CL:0000173: Difference between revisions

Latest revision as of 16:31, 12 September 2014

pancreatic D cell

Namespace:

FANTOM

Definition:

"A D cell located in the pancreas. Peripherally placed within the islets like type A cells; contains somatostatin." [FMA:0517223651, GOC:tfm]

Xrefs:

links:

BTO:0000803

FMA:70587

Synonyms:

"D-cell of pancreatic islet" EXACT []
"delta cell of islet" EXACT []
"delta cell of pancreatic islet" EXACT []
"pancreatic D-cell" EXACT []
"pancreatic delta cell" EXACT []
"somatostatin-secreting pancreatic cell" EXACT []

Ontology association Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies. link to ontology dataset data

Parents

is_a:	CL:0000083(epithelial cell of pancreas),CL:0000502(type D enteroendocrine cell)
develops_from:	CL:0002351(progenitor cell of endocrine pancreas)
part_of:	UBERON:0001264(pancreas),UBERON:0000006(islet of Langerhans),UBERON:0001264(pancreas)

Children

is a:	FF:10781-110G7 (somatostatinoma cell line:QGP-1)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

10781-110G7 (somatostatinoma cell line:QGP-1)

Mouse (Mus musculus)

10781-110G7 (somatostatinoma cell line:QGP-1)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000173 (pancreatic D cell), sorted by p-values Analyst: Hideya Kawaji link to source dataset human : data mouse : data

Search:

