CL:0002453: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=oligodendrocyte precursor cell | |name=oligodendrocyte precursor cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2010-11-10T02:51:34Z | |obo_creation_date=2010-11-10T02:51:34Z | ||
|part_of=UBERON:0001017 | |part_of=UBERON:0001017 | ||
Latest revision as of 16:43, 12 September 2014
| Name: | oligodendrocyte precursor cell |
|---|---|
| Namespace: | FANTOM |
| Definition: | "The cell type from which oligodendrocytes develop. This cell originates from multiple structures within the developing brain including the medial ganglion eminence and the lateral ganglionic eminence. These cells migrate throughout the central nervous system and persist into adulthood where they play an important role in remyelination of injured neurons." [GOC:tfm, PMID:20142420] |
| Created by: | tmeehan |
| Creation date: | 2010-11-10T02:51:34Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000123(neuron associated cell (sensu Vertebrata)) |
|---|---|
| develops_from: | CL:0000339(glioblast (sensu Vertebrata)) |
| part_of: | UBERON:0001017(central nervous system) |
Children
| is a: | FF:0000126 (oligospheres) |
|---|---|
| derives from: | FF:0000125 (human oligodendrocyte precursor sample) |
| develops from: | CL:0000128 (oligodendrocyte),CL:0000129 (microglial cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11496-119F2 (Oligodendrocyte - precursors, donor1)
- 11497-119F3
- 11576-120F1
- 11577-120F2
- 11657-122F1
- 11658-122F2
Mouse (Mus musculus)
- 11496-119F2 (Oligodendrocyte - precursors, donor1)
- 11497-119F3
- 11576-120F1
- 11577-120F2
- 11657-122F1
- 11658-122F2
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002453 (oligodendrocyte precursor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 6.94e-140 | FFCP PHASE2:Hg19::chr4:169553987..169553999,+#_e7eabaccb478cfea64a581a01bc38f17 | p@chr4:169553987..169553999, + |
| 6.94e-140 | FFCP PHASE1:Hg19::chr4:169553987..169553999,+#_e7eabaccb478cfea64a581a01bc38f17 | p@chr4:169553987..169553999, + |
| 1.28e-84 | FFCP PHASE1:Hg19::chr9:122602283..122602290,-#_0e3ab2105242dc1fa8ee0939f57ed9ed | p@chr9:122602283..122602290, - |
| 1.28e-84 | FFCP PHASE2:Hg19::chr9:122602283..122602290,-#_0e3ab2105242dc1fa8ee0939f57ed9ed | p@chr9:122602283..122602290, - |
| 6.32e-78 | FFCP PHASE2:Hg19::chr2:48919725..48919761,+#_8e9286e959d389bf93e97830a17457d9 | p@chr2:48919725..48919761, + |
| 6.32e-78 | FFCP PHASE1:Hg19::chr2:48919725..48919761,+#_8e9286e959d389bf93e97830a17457d9 | p@chr2:48919725..48919761, + |
| 8.34e-78 | FFCP PHASE2:Hg19::chr2:48919688..48919703,+#_454ff8efdcf70b07c7d63aff4fd37c33 | p@chr2:48919688..48919703, + |
| 8.34e-78 | FFCP PHASE1:Hg19::chr2:48919688..48919703,+#_454ff8efdcf70b07c7d63aff4fd37c33 | p@chr2:48919688..48919703, + |
