CL:0002262: Difference between revisions
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|located_in= | |located_in= | ||
|name=endothelial cell of sinusoid | |name=endothelial cell of sinusoid | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2010-09-14T10:57:26Z | |obo_creation_date=2010-09-14T10:57:26Z | ||
|part_of=UBERON:0003909 | |part_of=UBERON:0003909 |
Latest revision as of 16:41, 12 September 2014
Name: | endothelial cell of sinusoid | |
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Namespace: | FANTOM | |
Definition: | "An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver." [GOC:tfm, ISBN:0618947256] | |
Xrefs: |
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Alt_id: | CL:1000403 | |
Created by: | tmeehan | |
Creation date: | 2010-09-14T10:57:26Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000115(endothelial cell) |
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part_of: | UBERON:0003909(sinusoid) |
Children
is a: | CL:1000398 (endothelial cell of hepatic sinusoid) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
- 11831-124G4
- 11832-124G5
Mouse (Mus musculus)
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
- 11831-124G4
- 11832-124G5
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002262 (endothelial cell of sinusoid), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data