e-07,3;UBERON:0003056,2.71e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.1253553312841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.583209226766509,0.520874984799877,0,0.723578631752448,1.52581736317083,8.62518227463552,2.36438095162838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.817220436669454,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.610131324509816,0.3755727921195,0,0.443716206147409,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895260599125562,0,0,0,0,3.82634856183029,0.247871528518004,0,0,0,0,0,0,0.513833800771676,1.41696576325585,0.478901577171454,0.205116364240755,0.504143392443436,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.413373593002368,0.443910671357348,0.546974809018219,0,0,4.57265235335014,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@MSRA | |||
}} |
Revision as of 20:37, 22 January 2014
Short description: | p10@MSRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MSRA_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -74bp_to_ENST00000522907_5end |
EntrezGene: | MSRA |
HGNC: | 7377 |
UniProt: | E5RJK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.72e-08 | 10 |