P-value	FFCP	Short description
5.42e-195	FFCP PHASE2:Hg19::chr9:96678236..96678246,-	p@chr9:96678236..96678246, -
5.42e-195	FFCP PHASE2:Hg19::chr20:20173664..20173680,+	p@chr20:20173664..20173680, +
5.42e-195	FFCP PHASE1:Hg19::chr6:50692244..50692251,+	p@chr6:50692244..50692251, +
5.42e-195	FFCP PHASE2:Hg19::chr9:77257468..77257474,-	p@chr9:77257468..77257474, -
5.42e-195	FFCP PHASE1:Hg19::chr1:193232144..193232147,+	p@chr1:193232144..193232147, +
5.42e-195	FFCP PHASE1:Hg19::chr20:20173664..20173680,+	p@chr20:20173664..20173680, +
5.42e-195	FFCP PHASE1:Hg19::chr9:96678236..96678246,-	p@chr9:96678236..96678246, -
5.42e-195	FFCP PHASE1:Hg19::chr1:193186161..193186169,-	p@chr1:193186161..193186169, -
5.42e-195	FFCP PHASE1:Hg19::chr12:70464665..70464668,+	p@chr12:70464665..70464668, +
5.42e-195	FFCP PHASE2:Hg19::chr1:193232079..193232084,+	p@chr1:193232079..193232084, +
5.42e-195	FFCP PHASE1:Hg19::chr9:77257468..77257474,-	p@chr9:77257468..77257474, -
5.42e-195	FFCP PHASE2:Hg19::chr12:70464665..70464668,+	p@chr12:70464665..70464668, +
5.42e-195	FFCP PHASE2:Hg19::chr18:56815879..56815901,+	p@chr18:56815879..56815901, +
5.42e-195	FFCP PHASE1:Hg19::chr18:56815879..56815901,+	p@chr18:56815879..56815901, +
5.42e-195	FFCP PHASE1:Hg19::chr1:193232079..193232084,+	p@chr1:193232079..193232084, +
5.42e-195	FFCP PHASE2:Hg19::chr6:50692244..50692251,+	p@chr6:50692244..50692251, +
5.42e-195	FFCP PHASE2:Hg19::chr1:193232144..193232147,+	p@chr1:193232144..193232147, +
5.42e-195	FFCP PHASE2:Hg19::chr10:120200137..120200154,+	p@chr10:120200137..120200154, +
5.42e-195	FFCP PHASE1:Hg19::chr10:120200137..120200154,+	p@chr10:120200137..120200154, +
5.42e-195	FFCP PHASE2:Hg19::chr1:193186161..193186169,-	p@chr1:193186161..193186169, -
9.37e-99	FFCP PHASE2:Hg19::chr6:161970049..161970057,-	p3@GU361471
9.37e-99	FFCP PHASE1:Hg19::chr1:193232096..193232117,+	p@chr1:193232096..193232117, +
9.37e-99	FFCP PHASE2:Hg19::chr12:70464593..70464598,+	p@chr12:70464593..70464598, +
9.37e-99	FFCP PHASE1:Hg19::chr6:154858221..154858224,-	p@chr6:154858221..154858224, -
9.37e-99	FFCP PHASE1:Hg19::chr4:173014804..173014812,+	p@chr4:173014804..173014812, +
9.37e-99	FFCP PHASE2:Hg19::chr6:154858237..154858245,-	p@chr6:154858237..154858245, -
9.37e-99	FFCP PHASE2:Hg19::chr1:193186195..193186210,-	p@chr1:193186195..193186210, -
9.37e-99	FFCP PHASE1:Hg19::chr9:77257424..77257435,-	p@chr9:77257424..77257435, -
9.37e-99	FFCP PHASE1:Hg19::chr6:161970049..161970057,-	p3@GU361471
9.37e-99	FFCP PHASE2:Hg19::chr4:59982412..59982425,+	p@chr4:59982412..59982425, +
9.37e-99	FFCP PHASE1:Hg19::chr6:154858237..154858245,-	p@chr6:154858237..154858245, -
9.37e-99	FFCP PHASE1:Hg19::chr4:59982412..59982425,+	p@chr4:59982412..59982425, +
9.37e-99	FFCP PHASE2:Hg19::chr18:56813724..56813731,+	p@chr18:56813724..56813731, +
9.37e-99	FFCP PHASE1:Hg19::chr1:193186195..193186210,-	p@chr1:193186195..193186210, -
9.37e-99	FFCP PHASE1:Hg19::chr18:56813724..56813731,+	p@chr18:56813724..56813731, +
9.37e-99	FFCP PHASE1:Hg19::chr12:70464675..70464680,+	p@chr12:70464675..70464680, +
9.37e-99	FFCP PHASE2:Hg19::chr4:139208173..139208199,-	p@chr4:139208173..139208199, -
9.37e-99	FFCP PHASE2:Hg19::chr1:193232096..193232117,+	p@chr1:193232096..193232117, +
9.37e-99	FFCP PHASE2:Hg19::chr12:70464675..70464680,+	p@chr12:70464675..70464680, +
9.37e-99	FFCP PHASE1:Hg19::chr4:139208173..139208199,-	p@chr4:139208173..139208199, -
9.37e-99	FFCP PHASE2:Hg19::chr18:7955271..7955280,+	p@chr18:7955271..7955280, +
9.37e-99	FFCP PHASE1:Hg19::chr18:7955271..7955280,+	p@chr18:7955271..7955280, +
9.37e-99	FFCP PHASE2:Hg19::chr6:154858221..154858224,-	p@chr6:154858221..154858224, -
9.37e-99	FFCP PHASE2:Hg19::chr4:173014804..173014812,+	p@chr4:173014804..173014812, +
9.37e-99	FFCP PHASE1:Hg19::chr12:70464593..70464598,+	p@chr12:70464593..70464598, +
9.37e-99	FFCP PHASE2:Hg19::chr9:77257424..77257435,-	p@chr9:77257424..77257435, -
2.55e-98	FFCP PHASE1:Hg19::chr13:93508642..93508652,-	p@chr13:93508642..93508652, -
2.55e-98	FFCP PHASE2:Hg19::chr6:154858334..154858342,-	p@chr6:154858334..154858342, -
2.55e-98	FFCP PHASE2:Hg19::chr13:93508642..93508652,-	p@chr13:93508642..93508652, -
2.55e-98	FFCP PHASE2:Hg19::chr6:132980338..132980346,-	p@chr6:132980338..132980346, -
