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{{CL
{{CL
|id=CL:0002315
|alt_id=
|name=supporting cell of cochlea
|namespace=cell
|def="An epithelial supporting cell located in the cochlea." [GOC:tfm]
|xref=FMA:79796
|is_a=CL:0005014
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-09-14T03:31:38Z
|def="An epithelial supporting cell located in the cochlea." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002315
|is_a=CL:0001035 ;;CL:0005014
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=supporting cell of cochlea
|namespace=FANTOM
|obo_creation_date=2010-09-14T03:31:38Z
|part_of=UBERON:0001844
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FMA:79796
}}
}}

Latest revision as of 16:41, 12 September 2014

Name:supporting cell of cochlea
Namespace:FANTOM
Definition:"An epithelial supporting cell located in the cochlea." [GOC:tfm]
Xrefs:
links:
FMA:79796
Created by:tmeehan
Creation date:2010-09-14T03:31:38Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0001035(bone cell),CL:0005014(auditory epithelial support cell)
part_of:UBERON:0001844(cochlea)



Children


is a:CL:0002490 (organ of Corti supporting cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002315 (supporting cell of cochlea), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr5:92800684..92800687,+#_ec94920240101bcf65e2087280a0f29cp@chr5:92800684..92800687, +
3.07e-86FFCP PHASE2:Mm9::chr5:92800735..92800736,+#_ec94920240101bcf65e2087280a0f29cp@chr5:92800735..92800736, +
3.07e-86FFCP PHASE2:Mm9::chr2:163517841..163517844,-#_ec94920240101bcf65e2087280a0f29cp1@ENSMUST00000154065
3.07e-86FFCP PHASE2:Mm9::chr17:34752992..34753001,-#_ec94920240101bcf65e2087280a0f29cp5@Egfl8
3.07e-86FFCP PHASE1:Mm9::chr10:97109619..97109632,+#_ec94920240101bcf65e2087280a0f29cp5@Epyc
3.07e-86FFCP PHASE2:Mm9::chr10:97109619..97109632,+#_ec94920240101bcf65e2087280a0f29cp5@Epyc
3.07e-86FFCP PHASE1:Mm9::chr10:67372807..67372809,+#_ec94920240101bcf65e2087280a0f29cp@chr10:67372807..67372809, +
3.07e-86FFCP PHASE1:Mm9::chr15:94418515..94418518,-#_ec94920240101bcf65e2087280a0f29cp@chr15:94418515..94418518, -
3.07e-86FFCP PHASE2:Mm9::chr14:102298599..102298602,+#_ec94920240101bcf65e2087280a0f29cp@chr14:102298599..102298602, +
3.07e-86FFCP PHASE2:Mm9::chr14:102291551..102291553,-#_ec94920240101bcf65e2087280a0f29cp@chr14:102291551..102291553, -
3.07e-86FFCP PHASE2:Mm9::chr14:62578740..62578749,+#_ec94920240101bcf65e2087280a0f29cp@chr14:62578740..62578749, +
3.07e-86FFCP PHASE2:Mm9::chr14:119912363..119912365,+#_ec94920240101bcf65e2087280a0f29cp@chr14:119912363..119912365, +
3.07e-86FFCP PHASE2:Mm9::chr4:151450310..151450318,+#_ec94920240101bcf65e2087280a0f29cp@chr4:151450310..151450318, +
3.07e-86FFCP PHASE2:Mm9::chr14:48406009..48406013,+#_ec94920240101bcf65e2087280a0f29cp@chr14:48406009..48406013, +
3.07e-86FFCP PHASE2:Mm9::chr10:24310748..24310749,+#_ec94920240101bcf65e2087280a0f29cp@chr10:24310748..24310749, +
3.07e-86FFCP PHASE1:Mm9::chr5:92800735..92800736,+#_ec94920240101bcf65e2087280a0f29cp@chr5:92800735..92800736, +
3.07e-86FFCP PHASE2:Mm9::chr9:42139059..42139081,-#_ec94920240101bcf65e2087280a0f29cp@chr9:42139059..42139081, -
