CL:0002222: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002222
|name=vertebrate lens cell
|namespace=cell
|def="A cell comprising the transparent, biconvex body separating the posterior chamber and vitreous body, a...") |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by=tmeehan | |created_by=tmeehan | ||
| | |def="A cell comprising the transparent, biconvex body separating the posterior chamber and vitreous body, and constituting part of the refracting mechanism of the mammalian eye." [GOC:tfm, ISBN:0721662544] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0002222 | |||
|is_a=CL:0000066 ;;CL:0000306 ;;CL:0002371 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=vertebrate lens cell | ||
|namespace=FANTOM | |||
|obo_creation_date=2010-09-07T10:38:03Z | |||
|part_of=UBERON:0000965 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
|subset= | |||
|synonym= | |||
|union_of= | |||
|xref=FMA:70950 | |||
}} | }} |
Latest revision as of 16:41, 12 September 2014
Name: | vertebrate lens cell | |
---|---|---|
Namespace: | FANTOM | |
Definition: | "A cell comprising the transparent, biconvex body separating the posterior chamber and vitreous body, and constituting part of the refracting mechanism of the mammalian eye." [GOC:tfm, ISBN:0721662544] | |
Xrefs: |
| |
Created by: | tmeehan | |
Creation date: | 2010-09-07T10:38:03Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000066(epithelial cell),CL:0000306(crystallin accumulating cell),CL:0002371(somatic cell) |
---|---|
part_of: | UBERON:0000965(lens of camera-type eye) |
Children
is a: | CL:0002224 (lens epithelial cell) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10647-109A8 (lens epithelial cell line:SRA 01/04)
- 11529-119I8 (Lens Epithelial Cells, donor1)
- 11609-120I7 (Lens Epithelial Cells, donor2)
- 11690-122I7 (Lens Epithelial Cells, donor3)
Mouse (Mus musculus)
- 10647-109A8 (lens epithelial cell line:SRA 01/04)
- 11529-119I8 (Lens Epithelial Cells, donor1)
- 11609-120I7 (Lens Epithelial Cells, donor2)
- 11690-122I7 (Lens Epithelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002222 (vertebrate lens cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data