CL:0000622: Difference between revisions
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|located_in= | |located_in= | ||
|name=acinar cell | |name=acinar cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0009842 | |part_of=UBERON:0009842 |
Latest revision as of 16:35, 12 September 2014
Name: | acinar cell | |
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Namespace: | FANTOM | |
Definition: | "A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus)." [GOC:tfm, http://www.copewithcytokines.de] | |
Xrefs: |
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Synonyms: |
"acinic cell" EXACT [] "acinous cell" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000150(glandular epithelial cell),CL:0000154(protein secreting cell) |
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part_of: | UBERON:0009842(acinus) |
Children
is a: | CL:0002140 (acinar cell of sebaceous gland),CL:0002623 (acinar cell of salivary gland) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11220-116B5 (Sebocyte, donor1)
- 11301-117B5 (Sebocyte, donor2)
- 11378-118B1 (Sebocyte, donor3)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
Mouse (Mus musculus)
- 11220-116B5 (Sebocyte, donor1)
- 11301-117B5 (Sebocyte, donor2)
- 11378-118B1 (Sebocyte, donor3)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000622 (acinar cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data