2.55e-98	FFCP PHASE1:Hg19::chr6:154858334..154858342,-	p@chr6:154858334..154858342, -
2.55e-98	FFCP PHASE2:Hg19::chr1:110661599..110661609,-	p@chr1:110661599..110661609, -
2.55e-98	FFCP PHASE1:Hg19::chr6:132980338..132980346,-	p@chr6:132980338..132980346, -
2.55e-98	FFCP PHASE1:Hg19::chr1:110661599..110661609,-	p@chr1:110661599..110661609, -
2.55e-98	FFCP PHASE2:Hg19::chr18:56816249..56816258,+	p@chr18:56816249..56816258, +
2.55e-98	FFCP PHASE1:Hg19::chr18:56816249..56816258,+	p@chr18:56816249..56816258, +
1.23e-66	FFCP PHASE2:Hg19::chr18:56815158..56815162,+	p@chr18:56815158..56815162, +
1.23e-66	FFCP PHASE1:Hg19::chr18:56815158..56815162,+	p@chr18:56815158..56815162, +
1.23e-66	FFCP PHASE2:Hg19::chr12:128108552..128108561,+	p1@ENST00000537470
1.23e-66	FFCP PHASE1:Hg19::chr12:127385138..127385144,-	p@chr12:127385138..127385144, -
1.23e-66	FFCP PHASE1:Hg19::chr1:110678110..110678115,+	p@chr1:110678110..110678115, +
1.23e-66	FFCP PHASE1:Hg19::chr12:70464652..70464662,+	p@chr12:70464652..70464662, +
1.23e-66	FFCP PHASE2:Hg19::chr12:127385138..127385144,-	p@chr12:127385138..127385144, -
1.23e-66	FFCP PHASE2:Hg19::chr18:7955176..7955183,+	p@chr18:7955176..7955183, +
1.23e-66	FFCP PHASE1:Hg19::chr18:7955176..7955183,+	p@chr18:7955176..7955183, +
1.23e-66	FFCP PHASE2:Hg19::chr12:70464652..70464662,+	p@chr12:70464652..70464662, +
1.23e-66	FFCP PHASE2:Hg19::chr1:110678228..110678236,+	p@chr1:110678228..110678236, +
1.23e-66	FFCP PHASE1:Hg19::chr1:110678228..110678236,+	p@chr1:110678228..110678236, +
1.23e-66	FFCP PHASE2:Hg19::chr19:7570269..7570273,+	p13@C19orf45
1.23e-66	FFCP PHASE2:Hg19::chr9:77257683..77257703,+	p@chr9:77257683..77257703, +
1.23e-66	FFCP PHASE1:Hg19::chr19:7570269..7570273,+	p13@C19orf45
1.23e-66	FFCP PHASE2:Hg19::chr1:110678110..110678115,+	p@chr1:110678110..110678115, +
1.23e-66	FFCP PHASE1:Hg19::chr9:77257683..77257703,+	p@chr9:77257683..77257703, +
1.23e-66	FFCP PHASE1:Hg19::chr12:128108552..128108561,+	p1@ENST00000537470
2.39e-66	FFCP PHASE2:Hg19::chr18:56816267..56816276,+	p@chr18:56816267..56816276, +
2.39e-66	FFCP PHASE1:Hg19::chr18:56816267..56816276,+	p@chr18:56816267..56816276, +
2.39e-66	FFCP PHASE2:Hg19::chr2:159855059..159855068,-	p@chr2:159855059..159855068, -
2.39e-66	FFCP PHASE2:Hg19::chr4:3310694..3310716,-	p@chr4:3310694..3310716, -
2.39e-66	FFCP PHASE2:Hg19::chr5:77683792..77683799,+	p@chr5:77683792..77683799, +
2.39e-66	FFCP PHASE2:Hg19::chr5:104246731..104246738,-	p3@ENST00000524336
2.39e-66	FFCP PHASE1:Hg19::chr2:159855059..159855068,-	p@chr2:159855059..159855068, -
2.39e-66	FFCP PHASE1:Hg19::chr4:3310694..3310716,-	p@chr4:3310694..3310716, -
2.39e-66	FFCP PHASE2:Hg19::chr1:165198157..165198181,-	p@chr1:165198157..165198181, -
2.39e-66	FFCP PHASE1:Hg19::chr13:93587956..93587973,+	p@chr13:93587956..93587973, +
2.39e-66	FFCP PHASE1:Hg19::chr5:77683792..77683799,+	p@chr5:77683792..77683799, +
2.39e-66	FFCP PHASE2:Hg19::chr7:120381641..120381650,+	p@chr7:120381641..120381650, +
2.39e-66	FFCP PHASE1:Hg19::chr5:104246731..104246738,-	p3@ENST00000524336
2.39e-66	FFCP PHASE2:Hg19::chr13:93587956..93587973,+	p@chr13:93587956..93587973, +
2.39e-66	FFCP PHASE1:Hg19::chr12:128077388..128077416,+	p@chr12:128077388..128077416, +
2.39e-66	FFCP PHASE2:Hg19::chr15:92459318..92459327,+	p@chr15:92459318..92459327, +
2.39e-66	FFCP PHASE1:Hg19::chr1:165198157..165198181,-	p@chr1:165198157..165198181, -
2.39e-66	FFCP PHASE2:Hg19::chr12:128077388..128077416,+	p@chr12:128077388..128077416, +
2.39e-66	FFCP PHASE1:Hg19::chr7:120381641..120381650,+	p@chr7:120381641..120381650, +
2.39e-66	FFCP PHASE1:Hg19::chr15:92459318..92459327,+	p@chr15:92459318..92459327, +
4.66e-66	FFCP PHASE1:Hg19::chr14:101165430..101165451,-	p@chr14:101165430..101165451, -
4.66e-66	FFCP PHASE1:Hg19::chr20:11077086..11077098,+	p@chr20:11077086..11077098, +
4.66e-66	FFCP PHASE2:Hg19::chr14:101165430..101165451,-	p@chr14:101165430..101165451, -
4.66e-66	FFCP PHASE1:Hg19::chr7:100807523..100807543,+	p@chr7:100807523..100807543, +
4.66e-66	FFCP PHASE2:Hg19::chr7:120778453..120778458,-	p@chr7:120778453..120778458, -
4.66e-66	FFCP PHASE2:Hg19::chr7:100808087..100808104,-	p@chr7:100808087..100808104, -

