CL:0000164: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=enteroendocrine cell | |name=enteroendocrine cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:30, 12 September 2014
| Name: | enteroendocrine cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An endocrine cell that is located in the epithelium of the gastrointestinal tract or in the pancreas." [GOC:tfm, SANBI:mhl] | ||
| Xrefs: |
|
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000150(glandular epithelial cell),CL:0000163(endocrine cell) |
|---|
Children
| is a: | CL:0000169 (type B pancreatic cell),CL:0000502 (type D enteroendocrine cell),CL:0002280 (type N enteroendocrine cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10460-106H1
- 10585-108C9
- 10781-110G7 (somatostatinoma cell line:QGP-1)
Mouse (Mus musculus)
- 10460-106H1
- 10585-108C9
- 10781-110G7 (somatostatinoma cell line:QGP-1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000164 (enteroendocrine cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:120200137..120200154,+#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr10:120200137..120200154, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:193186161..193186169,-#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr1:193186161..193186169, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr9:96678236..96678246,-#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr9:96678236..96678246, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr20:20173664..20173680,+#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr20:20173664..20173680, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr9:77257468..77257474,-#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr9:77257468..77257474, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr6:50692244..50692251,+#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr6:50692244..50692251, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:193232144..193232147,+#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr1:193232144..193232147, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:120200137..120200154,+#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr10:120200137..120200154, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr20:20173664..20173680,+#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr20:20173664..20173680, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr9:96678236..96678246,-#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr9:96678236..96678246, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:193186161..193186169,-#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr1:193186161..193186169, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:193232079..193232084,+#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr1:193232079..193232084, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr9:77257468..77257474,-#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr9:77257468..77257474, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr12:70464665..70464668,+#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr12:70464665..70464668, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr18:56815879..56815901,+#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr18:56815879..56815901, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr18:56815879..56815901,+#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr18:56815879..56815901, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr12:70464665..70464668,+#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr12:70464665..70464668, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:193232079..193232084,+#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr1:193232079..193232084, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr6:50692244..50692251,+#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr6:50692244..50692251, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:193232144..193232147,+#_52dff02d47d8f4be02f564bb4a8ae3a8 | p@chr1:193232144..193232147, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:154858221..154858224,-#_51365aaaa4fb8be05de624c4b74063fa | p@chr6:154858221..154858224, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:173014804..173014812,+#_51365aaaa4fb8be05de624c4b74063fa | p@chr4:173014804..173014812, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr9:77257424..77257435,-#_51365aaaa4fb8be05de624c4b74063fa | p@chr9:77257424..77257435, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:70464675..70464680,+#_51365aaaa4fb8be05de624c4b74063fa | p@chr12:70464675..70464680, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:161970049..161970057,-#_51365aaaa4fb8be05de624c4b74063fa | p3@GU361471 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:193232096..193232117,+#_51365aaaa4fb8be05de624c4b74063fa | p@chr1:193232096..193232117, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:70464593..70464598,+#_51365aaaa4fb8be05de624c4b74063fa | p@chr12:70464593..70464598, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:154858221..154858224,-#_51365aaaa4fb8be05de624c4b74063fa | p@chr6:154858221..154858224, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:173014804..173014812,+#_51365aaaa4fb8be05de624c4b74063fa | p@chr4:173014804..173014812, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:154858237..154858245,-#_51365aaaa4fb8be05de624c4b74063fa | p@chr6:154858237..154858245, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:193186195..193186210,-#_51365aaaa4fb8be05de624c4b74063fa | p@chr1:193186195..193186210, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr9:77257424..77257435,-#_51365aaaa4fb8be05de624c4b74063fa | p@chr9:77257424..77257435, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:161970049..161970057,-#_51365aaaa4fb8be05de624c4b74063fa | p3@GU361471 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:70464593..70464598,+#_51365aaaa4fb8be05de624c4b74063fa | p@chr12:70464593..70464598, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:59982412..59982425,+#_51365aaaa4fb8be05de624c4b74063fa | p@chr4:59982412..59982425, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:154858237..154858245,-#_51365aaaa4fb8be05de624c4b74063fa | p@chr6:154858237..154858245, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:59982412..59982425,+#_51365aaaa4fb8be05de624c4b74063fa | p@chr4:59982412..59982425, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr18:56813724..56813731,+#_51365aaaa4fb8be05de624c4b74063fa | p@chr18:56813724..56813731, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:193186195..193186210,-#_51365aaaa4fb8be05de624c4b74063fa | p@chr1:193186195..193186210, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr18:56813724..56813731,+#_51365aaaa4fb8be05de624c4b74063fa | p@chr18:56813724..56813731, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:139208173..139208199,-#_51365aaaa4fb8be05de624c4b74063fa | p@chr4:139208173..139208199, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:193232096..193232117,+#_51365aaaa4fb8be05de624c4b74063fa | p@chr1:193232096..193232117, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:70464675..70464680,+#_51365aaaa4fb8be05de624c4b74063fa | p@chr12:70464675..70464680, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:139208173..139208199,-#_51365aaaa4fb8be05de624c4b74063fa | p@chr4:139208173..139208199, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr18:7955271..7955280,+#_51365aaaa4fb8be05de624c4b74063fa | p@chr18:7955271..7955280, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr18:7955271..7955280,+#_51365aaaa4fb8be05de624c4b74063fa | p@chr18:7955271..7955280, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr18:56816249..56816258,+#_d40babbb820b323bde57e95a9601d846 | p@chr18:56816249..56816258, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr18:56816249..56816258,+#_d40babbb820b323bde57e95a9601d846 | p@chr18:56816249..56816258, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:154858334..154858342,-#_d40babbb820b323bde57e95a9601d846 | p@chr6:154858334..154858342, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr13:93508642..93508652,-#_d40babbb820b323bde57e95a9601d846 | p@chr13:93508642..93508652, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:132980338..132980346,-#_d40babbb820b323bde57e95a9601d846 | p@chr6:132980338..132980346, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:154858334..154858342,-#_d40babbb820b323bde57e95a9601d846 | p@chr6:154858334..154858342, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr1:110661599..110661609,-#_d40babbb820b323bde57e95a9601d846 | p@chr1:110661599..110661609, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr13:93508642..93508652,-#_d40babbb820b323bde57e95a9601d846 | p@chr13:93508642..93508652, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:132980338..132980346,-#_d40babbb820b323bde57e95a9601d846 | p@chr6:132980338..132980346, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr1:110661599..110661609,-#_d40babbb820b323bde57e95a9601d846 | p@chr1:110661599..110661609, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr18:56815158..56815162,+#_1175aab72cb275f0fb377ed79f272db4 | p@chr18:56815158..56815162, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr18:56815158..56815162,+#_1175aab72cb275f0fb377ed79f272db4 | p@chr18:56815158..56815162, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:128108552..128108561,+#_1175aab72cb275f0fb377ed79f272db4 | p1@ENST00000537470 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr1:110678110..110678115,+#_1175aab72cb275f0fb377ed79f272db4 | p@chr1:110678110..110678115, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:127385138..127385144,-#_1175aab72cb275f0fb377ed79f272db4 | p@chr12:127385138..127385144, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr18:7955176..7955183,+#_1175aab72cb275f0fb377ed79f272db4 | p@chr18:7955176..7955183, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr18:7955176..7955183,+#_1175aab72cb275f0fb377ed79f272db4 | p@chr18:7955176..7955183, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:70464652..70464662,+#_1175aab72cb275f0fb377ed79f272db4 | p@chr12:70464652..70464662, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:128108552..128108561,+#_1175aab72cb275f0fb377ed79f272db4 | p1@ENST00000537470 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr1:110678228..110678236,+#_1175aab72cb275f0fb377ed79f272db4 | p@chr1:110678228..110678236, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:127385138..127385144,-#_1175aab72cb275f0fb377ed79f272db4 | p@chr12:127385138..127385144, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr1:110678228..110678236,+#_1175aab72cb275f0fb377ed79f272db4 | p@chr1:110678228..110678236, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:70464652..70464662,+#_1175aab72cb275f0fb377ed79f272db4 | p@chr12:70464652..70464662, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr19:7570269..7570273,+#_1175aab72cb275f0fb377ed79f272db4 | p13@C19orf45 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr9:77257683..77257703,+#_1175aab72cb275f0fb377ed79f272db4 | p@chr9:77257683..77257703, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr19:7570269..7570273,+#_1175aab72cb275f0fb377ed79f272db4 | p13@C19orf45 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr1:110678110..110678115,+#_1175aab72cb275f0fb377ed79f272db4 | p@chr1:110678110..110678115, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr9:77257683..77257703,+#_1175aab72cb275f0fb377ed79f272db4 | p@chr9:77257683..77257703, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr13:93587956..93587973,+#_11633d67b0962510b2009276ce84e1b1 | p@chr13:93587956..93587973, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr15:92459318..92459327,+#_11633d67b0962510b2009276ce84e1b1 | p@chr15:92459318..92459327, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:120381641..120381650,+#_11633d67b0962510b2009276ce84e1b1 | p@chr7:120381641..120381650, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr12:128077388..128077416,+#_11633d67b0962510b2009276ce84e1b1 | p@chr12:128077388..128077416, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr18:56816267..56816276,+#_11633d67b0962510b2009276ce84e1b1 | p@chr18:56816267..56816276, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr18:56816267..56816276,+#_11633d67b0962510b2009276ce84e1b1 | p@chr18:56816267..56816276, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:159855059..159855068,-#_11633d67b0962510b2009276ce84e1b1 | p@chr2:159855059..159855068, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:3310694..3310716,-#_11633d67b0962510b2009276ce84e1b1 | p@chr4:3310694..3310716, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:77683792..77683799,+#_11633d67b0962510b2009276ce84e1b1 | p@chr5:77683792..77683799, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:104246731..104246738,-#_11633d67b0962510b2009276ce84e1b1 | p3@ENST00000524336 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:159855059..159855068,-#_11633d67b0962510b2009276ce84e1b1 | p@chr2:159855059..159855068, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:165198157..165198181,-#_11633d67b0962510b2009276ce84e1b1 | p@chr1:165198157..165198181, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:3310694..3310716,-#_11633d67b0962510b2009276ce84e1b1 | p@chr4:3310694..3310716, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:77683792..77683799,+#_11633d67b0962510b2009276ce84e1b1 | p@chr5:77683792..77683799, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:120381641..120381650,+#_11633d67b0962510b2009276ce84e1b1 | p@chr7:120381641..120381650, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:104246731..104246738,-#_11633d67b0962510b2009276ce84e1b1 | p3@ENST00000524336 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr13:93587956..93587973,+#_11633d67b0962510b2009276ce84e1b1 | p@chr13:93587956..93587973, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr15:92459318..92459327,+#_11633d67b0962510b2009276ce84e1b1 | p@chr15:92459318..92459327, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:165198157..165198181,-#_11633d67b0962510b2009276ce84e1b1 | p@chr1:165198157..165198181, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr12:128077388..128077416,+#_11633d67b0962510b2009276ce84e1b1 | p@chr12:128077388..128077416, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr19:51412411..51412426,-#_639c55032daf5776df3081c22d855f24 | p4@KLK4 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr20:11077086..11077098,+#_639c55032daf5776df3081c22d855f24 | p@chr20:11077086..11077098, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr14:101165430..101165451,-#_639c55032daf5776df3081c22d855f24 | p@chr14:101165430..101165451, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr7:100807523..100807543,+#_639c55032daf5776df3081c22d855f24 | p@chr7:100807523..100807543, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr7:120778453..120778458,-#_639c55032daf5776df3081c22d855f24 | p@chr7:120778453..120778458, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr7:100808087..100808104,-#_639c55032daf5776df3081c22d855f24 | p@chr7:100808087..100808104, - |
