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DOID:171: Difference between revisions

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{{DOID
{{DOID
|id=DOID:171
|alt_id=
|name=neuroectodermal tumor
|namespace=disease_ontology
|def=
|xref=MSH:D017599;;NCI:C3716;;SNOMEDCT_2010_1_31:253096008;;SNOMEDCT_2010_1_31:73676002;;UMLS_CUI:C0206093
|is_a=DOID:3095
|synonym="Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:253096008];;"Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:73676002];;"primitive Neuroectodermal neoplasm" EXACT [NCI2004_11_17:C3716]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:171
|is_a=DOID:3095
|is_obsolete=
|located_in=
|located_in=
|name=neuroectodermal tumor
|namespace=disease_ontology
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym="Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:253096008];;"Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:73676002];;"primitive Neuroectodermal neoplasm" EXACT [NCI2004_11_17:C3716]
|union_of=
|xref=MSH:D017599;;NCI:C3716;;SNOMEDCT_2010_1_31:253096008;;SNOMEDCT_2010_1_31:73676002;;UMLS_CUI:C0206093
}}
}}

Revision as of 10:33, 12 September 2014

Name:neuroectodermal tumor
Namespace:disease_ontology
Xrefs:
links:

MSH:D017599
NCI:C3716
SNOMEDCT_2010_1_31:253096008
SNOMEDCT_2010_1_31:73676002

UMLS_CUI:C0206093
Synonyms: "Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:253096008]
"Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:73676002]
"primitive Neuroectodermal neoplasm" EXACT [NCI2004_11_17:C3716]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:3095(germ cell and embryonal cancer)



Children


is a:FF:10637-108I7 (neuroectodermal tumor cell line:FU-RPNT-1),FF:10663-109C6 (neuroectodermal tumor cell line:FU-RPNT-2),FF:10697-109G4 (peripheral neuroectodermal tumor cell line:KU-SN),FF:10774-110F9 (neuroectodermal tumor cell line:TASK1),DOID:169 (neuroendocrine tumor)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:171 (neuroectodermal tumor), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data