Showing 1 to 100 of 100 entries

@@ Line 1: / Line 1: @@
 {{CL
-|id=CL:0000173
+|alt_id=
-|name=pancreatic D cell
-|namespace=cell
-|def="A D cell located in the pancreas. Peripherally placed within the islets like type A cells; contains somatostatin." [FMA:0517223651, GOC:tfm]
-|xref=BTO:0000803;;FMA:70587
-|is_a=CL:0000502
-|synonym="D-cell of pancreatic islet" EXACT [];;"delta cell of islet" EXACT [];;"delta cell of pancreatic islet" EXACT [];;"pancreatic D-cell" EXACT [];;"pancreatic delta cell" EXACT [];;"somatostatin-secreting pancreatic cell" EXACT []
 |comment=
-|alt_id=
-|disjoint_from=
-|union_of=
 |created_by=
-|obo_creation_date=
+|def="A D cell located in the pancreas. Peripherally placed within the islets like type A cells; contains somatostatin." [FMA:0517223651, GOC:tfm]
-|subset=
 |derives_from=
-|develops_from=
+|develops_from=CL:0002351
+|disjoint_from=
 |has_quality=
+|id=CL:0000173
+|is_a=CL:0000083 ;;CL:0000502
+|is_obsolete=
 |located_in=
-|part_of=
+|name=pancreatic D cell
+|namespace=FANTOM
+|obo_creation_date=
+|part_of=UBERON:0001264;;UBERON:0000006;;UBERON:0001264
+|preceded_by=
 |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
-|is_obsolete=
+|subset=
-|preceded_by=
+|synonym="D-cell of pancreatic islet" EXACT [];;"delta cell of islet" EXACT [];;"delta cell of pancreatic islet" EXACT [];;"pancreatic D-cell" EXACT [];;"pancreatic delta cell" EXACT [];;"somatostatin-secreting pancreatic cell" EXACT []
+|union_of=
+|xref=BTO:0000803;;FMA:70587
 }}

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CL:0000173: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 16:31, 12 September 2014

Ontology Tree: Loaded from BioPortal

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