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{{CL
{{CL
|id=CL:0002490
|alt_id=
|name=organ of Corti supporting cell
|namespace=cell
|def="A supporting cell of the organ of Corti." [GOC:tfm, MP:0004300]
|xref=
|is_a=CL:0002315
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-12-06T03:09:01Z
|def="A supporting cell of the organ of Corti." [GOC:tfm, MP:0004300]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002490
|is_a=CL:0002315
|is_obsolete=
|located_in=
|located_in=
|name=organ of Corti supporting cell
|namespace=FANTOM
|obo_creation_date=2010-12-06T03:09:01Z
|part_of=UBERON:0002227
|part_of=UBERON:0002227
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:43, 12 September 2014

Name:organ of Corti supporting cell
Namespace:FANTOM
Definition:"A supporting cell of the organ of Corti." [GOC:tfm, MP:0004300]
Created by:tmeehan
Creation date:2010-12-06T03:09:01Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002315(supporting cell of cochlea)
part_of:UBERON:0002227(spiral organ of cochlea)



Children


derives from:FF:0000279 (mouse Sox2-positive supporting cell- organ of corti sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002490 (organ of Corti supporting cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr11:119881548..119881551,-#_13c60bd72679013c674fc169bfafd9c6p19@Aatk
3.07e-86FFCP PHASE2:Mm9::chr17:34752992..34753001,-#_13c60bd72679013c674fc169bfafd9c6p5@Egfl8
3.07e-86FFCP PHASE1:Mm9::chr6:30619311..30619322,-#_13c60bd72679013c674fc169bfafd9c6p16@Tsga14
3.07e-86FFCP PHASE1:Mm9::chr14:119912363..119912365,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:119912363..119912365, +
3.07e-86FFCP PHASE2:Mm9::chr10:97109619..97109632,+#_13c60bd72679013c674fc169bfafd9c6p5@Epyc
3.07e-86FFCP PHASE1:Mm9::chr10:24310748..24310749,+#_13c60bd72679013c674fc169bfafd9c6p@chr10:24310748..24310749, +
3.07e-86FFCP PHASE2:Mm9::chr14:102291443..102291451,-#_13c60bd72679013c674fc169bfafd9c6p@chr14:102291443..102291451, -
3.07e-86FFCP PHASE1:Mm9::chr19:55270369..55270394,+#_13c60bd72679013c674fc169bfafd9c6p@chr19:55270369..55270394, +
3.07e-86FFCP PHASE2:Mm9::chr19:55270369..55270394,+#_13c60bd72679013c674fc169bfafd9c6p@chr19:55270369..55270394, +
3.07e-86FFCP PHASE2:Mm9::chr7:128226917..128226918,+#_13c60bd72679013c674fc169bfafd9c6p2@Otoa
3.07e-86FFCP PHASE1:Mm9::chr4:151450365..151450374,+#_13c60bd72679013c674fc169bfafd9c6p@chr4:151450365..151450374, +
3.07e-86FFCP PHASE1:Mm9::chr9:42207838..42207847,-#_13c60bd72679013c674fc169bfafd9c6p14@Tecta
3.07e-86FFCP PHASE1:Mm9::chr10:97112452..97112459,+#_13c60bd72679013c674fc169bfafd9c6p@chr10:97112452..97112459, +
3.07e-86FFCP PHASE2:Mm9::chr4:151450310..151450318,+#_13c60bd72679013c674fc169bfafd9c6p@chr4:151450310..151450318, +
3.07e-86FFCP PHASE1:Mm9::chr9:42202683..42202684,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:42202683..42202684, -
3.07e-86FFCP PHASE1:Mm9::chr14:102291551..102291553,-#_13c60bd72679013c674fc169bfafd9c6p@chr14:102291551..102291553, -
3.07e-86FFCP PHASE2:Mm9::chr7:59135658..59135665,+#_13c60bd72679013c674fc169bfafd9c6p22@Gas2
3.07e-86FFCP PHASE2:Mm9::chr9:42139059..42139081,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:42139059..42139081, -
3.07e-86FFCP PHASE2:Mm9::chr10:67372807..67372809,+#_13c60bd72679013c674fc169bfafd9c6p@chr10:67372807..67372809, +
3.07e-86FFCP PHASE2:Mm9::chr5:113939859..113939865,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:113939859..113939865, +
3.07e-86FFCP PHASE1:Mm9::chr7:59135658..59135665,+#_13c60bd72679013c674fc169bfafd9c6p22@Gas2
3.07e-86FFCP PHASE2:Mm9::chr15:94418486..94418491,-#_13c60bd72679013c674fc169bfafd9c6p@chr15:94418486..94418491, -
3.07e-86FFCP PHASE2:Mm9::chr11:119881548..119881551,-#_13c60bd72679013c674fc169bfafd9c6p19@Aatk
