FFCP PHASE1:Hg19::chrX:20075081..20075102,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=256714 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25899 | |||
|TSSclassifier=not | |||
|UniProt=Q96T17 | |||
|association_with_transcript=-172bp_to_uc004czq.1_5end | |||
|coexpression_cluster_id=C4868 | |||
|description=CAGE_peak_6_at_MAP7D2_5end | |||
|id=chrX:20075081..20075102,- | |||
|ontology_enrichment_celltype=CL:0000242!2.76e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.15e-20;2!CL:0000242;2.15e-20;2!CL:0000312;1.03e-08;5!CL:0000240;2.12e-07;6!CL:0000311;2.12e-07;6!CL:0000079;2.12e-07;6!CL:0000237;2.12e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.26e-20,2;CL:0000312,1.05e-08,5;CL:0000240,2.16e-07,6;CL:0000311,2.16e-07,6;CL:0000079,2.16e-07,6;CL:0000237,2.16e-07,6;CL:0000036,2.16e-07,6;CL:0000357,2.16e-07,6;CL:0000114,2.16e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.17e-28;3!CL:0000357;2.12e-07;6!CL:0000114;2.12e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.91e-30!57;UBERON:0005068!3.91e-30!57;UBERON:0006241!3.91e-30!57;UBERON:0007135!3.91e-30!57;UBERON:0002346!4.40e-28!90;UBERON:0003076!4.19e-26!15;UBERON:0003057!4.19e-26!15;UBERON:0003075!8.15e-26!86;UBERON:0007284!8.15e-26!86;UBERON:0005743!1.48e-25!86;UBERON:0001017!3.02e-25!82;UBERON:0002616!3.89e-24!59;UBERON:0007023!5.35e-23!115;UBERON:0000955!5.91e-23!69;UBERON:0006238!5.91e-23!69;UBERON:0000073!2.41e-22!94;UBERON:0001016!2.41e-22!94;UBERON:0004733!8.34e-19!12;UBERON:0002028!8.34e-19!12;UBERON:0007277!8.34e-19!12;UBERON:0000033!1.55e-17!123;UBERON:0000153!1.88e-17!129;UBERON:0007811!1.88e-17!129;UBERON:0004732!3.31e-17!13;UBERON:0000924!7.16e-17!173;UBERON:0006601!7.16e-17!173;UBERON:0001950!1.67e-15!20;UBERON:0002020!1.96e-15!34;UBERON:0003528!1.96e-15!34;UBERON:0004121!3.00e-15!169;UBERON:0001869!2.57e-14!32;UBERON:0002619!6.41e-14!22;UBERON:0001893!2.71e-13!34;UBERON:0002298!5.05e-13!8;UBERON:0002780!3.05e-12!41;UBERON:0001890!3.05e-12!41;UBERON:0006240!3.05e-12!41;UBERON:0000956!5.28e-12!25;UBERON:0000203!5.28e-12!25;UBERON:0003056!5.99e-12!61;UBERON:0003080!7.22e-12!42;UBERON:0002791!8.55e-12!33;UBERON:0002680!1.46e-11!9;UBERON:0001895!1.46e-11!9;UBERON:0010092!1.46e-11!9;UBERON:0000200!3.22e-11!6;UBERON:0001896!1.09e-09!3;UBERON:0005290!1.09e-09!3;UBERON:0010096!1.09e-09!3;UBERON:0000988!1.16e-09!3;UBERON:0002240!2.36e-09!3;UBERON:0002771!1.36e-08!3;UBERON:0001871!5.61e-08!7;UBERON:0002148!8.10e-07!2;UBERON:0009662!8.10e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;4.43e-38;12!UBERON:0002028;4.43e-38;12!UBERON:0004732;4.14e-35;13!UBERON:0002680;2.30e-26;9!UBERON:0001895;2.30e-26;9!UBERON:0002298;5.76e-26;6!UBERON:0002037;1.16e-14;6!UBERON:0000988;4.72e-14;3!UBERON:0001896;1.13e-13;3!UBERON:0005290;1.13e-13;3!UBERON:0000073;5.78e-07;53!UBERON:0002616;5.78e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,2.04e-39,15;UBERON:0003057,2.04e-39,15;UBERON:0004733,4.43e-38,12;UBERON:0002028,4.43e-38,12;UBERON:0007277,4.43e-38,12;UBERON:0004732,4.14e-35,13;UBERON:0002680,2.24e-26,9;UBERON:0001895,2.24e-26,9;UBERON:0010092,2.24e-26,9;UBERON:0002298,5.95e-26,6;UBERON:0002037,1.13e-14,6;UBERON:0006215,1.13e-14,6;UBERON:0000988,4.72e-14,3;UBERON:0001896,1.16e-13,3;UBERON:0005290,1.16e-13,3;UBERON:0010096,1.16e-13,3;UBERON:0001049,2.95e-12,56;UBERON:0005068,2.95e-12,56;UBERON:0006241,2.95e-12,56;UBERON:0007135,2.95e-12,56;UBERON:0000073,2.65e-10,53;UBERON:0002616,2.65e-10,53;UBERON:0001017,6.39e-10,81;UBERON:0000955,9.95e-10,68;UBERON:0006238,9.95e-10,68;UBERON:0002346,1.74e-09,86;UBERON:0010371,2.80e-09,104;UBERON:0001016,8.30