UBERON:0004140: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=note that this term denotes the primary heart field; GO:0003128 denotes the superclass of primary and secondary: specific region of the lateral mesoderm into the area which will form the primary beating heart tube[GO:0003138] | |comment=note that this term denotes the primary heart field; GO:0003128 denotes the superclass of primary and secondary: specific region of the lateral mesoderm into the area which will form the primary beating heart tube[GO:0003138] | ||
|created_by= | |created_by= | ||
| | |def="a specific region of the lateral mesoderm in which the heart will develop." [GO:0003128] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0004140 | |||
|is_a=UBERON:0004120 ;;UBERON:0005291 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=heart field | |||
|namespace= | |||
|obo_creation_date= | |||
|part_of=UBERON:0003081 | |part_of=UBERON:0003081 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="primary heart field" EXACT [PMID:17276708, XAO:0004185] | ||
|union_of= | |||
|xref=XAO:0004185 | |||
}} | }} |
Revision as of 11:28, 12 September 2014
Name: | heart field | |
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Definition: | "a specific region of the lateral mesoderm in which the heart will develop." [GO:0003128] | |
Xrefs: |
| |
Synonyms: | "primary heart field" EXACT [PMID:17276708, XAO:0004185] | |
Comments: | note that this term denotes the primary heart field; GO:0003128 denotes the superclass of primary and secondary: specific region of the lateral mesoderm into the area which will form the primary beating heart tube[GO:0003138] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0004120(mesoderm-derived structure),UBERON:0005291(embryonic tissue) |
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part_of: | UBERON:0003081(lateral plate mesoderm) |
Children
develops from: | UBERON:0002084 (heart left ventricle),UBERON:0003084 (heart primordium) |
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part of: | UBERON:0007005 (cardiac mesoderm) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004140 (heart field), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data