3.07e-86FFCP PHASE1:Mm9::chr10:107349495..107349500,-#_13c60bd72679013c674fc169bfafd9c6p6@Otogl
3.07e-86FFCP PHASE1:Mm9::chr5:92800684..92800687,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:92800684..92800687, +
3.07e-86FFCP PHASE1:Mm9::chr15:94418486..94418491,-#_13c60bd72679013c674fc169bfafd9c6p@chr15:94418486..94418491, -
3.07e-86FFCP PHASE1:Mm9::chr14:62578740..62578749,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:62578740..62578749, +
3.07e-86FFCP PHASE2:Mm9::chr9:77109269..77109270,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:77109269..77109270, -
3.07e-86FFCP PHASE2:Mm9::chr2:163517841..163517844,-#_13c60bd72679013c674fc169bfafd9c6p1@ENSMUST00000154065
3.07e-86FFCP PHASE2:Mm9::chr4:151450365..151450374,+#_13c60bd72679013c674fc169bfafd9c6p@chr4:151450365..151450374, +
3.07e-86FFCP PHASE2:Mm9::chr9:42147036..42147053,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:42147036..42147053, -
3.07e-86FFCP PHASE2:Mm9::chr15:55289275..55289297,+#_13c60bd72679013c674fc169bfafd9c6p@chr15:55289275..55289297, +
3.07e-86FFCP PHASE2:Mm9::chr14:102298599..102298602,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:102298599..102298602, +
3.07e-86FFCP PHASE2:Mm9::chr5:113939919..113939925,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:113939919..113939925, +
3.07e-86FFCP PHASE2:Mm9::chr14:62578740..62578749,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:62578740..62578749, +
3.07e-86FFCP PHASE1:Mm9::chr10:97109619..97109632,+#_13c60bd72679013c674fc169bfafd9c6p5@Epyc
3.07e-86FFCP PHASE2:Mm9::chr14:119912363..119912365,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:119912363..119912365, +
3.07e-86FFCP PHASE2:Mm9::chr15:94418515..94418518,-#_13c60bd72679013c674fc169bfafd9c6p@chr15:94418515..94418518, -
3.07e-86FFCP PHASE2:Mm9::chr14:102291551..102291553,-#_13c60bd72679013c674fc169bfafd9c6p@chr14:102291551..102291553, -
3.07e-86FFCP PHASE2:Mm9::chr10:24310748..24310749,+#_13c60bd72679013c674fc169bfafd9c6p@chr10:24310748..24310749, +
3.07e-86FFCP PHASE1:Mm9::chr5:92800735..92800736,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:92800735..92800736, +
3.07e-86FFCP PHASE2:Mm9::chr14:48406009..48406013,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:48406009..48406013, +
3.07e-86FFCP PHASE1:Mm9::chr15:94418515..94418518,-#_13c60bd72679013c674fc169bfafd9c6p@chr15:94418515..94418518, -
3.07e-86FFCP PHASE2:Mm9::chr6:30619458..30619461,-#_13c60bd72679013c674fc169bfafd9c6p17@Tsga14
3.07e-86FFCP PHASE2:Mm9::chr9:77109306..77109314,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:77109306..77109314, -
3.07e-86FFCP PHASE1:Mm9::chr10:67372807..67372809,+#_13c60bd72679013c674fc169bfafd9c6p@chr10:67372807..67372809, +
3.07e-86FFCP PHASE2:Mm9::chr9:42207838..42207847,-#_13c60bd72679013c674fc169bfafd9c6p14@Tecta
3.07e-86FFCP PHASE2:Mm9::chr9:42202683..42202684,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:42202683..42202684, -
3.07e-86FFCP PHASE1:Mm9::chr9:77109269..77109270,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:77109269..77109270, -
3.07e-86FFCP PHASE1:Mm9::chr6:30619458..30619461,-#_13c60bd72679013c674fc169bfafd9c6p17@Tsga14
3.07e-86FFCP PHASE2:Mm9::chr10:97112452..97112459,+#_13c60bd72679013c674fc169bfafd9c6p@chr10:97112452..97112459, +
3.07e-86FFCP PHASE1:Mm9::chr19:23001562..23001563,+#_13c60bd72679013c674fc169bfafd9c6p@chr19:23001562..23001563, +
3.07e-86FFCP PHASE1:Mm9::chr9:42139059..42139081,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:42139059..42139081, -
3.07e-86FFCP PHASE1:Mm9::chr14:102291443..102291451,-#_13c60bd72679013c674fc169bfafd9c6p@chr14:102291443..102291451, -
3.07e-86FFCP PHASE1:Mm9::chr2:163517841..163517844,-#_13c60bd72679013c674fc169bfafd9c6p1@ENSMUST00000154065