| 7.4e-76 | FFCP PHASE2:Mm9::chr8:28132545..28132551,+#_cbacd791623a31a52f5910c3d2c3d7f2 | p@chr8:28132545..28132551, + |
| 7.4e-76 | FFCP PHASE1:Mm9::chr8:28132545..28132551,+#_cbacd791623a31a52f5910c3d2c3d7f2 | p@chr8:28132545..28132551, + |
| 7.4e-76 | FFCP PHASE2:Mm9::chr1:72873192..72873206,+#_cbacd791623a31a52f5910c3d2c3d7f2 | p@chr1:72873192..72873206, + |
| 7.4e-76 | FFCP PHASE1:Mm9::chr1:72873192..72873206,+#_cbacd791623a31a52f5910c3d2c3d7f2 | p@chr1:72873192..72873206, + |
| 1.79e-75 | FFCP PHASE2:Hg19::chr9:127025189..127025200,+#_086dd10782f36838d25e2eef723c25ad | p1@ENST00000437461 |
| 1.79e-75 | FFCP PHASE1:Hg19::chr9:127025189..127025200,+#_086dd10782f36838d25e2eef723c25ad | p1@ENST00000437461 |
| 1.79e-75 | FFCP PHASE2:Hg19::chr11:68808268..68808276,-#_086dd10782f36838d25e2eef723c25ad | p@chr11:68808268..68808276, - |
| 1.79e-75 | FFCP PHASE1:Hg19::chr11:68808268..68808276,-#_086dd10782f36838d25e2eef723c25ad | p@chr11:68808268..68808276, - |
| 2.17e-75 | FFCP PHASE2:Hg19::chr13:99349888..99349893,+#_f0948ce0ffa620ee8fa6fa57682bebed | p@chr13:99349888..99349893, + |
| 2.17e-75 | FFCP PHASE1:Hg19::chr13:99349888..99349893,+#_f0948ce0ffa620ee8fa6fa57682bebed | p@chr13:99349888..99349893, + |
| 2.83e-68 | FFCP PHASE2:Hg19::chr22:30176932..30176938,+#_fd317a91c382229ffdc2b36fd3518e37 | p@chr22:30176932..30176938, + |
| 2.83e-68 | FFCP PHASE1:Hg19::chr22:30176932..30176938,+#_fd317a91c382229ffdc2b36fd3518e37 | p@chr22:30176932..30176938, + |
| 9.18e-67 | FFCP PHASE1:Mm9::chr19:8788816..8788826,-#_83ad9338cddacad5bd63856d88ae2ec2 | p14@Slc3a2 |
| 9.18e-67 | FFCP PHASE2:Mm9::chr19:8788816..8788826,-#_83ad9338cddacad5bd63856d88ae2ec2 | p14@Slc3a2 |
| 2.24e-66 | FFCP PHASE1:Mm9::chr8:11006242..11006246,-#_68e6eba6a7524c26908c239501c9399e | p@chr8:11006242..11006246, - |
| 2.24e-66 | FFCP PHASE2:Mm9::chr8:11006242..11006246,-#_68e6eba6a7524c26908c239501c9399e | p@chr8:11006242..11006246, - |
| 1.09e-59 | FFCP PHASE2:Mm9::chr19:8788794..8788806,-#_602501272a30cc054a6d868ba9259e71 | p6@Slc3a2 |
| 1.09e-59 | FFCP PHASE2:Mm9::chr8:96677906..96677921,-#_602501272a30cc054a6d868ba9259e71 | p@chr8:96677906..96677921, - |
| 1.09e-59 | FFCP PHASE2:Mm9::chr8:96677795..96677811,+#_602501272a30cc054a6d868ba9259e71 | p@chr8:96677795..96677811, + |
| 1.09e-59 | FFCP PHASE1:Mm9::chr8:96677795..96677811,+#_602501272a30cc054a6d868ba9259e71 | p@chr8:96677795..96677811, + |
| 1.09e-59 | FFCP PHASE1:Mm9::chr3:121130390..121130408,-#_602501272a30cc054a6d868ba9259e71 | p@chr3:121130390..121130408, - |
| 1.09e-59 | FFCP PHASE2:Mm9::chr3:121130390..121130408,-#_602501272a30cc054a6d868ba9259e71 | p@chr3:121130390..121130408, - |
| 1.09e-59 | FFCP PHASE1:Mm9::chr8:96677906..96677921,-#_602501272a30cc054a6d868ba9259e71 | p@chr8:96677906..96677921, - |