e-09,89;UBERON:0003075,4.95e-08,82;UBERON:0007284,4.95e-08,82;UBERON:0004121,3.77e-07,171;UBERON:0000924,3.77e-07,171;UBERON:0006601,3.77e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27252499660864,2.79142004129816,3.7781175030566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,1.23084805461069,0,0,0,0,0,0,0,0,1.02044907978036,0,0,0,0,0.1137934482855,1.27126825146383,0,17.5819120353147,2.04123229368278,0,0,0.120596438625408,1.52581736317083,5.75012151642368,1.18219047581419,0.658156191461918,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.451961481561065,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425246896606173,0,0.551639951094387,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,11.506183116178,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0.244052529803926,0.250381861413,0.573409195690071,2.21858103073705,4.16045899707269,0,0,0,0,0,14.5183820800133,3.76794674388145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0.737318726261158,0,0.19998739585493,0,0.344429959321631,0,0,0,0,0,0,0,0,30.7215879216786,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0.645902582527404,0,0.0981477185010256,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.607838261565552,0,0.620060389503552,0.253663240775627,0,0,0,0.351742488719241,0,2.67850917939143,0,0,0,0,0,0,10.7392178103394,0.394636641377094,0,0,0.078493092850514,0,0,0,8.20524846630761,0,0.929195074296532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.981542335574726,0.297046400327086,1.6906229103336,0,0,0,0.199882311849858,0.178553938605658,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p6@MAP7D2 | |||
}} |
Revision as of 05:02, 23 January 2014
Short description: | p6@MAP7D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MAP7D2_5end |
Coexpression cluster: | C4868_neuroectodermal_carcinoid_merkel_locus_pons_renal_B |
Association with transcript: | -172bp_to_uc004czq.1_5end |
EntrezGene: | MAP7D2 |
HGNC: | 25899 |
UniProt: | Q96T17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.26e-20 | 2 |
keratinocyte | 1.05e-08 | 5 |
stratified squamous epithelial cell | 2.16e-07 | 6 |
keratin accumulating cell | 2.16e-07 | 6 |
stratified epithelial cell | 2.16e-07 | 6 |
keratinizing barrier epithelial cell | 2.16e-07 | 6 |
epithelial fate stem cell | 2.16e-07 | 6 |
stratified epithelial stem cell | 2.16e-07 | 6 |
surface ectodermal cell | 2.16e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 2.04e-39 | 15 |
chordal neural plate | 2.04e-39 | 15 |
segmental subdivision of hindbrain | 4.43e-38 | 12 |
hindbrain | 4.43e-38 | 12 |
presumptive hindbrain | 4.43e-38 | 12 |
segmental subdivision of nervous system | 4.14e-35 | 13 |
regional part of metencephalon | 2.24e-26 | 9 |
metencephalon | 2.24e-26 | 9 |
future metencephalon | 2.24e-26 | 9 |
brainstem | 5.95e-26 | 6 |
cerebellum | 1.13e-14 | 6 |
rhombic lip | 1.13e-14 | 6 |
pons | 4.72e-14 | 3 |
medulla oblongata | 1.16e-13 | 3 |
myelencephalon | 1.16e-13 | 3 |
future myelencephalon | 1.16e-13 | 3 |
neural tube | 2.95e-12 | 56 |
neural rod | 2.95e-12 | 56 |
future spinal cord | 2.95e-12 | 56 |
neural keel | 2.95e-12 | 56 |
regional part of nervous system | 2.65e-10 | 53 |
regional part of brain | 2.65e-10 | 53 |
central nervous system | 6.39e-10 | 81 |
brain | 9.95e-10 | 68 |
future brain | 9.95e-10 | 68 |
neurectoderm | 1.74e-09 | 86 |
ecto-epithelium | 2.80e-09 | 104 |
nervous system | 8.30e-09 | 89 |
neural plate | 4.95e-08 | 82 |
presumptive neural plate | 4.95e-08 | 82 |
ectoderm-derived structure | 3.77e-07 | 171 |
ectoderm | 3.77e-07 | 171 |
presumptive ectoderm | 3.77e-07 | 171 |