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{{CL
{{CL
|id=CL:0000622
|alt_id=
|name=acinar cell
|namespace=cell;;efo
|def="A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus)." [GOC:tfm, http://www.copewithcytokines.de]
|xref=FMA:83625
|is_a=CL:0000150;;CL:0000154;;EFO:0002966
|synonym="acinic cell" EXACT [];;"acinous cell" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus)." [GOC:tfm, http://www.copewithcytokines.de]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000622
|is_a=CL:0000150 ;;CL:0000154
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=acinar cell
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0009842
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="acinic cell" EXACT [];;"acinous cell" EXACT []
|union_of=
|xref=FMA:83625
}}
}}

Latest revision as of 16:35, 12 September 2014

Name:acinar cell
Namespace:FANTOM
Definition:"A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus)." [GOC:tfm, http://www.copewithcytokines.de]
Xrefs:
links:
FMA:83625
Synonyms: "acinic cell" EXACT []
"acinous cell" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000150(glandular epithelial cell),CL:0000154(protein secreting cell)
part_of:UBERON:0009842(acinus)



Children


is a:CL:0002140 (acinar cell of sebaceous gland),CL:0002623 (acinar cell of salivary gland)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000622 (acinar cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data