CL:0000792: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="A CD4-positive, CD25-positive, alpha-beta T cell that regulates overall immune responses as well as the responses of other T cell subsets through direct cell-cell contact and cytokine release." [GOC:add, GOC:tfm, ISBN:0781735149, PMID:19464985] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0000792 | |||
|is_a=CL:0000624 ;;CL:0000815 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=CD4-positive, CD25-positive, alpha-beta regulatory T cell | |||
|namespace=cell;;efo | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
| | |subset= | ||
| | |synonym="CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte" EXACT [];;"CD4-positive, CD25-positive, alpha-beta regulatory T-cell" EXACT [];;"CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte" EXACT [];;"suppressor T cell" BROAD [];;"suppressor T lymphocyte" BROAD [];;"suppressor T-cell" BROAD [];;"suppressor T-lymphocyte" BROAD [] | ||
|union_of= | |||
|xref=FMA:84070 | |||
}} | }} | ||
Revision as of 10:21, 12 September 2014
| Name: | CD4-positive, CD25-positive, alpha-beta regulatory T cell | |
|---|---|---|
| Namespace: | cell;;efo | |
| Definition: | "A CD4-positive, CD25-positive, alpha-beta T cell that regulates overall immune responses as well as the responses of other T cell subsets through direct cell-cell contact and cytokine release." [GOC:add, GOC:tfm, ISBN:0781735149, PMID:19464985] | |
| Xrefs: |
| |
| Synonyms: |
"CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte" EXACT [] "CD4-positive, CD25-positive, alpha-beta regulatory T-cell" EXACT [] "CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte" EXACT [] "suppressor T cell" BROAD [] "suppressor T lymphocyte" BROAD [] "suppressor T-cell" BROAD [] "suppressor T-lymphocyte" BROAD [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000624(CD4-positive, alpha-beta T cell),CL:0000815(regulatory T cell) |
|---|
Children
| is a: | CL:0002677 (naive regulatory T cell),CL:0002678 (memory regulatory T cell) |
|---|---|
| derives from: | FF:0011454 (CD4-positiveCD25-positive regulatory T cells (C57BL_6J) sample),FF:0011455 (CD4-positiveCD25-positive regulatory T cells (Balb_cAJcl) sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11780-124A7 (CD4+CD25+CD45RA+ naive regulatory T cells, donor1)
- 11782-124A9 (CD4+CD25+CD45RA- memory regulatory T cells, donor1)
- 11814-124E5 (CD4+CD25+ regulatory T cells, pool1 (C57BL_6J))
- 11818-124E9 (CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl))
- 11945-126B1 (CD4+CD25+ regulatory T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL 6J))
Mouse (Mus musculus)
- 11780-124A7 (CD4+CD25+CD45RA+ naive regulatory T cells, donor1)
- 11782-124A9 (CD4+CD25+CD45RA- memory regulatory T cells, donor1)
- 11814-124E5 (CD4+CD25+ regulatory T cells, pool1 (C57BL_6J))
- 11818-124E9 (CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl))
- 11945-126B1 (CD4+CD25+ regulatory T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL 6J))
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000792 (CD4-positive, CD25-positive, alpha-beta regulatory T cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