3.07e-86FFCP PHASE1:Mm9::chr19:23001562..23001563,+#_ec94920240101bcf65e2087280a0f29cp@chr19:23001562..23001563, +
3.07e-86FFCP PHASE2:Mm9::chr7:59135658..59135665,+#_ec94920240101bcf65e2087280a0f29cp22@Gas2
3.07e-86FFCP PHASE1:Mm9::chr14:102291443..102291451,-#_ec94920240101bcf65e2087280a0f29cp@chr14:102291443..102291451, -
3.07e-86FFCP PHASE2:Mm9::chr15:94418486..94418491,-#_ec94920240101bcf65e2087280a0f29cp@chr15:94418486..94418491, -
3.07e-86FFCP PHASE2:Mm9::chr11:119881548..119881551,-#_ec94920240101bcf65e2087280a0f29cp19@Aatk
3.07e-86FFCP PHASE2:Mm9::chr5:113939859..113939865,+#_ec94920240101bcf65e2087280a0f29cp@chr5:113939859..113939865, +
3.07e-86FFCP PHASE1:Mm9::chr17:34752992..34753001,-#_ec94920240101bcf65e2087280a0f29cp5@Egfl8
3.07e-86FFCP PHASE1:Mm9::chr14:48406009..48406013,+#_ec94920240101bcf65e2087280a0f29cp@chr14:48406009..48406013, +
3.07e-86FFCP PHASE1:Mm9::chr6:30619458..30619461,-#_ec94920240101bcf65e2087280a0f29cp17@Tsga14
3.07e-86FFCP PHASE1:Mm9::chr9:77109269..77109270,-#_ec94920240101bcf65e2087280a0f29cp@chr9:77109269..77109270, -
3.07e-86FFCP PHASE1:Mm9::chr15:55289275..55289297,+#_ec94920240101bcf65e2087280a0f29cp@chr15:55289275..55289297, +
3.07e-86FFCP PHASE1:Mm9::chr9:42139059..42139081,-#_ec94920240101bcf65e2087280a0f29cp@chr9:42139059..42139081, -
3.07e-86FFCP PHASE2:Mm9::chr9:77109269..77109270,-#_ec94920240101bcf65e2087280a0f29cp@chr9:77109269..77109270, -
3.07e-86FFCP PHASE2:Mm9::chr4:151450365..151450374,+#_ec94920240101bcf65e2087280a0f29cp@chr4:151450365..151450374, +
3.07e-86FFCP PHASE1:Mm9::chr2:163517841..163517844,-#_ec94920240101bcf65e2087280a0f29cp1@ENSMUST00000154065
3.07e-86FFCP PHASE1:Mm9::chr5:113939859..113939865,+#_ec94920240101bcf65e2087280a0f29cp@chr5:113939859..113939865, +
3.07e-86FFCP PHASE1:Mm9::chr19:55269566..55269577,-#_ec94920240101bcf65e2087280a0f29cp@chr19:55269566..55269577, -
3.07e-86FFCP PHASE2:Mm9::chr10:107349495..107349500,-#_ec94920240101bcf65e2087280a0f29cp6@Otogl
3.07e-86FFCP PHASE2:Mm9::chr9:42147036..42147053,-#_ec94920240101bcf65e2087280a0f29cp@chr9:42147036..42147053, -
3.07e-86FFCP PHASE1:Mm9::chr7:128226917..128226918,+#_ec94920240101bcf65e2087280a0f29cp2@Otoa
3.07e-86FFCP PHASE1:Mm9::chr14:102298599..102298602,+#_ec94920240101bcf65e2087280a0f29cp@chr14:102298599..102298602, +
3.07e-86FFCP PHASE2:Mm9::chr15:55289275..55289297,+#_ec94920240101bcf65e2087280a0f29cp@chr15:55289275..55289297, +
3.07e-86FFCP PHASE2:Mm9::chr19:55269566..55269577,-#_ec94920240101bcf65e2087280a0f29cp@chr19:55269566..55269577, -
3.07e-86FFCP PHASE2:Mm9::chr15:94418515..94418518,-#_ec94920240101bcf65e2087280a0f29cp@chr15:94418515..94418518, -
3.07e-86FFCP PHASE1:Mm9::chr11:119881548..119881551,-#_ec94920240101bcf65e2087280a0f29cp19@Aatk
3.07e-86FFCP PHASE2:Mm9::chr5:113939919..113939925,+#_ec94920240101bcf65e2087280a0f29cp@chr5:113939919..113939925, +
3.07e-86FFCP PHASE1:Mm9::chr6:30620092..30620097,+#_ec94920240101bcf65e2087280a0f29cp@chr6:30620092..30620097, +
3.07e-86FFCP PHASE1:Mm9::chr4:151450310..151450318,+#_ec94920240101bcf65e2087280a0f29cp@chr4:151450310..151450318, +