| 1.09e-59 | FFCP PHASE1:Mm9::chr19:8788794..8788806,-#_602501272a30cc054a6d868ba9259e71 | p6@Slc3a2 |
| 1.33e-59 | FFCP PHASE1:Mm9::chr3:89028994..89029006,+#_c75632859c50a492ce740a03c18c478d | p5@Thbs3 |
| 1.33e-59 | FFCP PHASE2:Mm9::chr11:102758074..102758083,+#_c75632859c50a492ce740a03c18c478d | p@chr11:102758074..102758083, + |
| 1.33e-59 | FFCP PHASE1:Mm9::chr11:102758074..102758083,+#_c75632859c50a492ce740a03c18c478d | p@chr11:102758074..102758083, + |
| 1.33e-59 | FFCP PHASE2:Mm9::chr3:89028994..89029006,+#_c75632859c50a492ce740a03c18c478d | p5@Thbs3 |
| 1.98e-59 | FFCP PHASE2:Mm9::chr14:122864178..122864180,+#_19b62348bebd8eb379fdc9ec3af7040d | p@chr14:122864178..122864180, + |
| 1.98e-59 | FFCP PHASE1:Mm9::chr14:122864178..122864180,+#_19b62348bebd8eb379fdc9ec3af7040d | p@chr14:122864178..122864180, + |
| 4.76e-57 | FFCP PHASE2:Hg19::chr8:32488262..32488265,+#_bfc0dae0a571adc108173b4ce759a881 | p@chr8:32488262..32488265, + |
| 4.76e-57 | FFCP PHASE1:Hg19::chr8:32488262..32488265,+#_bfc0dae0a571adc108173b4ce759a881 | p@chr8:32488262..32488265, + |
| 3.38e-56 | FFCP PHASE2:Mm9::chr11:102807862..102807882,-#_58b31dd99ce7ffaee86db5ba8453bd56 | p4@C1ql1 |
| 3.38e-56 | FFCP PHASE1:Mm9::chr11:102807862..102807882,-#_58b31dd99ce7ffaee86db5ba8453bd56 | p4@C1ql1 |
| 3.38e-56 | FFCP PHASE1:Mm9::chr9:37174919..37174932,+#_58b31dd99ce7ffaee86db5ba8453bd56 | p3@Hepacam |
| 3.38e-56 | FFCP PHASE2:Mm9::chr9:37174919..37174932,+#_58b31dd99ce7ffaee86db5ba8453bd56 | p3@Hepacam |
| 4.2e-56 | FFCP PHASE2:Mm9::chr11:102754827..102754845,-#_ed1a620bb003366bec5dd052fdb17fc1 | p@chr11:102754827..102754845, - |
| 4.2e-56 | FFCP PHASE1:Mm9::chr11:102754827..102754845,-#_ed1a620bb003366bec5dd052fdb17fc1 | p@chr11:102754827..102754845, - |
| 6.49e-56 | FFCP PHASE2:Mm9::chr14:70592626..70592638,-#_170d006e2d6d519da030b052f92ded0b | p@chr14:70592626..70592638, - |
| 6.49e-56 | FFCP PHASE1:Mm9::chr14:70592626..70592638,-#_170d006e2d6d519da030b052f92ded0b | p@chr14:70592626..70592638, - |
| 1.66e-54 | FFCP PHASE1:Mm9::chr11:102749254..102749263,-#_55d229ea5c7ed17a9c7eac0860f514e4 | p@chr11:102749254..102749263, - |
| 1.66e-54 | FFCP PHASE1:Mm9::chr8:73022520..73022524,+#_55d229ea5c7ed17a9c7eac0860f514e4 | p@chr8:73022520..73022524, + |
| 1.66e-54 | FFCP PHASE2:Mm9::chr16:15895800..15895814,-#_55d229ea5c7ed17a9c7eac0860f514e4 | p@chr16:15895800..15895814, - |
| 1.66e-54 | FFCP PHASE2:Mm9::chr8:73022520..73022524,+#_55d229ea5c7ed17a9c7eac0860f514e4 | p@chr8:73022520..73022524, + |
| 1.66e-54 | FFCP PHASE1:Mm9::chr16:15895800..15895814,-#_55d229ea5c7ed17a9c7eac0860f514e4 | p@chr16:15895800..15895814, - |
| 1.66e-54 | FFCP PHASE2:Mm9::chr11:102749254..102749263,-#_55d229ea5c7ed17a9c7eac0860f514e4 | p@chr11:102749254..102749263, - |
