FFCP PHASE1:Hg19::chr9:139937688..139937698,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56654 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7899 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NQX5 | |||
|association_with_transcript=-163bp_to_AF283247_5end | |||
|description=CAGE_peak_15_at_NPDC1_5end | |||
|id=chr9:139937688..139937698,- | |||
|ontology_enrichment_celltype=CL:1000413!1.11e-27!9;CL:0002544!6.00e-17!6;CL:0000071!4.02e-13!18;CL:0002546!4.02e-13!18;CL:0002139!6.12e-12!24;CL:0000115!1.17e-11!35;CL:0002078!8.56e-09!44 | |||
|ontology_enrichment_celltype_v019=CL:1000413;4.43e-44;9!CL:0002544;1.51e-37;6!CL:0000115;8.46e-24;36!CL:0000071;2.27e-22;18!CL:0002139;6.42e-17;24!CL:0002078;1.90e-16;45!CL:0002262;1.07e-13;2!CL:0002545;1.07e-13;2!CL:1000398;1.07e-13;2!CL:0000213;3.91e-11;58!CL:0000215;3.91e-11;58!CL:0000076;4.21e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,3.97e-44,9;CL:0002544,1.72e-37,6;CL:0000115,8.51e-25,36;CL:0000071,2.15e-22,18;CL:0002546,2.15e-22,18;CL:0002078,6.90e-20,45;CL:0002139,6.17e-17,24;CL:0000213,1.79e-15,58;CL:0000215,1.79e-15,58;CL:0002262,9.40e-14,2;CL:1000398,9.40e-14,2;CL:0002545,1.21e-13,2;CL:0000222,1.89e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;2.27e-22;18 | |||
|ontology_enrichment_disease=DOID:1036!8.93e-08!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003915!1.11e-27!9;UBERON:0004700!1.11e-27!9;UBERON:0001917!1.11e-27!9;UBERON:0001986!4.02e-13!18;UBERON:0004638!4.02e-13!18;UBERON:0004852!4.02e-13!18;UBERON:0000487!1.78e-10!22;UBERON:0001637!4.50e-09!42;UBERON:0003509!4.50e-09!42;UBERON:0004572!4.50e-09!42;UBERON:0006914!4.74e-09!25;UBERON:0000947!2.54e-08!21;UBERON:0010191!2.54e-08!21;UBERON:0004872!4.03e-08!84;UBERON:0001981!6.53e-07!60;UBERON:0007500!6.53e-07!60;UBERON:0004537!6.53e-07!60;UBERON:0006965!6.53e-07!60;UBERON:0000055!8.88e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;4.43e-44;9!UBERON:0004700;4.43e-44;9!UBERON:0001917;4.43e-44;9!UBERON:0004638;2.27e-22;18!UBERON:0001986;2.27e-22;18!UBERON:0004852;2.27e-22;18!UBERON:0000487;2.08e-18;22!UBERON:0006914;2.91e-16;25!UBERON:0001281;1.07e-13;2!UBERON:0003497;1.07e-13;2!UBERON:0003909;1.07e-13;2!UBERON:0005800;1.07e-13;2!UBERON:0003835;1.07e-13;2!UBERON:0001515;1.07e-13;2!UBERON:0000490;5.63e-12;33!UBERON:0000947;2.70e-11;21!UBERON:0010191;2.70e-11;21!UBERON:0001280;1.41e-09;3!UBERON:0004647;1.41e-09;3!UBERON:0001637;5.58e-09;42!UBERON:0003509;5.58e-09;42!UBERON:0004572;5.58e-09;42!UBERON:0004573;1.04e-07;33!UBERON:0004571;1.04e-07;33!UBERON:0000353;1.44e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,3.97e-44,9;UBERON:0004700,3.97e-44,9;UBERON:0001917,3.97e-44,9;UBERON:0004638,2.15e-22,18;UBERON:0001986,2.15e-22,18;UBERON:0004852,2.15e-22,18;UBERON:0000487,1.99e-18,22;UBERON:0006914,2.79e-16,25;UBERON:0001281,9.40e-14,2;UBERON:0003497