3.07e-86FFCP PHASE1:Mm9::chr10:24310748..24310749,+#_ec94920240101bcf65e2087280a0f29cp@chr10:24310748..24310749, +
3.07e-86FFCP PHASE1:Mm9::chr14:119912363..119912365,+#_ec94920240101bcf65e2087280a0f29cp@chr14:119912363..119912365, +
3.07e-86FFCP PHASE1:Mm9::chr9:77109306..77109314,-#_ec94920240101bcf65e2087280a0f29cp@chr9:77109306..77109314, -
3.07e-86FFCP PHASE2:Mm9::chr6:30619458..30619461,-#_ec94920240101bcf65e2087280a0f29cp17@Tsga14
3.07e-86FFCP PHASE1:Mm9::chr9:42147036..42147053,-#_ec94920240101bcf65e2087280a0f29cp@chr9:42147036..42147053, -
3.07e-86FFCP PHASE2:Mm9::chr9:77109306..77109314,-#_ec94920240101bcf65e2087280a0f29cp@chr9:77109306..77109314, -
3.07e-86FFCP PHASE1:Mm9::chr5:113939919..113939925,+#_ec94920240101bcf65e2087280a0f29cp@chr5:113939919..113939925, +
3.07e-86FFCP PHASE1:Mm9::chr19:55270369..55270394,+#_ec94920240101bcf65e2087280a0f29cp@chr19:55270369..55270394, +
3.07e-86FFCP PHASE2:Mm9::chr9:42207838..42207847,-#_ec94920240101bcf65e2087280a0f29cp14@Tecta
3.07e-86FFCP PHASE1:Mm9::chr6:30619311..30619322,-#_ec94920240101bcf65e2087280a0f29cp16@Tsga14
3.07e-86FFCP PHASE2:Mm9::chr9:42202683..42202684,-#_ec94920240101bcf65e2087280a0f29cp@chr9:42202683..42202684, -
3.07e-86FFCP PHASE1:Mm9::chr10:97112452..97112459,+#_ec94920240101bcf65e2087280a0f29cp@chr10:97112452..97112459, +
3.07e-86FFCP PHASE2:Mm9::chr10:97112452..97112459,+#_ec94920240101bcf65e2087280a0f29cp@chr10:97112452..97112459, +
3.07e-86FFCP PHASE2:Mm9::chr14:102291443..102291451,-#_ec94920240101bcf65e2087280a0f29cp@chr14:102291443..102291451, -
3.07e-86FFCP PHASE1:Mm9::chr14:102291551..102291553,-#_ec94920240101bcf65e2087280a0f29cp@chr14:102291551..102291553, -
3.07e-86FFCP PHASE2:Mm9::chr19:55270369..55270394,+#_ec94920240101bcf65e2087280a0f29cp@chr19:55270369..55270394, +
3.07e-86FFCP PHASE2:Mm9::chr7:128226917..128226918,+#_ec94920240101bcf65e2087280a0f29cp2@Otoa
3.07e-86FFCP PHASE1:Mm9::chr4:151450365..151450374,+#_ec94920240101bcf65e2087280a0f29cp@chr4:151450365..151450374, +
3.07e-86FFCP PHASE2:Mm9::chr5:92800684..92800687,+#_ec94920240101bcf65e2087280a0f29cp@chr5:92800684..92800687, +
3.07e-86FFCP PHASE1:Mm9::chr9:42207838..42207847,-#_ec94920240101bcf65e2087280a0f29cp14@Tecta
3.07e-86FFCP PHASE1:Mm9::chr10:107349495..107349500,-#_ec94920240101bcf65e2087280a0f29cp6@Otogl
3.07e-86FFCP PHASE2:Mm9::chr6:30620092..30620097,+#_ec94920240101bcf65e2087280a0f29cp@chr6:30620092..30620097, +
3.07e-86FFCP PHASE1:Mm9::chr9:42202683..42202684,-#_ec94920240101bcf65e2087280a0f29cp@chr9:42202683..42202684, -
3.07e-86FFCP PHASE1:Mm9::chr14:62578740..62578749,+#_ec94920240101bcf65e2087280a0f29cp@chr14:62578740..62578749, +
3.07e-86FFCP PHASE1:Mm9::chr15:94418486..94418491,-#_ec94920240101bcf65e2087280a0f29cp@chr15:94418486..94418491, -
3.07e-86FFCP PHASE2:Mm9::chr19:23001562..23001563,+#_ec94920240101bcf65e2087280a0f29cp@chr19:23001562..23001563, +
3.07e-86FFCP PHASE2:Mm9::chr10:67372807..67372809,+#_ec94920240101bcf65e2087280a0f29cp@chr10:67372807..67372809, +
3.07e-86FFCP PHASE2:Mm9::chr6:30619311..30619322,-#_ec94920240101bcf65e2087280a0f29cp16@Tsga14