| 1.66e-54 | FFCP PHASE2:Mm9::chr11:75244815..75244826,-#_55d229ea5c7ed17a9c7eac0860f514e4 | p@chr11:75244815..75244826, - |
| 1.66e-54 | FFCP PHASE1:Mm9::chr11:75244815..75244826,-#_55d229ea5c7ed17a9c7eac0860f514e4 | p@chr11:75244815..75244826, - |
| 5.02e-54 | FFCP PHASE1:Mm9::chr8:93340930..93340944,-#_a395490638ccdd071ec51d5c064e40fa | p@chr8:93340930..93340944, - |
| 5.02e-54 | FFCP PHASE2:Mm9::chr8:93340930..93340944,-#_a395490638ccdd071ec51d5c064e40fa | p@chr8:93340930..93340944, - |
| 5.02e-54 | FFCP PHASE2:Mm9::chr8:96676892..96676904,+#_a395490638ccdd071ec51d5c064e40fa | p@chr8:96676892..96676904, + |
| 5.02e-54 | FFCP PHASE1:Mm9::chr8:96676892..96676904,+#_a395490638ccdd071ec51d5c064e40fa | p@chr8:96676892..96676904, + |
| 6.0e-54 | FFCP PHASE2:Mm9::chr3:89030096..89030118,+#_9447cd3ea8348905fc32647497a34064 | p4@Thbs3 |
| 6.0e-54 | FFCP PHASE1:Mm9::chr3:89030096..89030118,+#_9447cd3ea8348905fc32647497a34064 | p4@Thbs3 |
| 8.4e-54 | FFCP PHASE2:Hg19::chr6:45296191..45296203,+#_7d72947da782556893d301467fd907f4 | p13@RUNX2 |
| 8.4e-54 | FFCP PHASE1:Hg19::chr6:45296191..45296203,+#_7d72947da782556893d301467fd907f4 | p13@RUNX2 |
| 8.59e-54 | FFCP PHASE1:Mm9::chr12:112910294..112910300,-#_851c297ec442a77cba6a055f8ee26de6 | p@chr12:112910294..112910300, - |
| 8.59e-54 | FFCP PHASE2:Mm9::chr12:112910294..112910300,-#_851c297ec442a77cba6a055f8ee26de6 | p@chr12:112910294..112910300, - |
| 1.03e-53 | FFCP PHASE2:Mm9::chr11:102755848..102755857,-#_f3ec82fb3aff1f49a82ea85e3dc892dc | p@chr11:102755848..102755857, - |
| 1.03e-53 | FFCP PHASE1:Mm9::chr11:102755848..102755857,-#_f3ec82fb3aff1f49a82ea85e3dc892dc | p@chr11:102755848..102755857, - |
| 3.0e-53 | FFCP PHASE2:Mm9::chr7:148211055..148211073,+#_6fdbaf26c9e669676885aa5d81d77ab6 | p@chr7:148211055..148211073, + |
| 3.0e-53 | FFCP PHASE1:Mm9::chr7:148211055..148211073,+#_6fdbaf26c9e669676885aa5d81d77ab6 | p@chr7:148211055..148211073, + |
| 6.12e-53 | FFCP PHASE1:Mm9::chr2:11261132..11261153,+#_2424f084361961f7a18e534fee25ad59 | p2@Gm13293 |
| 6.12e-53 | FFCP PHASE2:Mm9::chr2:11261132..11261153,+#_2424f084361961f7a18e534fee25ad59 | p2@Gm13293 |
| 2.3e-51 | FFCP PHASE1:Hg19::chr7:42192092..42192108,-#_d572517d93e487c8c582bcabac4c1746 | p13@GLI3 |
| 2.3e-51 | FFCP PHASE2:Hg19::chr7:42192092..42192108,-#_d572517d93e487c8c582bcabac4c1746 | p13@GLI3 |
| 3.85e-51 | FFCP PHASE2:Hg19::chr20:35856764..35856768,+#_07c822b7ed8e6ff7ac3a5039a9819189 | p25@RPN2 |
| 3.85e-51 | FFCP PHASE1:Hg19::chr20:35856764..35856768,+#_07c822b7ed8e6ff7ac3a5039a9819189 | p25@RPN2 |
| 5.43e-51 | FFCP PHASE2:Hg19::chr14:33403217..33403226,+#_eb930456372fec7e6874818044c7f36d | p@chr14:33403217..33403226, + |
