Personal tools

CL:0002432: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0002432
|alt_id=
|name=CD24-positive, CD4 single-positive thymocyte
|namespace=cell;;efo
|def="A CD4-positive, CD8-negative thymocyte that is CD24-positive and expresses high levels of the alpha-beta T cell receptor." [GOC:tfm, http://www.immgen.org/index_content.html]
|xref=
|is_a=CL:0000810
|synonym="CD24-positive, CD4 single-positive semimature thymocyte" EXACT [];;"T.4SP24int.Th" EXACT []
|comment=Described in the immgene database as being CD24-intermediate.
|comment=Described in the immgene database as being CD24-intermediate.
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-10-21T02:43:52Z
|def="A CD4-positive, CD8-negative thymocyte that is CD24-positive and expresses high levels of the alpha-beta T cell receptor." [GOC:tfm, http://www.immgen.org/index_content.html]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=CL:0002433
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002432
|is_a=CL:0000810
|is_obsolete=
|located_in=
|located_in=
|name=CD24-positive, CD4 single-positive thymocyte
|namespace=FANTOM
|obo_creation_date=2010-10-21T02:43:52Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="CD24-positive, CD4 single-positive semimature thymocyte" EXACT [];;"T.4SP24int.Th" EXACT []
|union_of=
|xref=
}}
}}

Latest revision as of 16:43, 12 September 2014

Name:CD24-positive, CD4 single-positive thymocyte
Namespace:FANTOM
Definition:"A CD4-positive, CD8-negative thymocyte that is CD24-positive and expresses high levels of the alpha-beta T cell receptor." [GOC:tfm, http://www.immgen.org/index_content.html]
Synonyms: "CD24-positive, CD4 single-positive semimature thymocyte" EXACT []
"T.4SP24int.Th" EXACT []
Comments:Described in the immgene database as being CD24-intermediate.
Created by:tmeehan
Creation date:2010-10-21T02:43:52Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000810(CD4-positive, alpha-beta thymocyte)
develops_from:CL:0002433(CD69-positive, CD4-positive single-positive thymocyte)



Children


develops from:CL:0002436 (mature CD4 single-positive thymocyte)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002432 (CD24-positive, CD4 single-positive thymocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data