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{{CL
{{CL
|id=CL:0002262
|alt_id=CL:1000403
|name=endothelial cell of sinusoid
|namespace=cell
|def="An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver." [GOC:tfm, ISBN:0618947256]
|xref=FMA:63134
|is_a=CL:0000115
|synonym=
|comment=
|comment=
|alt_id=CL:1000403
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-09-14T10:57:26Z
|def="An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver." [GOC:tfm, ISBN:0618947256]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002262
|is_a=CL:0000115
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=endothelial cell of sinusoid
|namespace=FANTOM
|obo_creation_date=2010-09-14T10:57:26Z
|part_of=UBERON:0003909
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FMA:63134
}}
}}

Latest revision as of 16:41, 12 September 2014

Name:endothelial cell of sinusoid
Namespace:FANTOM
Definition:"An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver." [GOC:tfm, ISBN:0618947256]
Xrefs:
links:
FMA:63134
Alt_id: CL:1000403
Created by:tmeehan
Creation date:2010-09-14T10:57:26Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000115(endothelial cell)
part_of:UBERON:0003909(sinusoid)



Children


is a:CL:1000398 (endothelial cell of hepatic sinusoid)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002262 (endothelial cell of sinusoid), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data