CL:0000319: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0000319 | |||
|is_a=CL:0000159 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=mucus secreting cell | |||
|namespace=cell | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
| | |subset= | ||
| | |synonym="mucous cell" EXACT [] | ||
|union_of= | |||
|xref=BTO:0003689 | |||
}} | }} |
Revision as of 10:16, 12 September 2014
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000159(seromucus secreting cell) |
---|
Children
derives from: | FF:0102788 (mucinous adenocarcinoma cell sample) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10648-109A9 (mucinous adenocarcinoma cell line:JHOM-1)
- 10651-109B3
Mouse (Mus musculus)
- 10648-109A9 (mucinous adenocarcinoma cell line:JHOM-1)
- 10651-109B3
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000319 (mucus secreting cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data