3.07e-86FFCP PHASE1:Mm9::chr7:59135658..59135665,+#_ec94920240101bcf65e2087280a0f29cp22@Gas2
2.74e-44FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_1f8d5cee9c116f857120524f754730dcp@chr12:77084875..77084885, +
2.74e-44FFCP PHASE2:Mm9::chr9:40215608..40215613,-#_1f8d5cee9c116f857120524f754730dcp@chr9:40215608..40215613, -
2.74e-44FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_1f8d5cee9c116f857120524f754730dcp6@Jag1
2.74e-44FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_1f8d5cee9c116f857120524f754730dcp4@Tecta
2.74e-44FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_1f8d5cee9c116f857120524f754730dcp2@Tectb
2.74e-44FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_1f8d5cee9c116f857120524f754730dcp@chr12:77084875..77084885, +
2.74e-44FFCP PHASE2:Mm9::chr10:107349418..107349423,-#_1f8d5cee9c116f857120524f754730dcp5@Otogl
2.74e-44FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_1f8d5cee9c116f857120524f754730dcp2@Tecta
2.74e-44FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_1f8d5cee9c116f857120524f754730dcp@chr9:42207697..42207705, -
2.74e-44FFCP PHASE1:Mm9::chr4:153881018..153881027,+#_1f8d5cee9c116f857120524f754730dcp@chr4:153881018..153881027, +
2.74e-44FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_1f8d5cee9c116f857120524f754730dcp@chr9:42206730..42206739, -
2.74e-44FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_1f8d5cee9c116f857120524f754730dcp@chr14:102297728..102297742, +
2.74e-44FFCP PHASE1:Mm9::chr9:40215608..40215613,-#_1f8d5cee9c116f857120524f754730dcp@chr9:40215608..40215613, -
2.74e-44FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_1f8d5cee9c116f857120524f754730dcp@chr7:29733825..29733837, -
2.74e-44FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_1f8d5cee9c116f857120524f754730dcp2@Tectb
2.74e-44FFCP PHASE1:Mm9::chr9:109965316..109965323,+#_1f8d5cee9c116f857120524f754730dcp19@Mtap4
2.74e-44FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_1f8d5cee9c116f857120524f754730dcp4@Tecta
2.74e-44FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_1f8d5cee9c116f857120524f754730dcp1@Tecta
2.74e-44FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_1f8d5cee9c116f857120524f754730dcp@chr13:48087761..48087775, -
2.74e-44FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_1f8d5cee9c116f857120524f754730dcp2@9230102O04Rik
2.74e-44FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_1f8d5cee9c116f857120524f754730dcp13@Tsga14
2.74e-44FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_1f8d5cee9c116f857120524f754730dcp@chr13:48087761..48087775, -
2.74e-44FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_1f8d5cee9c116f857120524f754730dcp@chr4:101908153..101908163, +
2.74e-44FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_1f8d5cee9c116f857120524f754730dcp@chr9:42207697..42207705, -
2.74e-44FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_1f8d5cee9c116f857120524f754730dcp@chr9:42206745..42206774, -
2.74e-44FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_1f8d5cee9c116f857120524f754730dcp@chr3:31585340..31585360, +

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