,9.40e-14,2;UBERON:0003909,9.40e-14,2;UBERON:0003835,9.40e-14,2;UBERON:0005800,1.21e-13,2;UBERON:0001515,1.21e-13,2;UBERON:0000947,2.80e-11,21;UBERON:0010191,2.80e-11,21;UBERON:0007500,9.48e-11,59;UBERON:0001981,9.48e-11,59;UBERON:0004537,9.48e-11,59;UBERON:0006965,9.48e-11,59;UBERON:0001637,7.06e-10,42;UBERON:0003509,7.06e-10,42;UBERON:0004572,7.06e-10,42;UBERON:0001280,1.30e-09,3;UBERON:0004647,1.30e-09,3;UBERON:0005171,1.30e-09,3;UBERON:0000055,2.35e-09,68;UBERON:0002049,3.53e-08,78;UBERON:0007798,3.53e-08,78;UBERON:0003914,1.05e-07,117;UBERON:0004872,1.07e-07,83;UBERON:0000353,1.40e-07,15;UBERON:0004573,2.07e-07,33;UBERON:0004571,2.07e-07,33 | |||
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|short_description=p15@NPDC1 | |||
}} |
Revision as of 04:16, 23 January 2014
Short description: | p15@NPDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_NPDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -163bp_to_AF283247_5end |
EntrezGene: | NPDC1 |
HGNC: | 7899 |
UniProt: | Q9NQX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 3.97e-44 | 9 |
aortic endothelial cell | 1.72e-37 | 6 |
endothelial cell | 8.51e-25 | 36 |
blood vessel endothelial cell | 2.15e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.15e-22 | 18 |
meso-epithelial cell | 6.90e-20 | 45 |
endothelial cell of vascular tree | 6.17e-17 | 24 |
lining cell | 1.79e-15 | 58 |
barrier cell | 1.79e-15 | 58 |
endothelial cell of sinusoid | 9.40e-14 | 2 |
endothelial cell of hepatic sinusoid | 9.40e-14 | 2 |
thoracic aorta endothelial cell | 1.21e-13 | 2 |
mesodermal cell | 1.89e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 3.97e-44 | 9 |
arterial system endothelium | 3.97e-44 | 9 |
endothelium of artery | 3.97e-44 | 9 |
blood vessel endothelium | 2.15e-22 | 18 |
endothelium | 2.15e-22 | 18 |
cardiovascular system endothelium | 2.15e-22 | 18 |
simple squamous epithelium | 1.99e-18 | 22 |
squamous epithelium | 2.79e-16 | 25 |
hepatic sinusoid | 9.40e-14 | 2 |
abdomen blood vessel | 9.40e-14 | 2 |
sinusoid | 9.40e-14 | 2 |
abdominal segment blood vessel | 9.40e-14 | 2 |
segment of aorta | 1.21e-13 | 2 |
thoracic aorta | 1.21e-13 | 2 |
aorta | 2.80e-11 | 21 |
aortic system | 2.80e-11 | 21 |
epithelial tube open at both ends | 9.48e-11 | 59 |
blood vessel | 9.48e-11 | 59 |
blood vasculature | 9.48e-11 | 59 |
vascular cord | 9.48e-11 | 59 |
artery | 7.06e-10 | 42 |
arterial blood vessel | 7.06e-10 | 42 |
arterial system | 7.06e-10 | 42 |
liver parenchyma | 1.30e-09 | 3 |
liver lobule | 1.30e-09 | 3 |
hepatic duct | 1.30e-09 | 3 |
vessel | 2.35e-09 | 68 |
vasculature | 3.53e-08 | 78 |
vascular system | 3.53e-08 | 78 |
epithelial tube | 1.05e-07 | 117 |
splanchnic layer of lateral plate mesoderm | 1.07e-07 | 83 |
parenchyma | 1.40e-07 | 15 |
systemic artery | 2.07e-07 | 33 |
systemic arterial system | 2.07e-07 | 33 |