| 5.43e-51 | FFCP PHASE1:Hg19::chr14:33403217..33403226,+#_eb930456372fec7e6874818044c7f36d | p@chr14:33403217..33403226, + |
| 6.95e-51 | FFCP PHASE2:Hg19::chr4:169553961..169553972,+#_dea5e8e5638f8659d0c66fae96967f6d | p@chr4:169553961..169553972, + |
| 6.95e-51 | FFCP PHASE1:Hg19::chr4:169553961..169553972,+#_dea5e8e5638f8659d0c66fae96967f6d | p@chr4:169553961..169553972, + |
| 7.9e-51 | FFCP PHASE2:Hg19::chr1:98642833..98642844,+#_0158a6a9d5e1a924e2ae4082b8a8cb9f | p@chr1:98642833..98642844, + |
| 7.9e-51 | FFCP PHASE1:Hg19::chr1:98642833..98642844,+#_0158a6a9d5e1a924e2ae4082b8a8cb9f | p@chr1:98642833..98642844, + |
| 8.98e-51 | FFCP PHASE2:Hg19::chr1:98518907..98518920,+#_3bfd2365d51fa78d979d3ab8321173bb | p@chr1:98518907..98518920, + |
| 8.98e-51 | FFCP PHASE1:Hg19::chr1:98518907..98518920,+#_3bfd2365d51fa78d979d3ab8321173bb | p@chr1:98518907..98518920, + |
| 6.0e-50 | FFCP PHASE1:Mm9::chr1:72895848..72895864,+#_a4fb2f8818b9febacaf2d407377a70ff | p@chr1:72895848..72895864, + |
| 6.0e-50 | FFCP PHASE2:Mm9::chr1:72895848..72895864,+#_a4fb2f8818b9febacaf2d407377a70ff | p@chr1:72895848..72895864, + |
| 2.62e-49 | FFCP PHASE1:Mm9::chr19:8788690..8788697,-#_997405810b779efa59b013e9fd7aacae | p17@Slc3a2 |
| 2.62e-49 | FFCP PHASE2:Mm9::chr19:8788690..8788697,-#_997405810b779efa59b013e9fd7aacae | p17@Slc3a2 |
| 3.0e-49 | FFCP PHASE1:Mm9::chr1:174150595..174150602,-#_1c64888e238deb201627643617c767b2 | p@chr1:174150595..174150602, - |
| 3.0e-49 | FFCP PHASE2:Mm9::chr1:174150595..174150602,-#_1c64888e238deb201627643617c767b2 | p@chr1:174150595..174150602, - |
| 3.53e-49 | FFCP PHASE2:Mm9::chr1:174128178..174128192,-#_b9f1ae931b0cf0251d2fd8d6bcd7c8ad | p@chr1:174128178..174128192, - |
| 3.53e-49 | FFCP PHASE1:Mm9::chr1:174128178..174128192,-#_b9f1ae931b0cf0251d2fd8d6bcd7c8ad | p@chr1:174128178..174128192, - |
| 3.83e-49 | FFCP PHASE1:Mm9::chr8:96704054..96704065,-#_2962fdbdfd61716c62d84f3cc715981b | p@chr8:96704054..96704065, - |
| 3.83e-49 | FFCP PHASE2:Mm9::chr8:96704054..96704065,-#_2962fdbdfd61716c62d84f3cc715981b | p@chr8:96704054..96704065, - |
| 1.53e-48 | FFCP PHASE2:Mm9::chr1:72895732..72895747,-#_c7caaabbbee3447517a4ed576418ab10 | p@chr1:72895732..72895747, - |
| 1.53e-48 | FFCP PHASE1:Mm9::chr1:72895732..72895747,-#_c7caaabbbee3447517a4ed576418ab10 | p@chr1:72895732..72895747, - |
| 1.37e-47 | FFCP PHASE2:Mm9::chr1:72898598..72898634,+#_ba016775ae506d7e4e209a26055ce1c5 | p@chr1:72898598..72898634, + |
| 1.37e-47 | FFCP PHASE1:Mm9::chr1:72898598..72898634,+#_ba016775ae506d7e4e209a26055ce1c5 | p@chr1:72898598..72898634, + |
| 1.8e-47 | FFCP PHASE1:Mm9::chr1:72898658..72898669,+#_5e6e5a6942a30ee73e3290b39877f853 | p@chr1:72898658..72898669, + |
| 1.8e-47 | FFCP PHASE2:Mm9::chr1:72898658..72898669,+#_5e6e5a6942a30ee73e3290b39877f853 | p@chr1:72898658..72898669, + |