3.07e-86FFCP PHASE2:Mm9::chr5:92800684..92800687,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:92800684..92800687, +
3.07e-86FFCP PHASE1:Mm9::chr5:113939859..113939865,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:113939859..113939865, +
3.07e-86FFCP PHASE2:Mm9::chr6:30620092..30620097,+#_13c60bd72679013c674fc169bfafd9c6p@chr6:30620092..30620097, +
3.07e-86FFCP PHASE1:Mm9::chr17:34752992..34753001,-#_13c60bd72679013c674fc169bfafd9c6p5@Egfl8
3.07e-86FFCP PHASE2:Mm9::chr10:107349495..107349500,-#_13c60bd72679013c674fc169bfafd9c6p6@Otogl
3.07e-86FFCP PHASE1:Mm9::chr14:48406009..48406013,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:48406009..48406013, +
3.07e-86FFCP PHASE1:Mm9::chr7:128226917..128226918,+#_13c60bd72679013c674fc169bfafd9c6p2@Otoa
3.07e-86FFCP PHASE1:Mm9::chr15:55289275..55289297,+#_13c60bd72679013c674fc169bfafd9c6p@chr15:55289275..55289297, +
3.07e-86FFCP PHASE2:Mm9::chr19:23001562..23001563,+#_13c60bd72679013c674fc169bfafd9c6p@chr19:23001562..23001563, +
3.07e-86FFCP PHASE1:Mm9::chr19:55269566..55269577,-#_13c60bd72679013c674fc169bfafd9c6p@chr19:55269566..55269577, -
3.07e-86FFCP PHASE2:Mm9::chr19:55269566..55269577,-#_13c60bd72679013c674fc169bfafd9c6p@chr19:55269566..55269577, -
3.07e-86FFCP PHASE1:Mm9::chr9:77109306..77109314,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:77109306..77109314, -
3.07e-86FFCP PHASE2:Mm9::chr6:30619311..30619322,-#_13c60bd72679013c674fc169bfafd9c6p16@Tsga14
3.07e-86FFCP PHASE1:Mm9::chr6:30620092..30620097,+#_13c60bd72679013c674fc169bfafd9c6p@chr6:30620092..30620097, +
3.07e-86FFCP PHASE1:Mm9::chr4:151450310..151450318,+#_13c60bd72679013c674fc169bfafd9c6p@chr4:151450310..151450318, +
3.07e-86FFCP PHASE1:Mm9::chr14:102298599..102298602,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:102298599..102298602, +
3.07e-86FFCP PHASE1:Mm9::chr9:42147036..42147053,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:42147036..42147053, -
3.07e-86FFCP PHASE2:Mm9::chr5:92800735..92800736,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:92800735..92800736, +
3.07e-86FFCP PHASE1:Mm9::chr5:113939919..113939925,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:113939919..113939925, +
2.74e-44FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_070c3f4c1f160b92ec7dc4b69cec2343p2@uc007rhb.1
2.74e-44FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_070c3f4c1f160b92ec7dc4b69cec2343p3@Tecta
2.74e-44FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_070c3f4c1f160b92ec7dc4b69cec2343p@chr9:42207375..42207384, -
2.74e-44FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_070c3f4c1f160b92ec7dc4b69cec2343p2@9230102O04Rik
2.74e-44FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_070c3f4c1f160b92ec7dc4b69cec2343p1@Otog
2.74e-44FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_070c3f4c1f160b92ec7dc4b69cec2343p@chr14:102297728..102297742, +
2.74e-44FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_070c3f4c1f160b92ec7dc4b69cec2343p3@Otogl
2.74e-44FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_070c3f4c1f160b92ec7dc4b69cec2343p1@Tecta
2.74e-44FFCP PHASE1:Mm9::chr5:115995281..115995324,+#_070c3f4c1f160b92ec7dc4b69cec2343p14@Pxn
2.74e-44FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_070c3f4c1f160b92ec7dc4b69cec2343p@chr15:58022966..58022995, -
2.74e-44FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_070c3f4c1f160b92ec7dc4b69cec2343p@chr13:48087761..48087775, -
2.74e-44FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_070c3f4c1f160b92ec7dc4b69cec2343p@chr3:31585340..31585360, +
2.74e-44FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_070c3f4c1f160b92ec7dc4b69cec2343p@chr3:81012915..81012923, +
2.74e-44FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_070c3f4c1f160b92ec7dc4b69cec2343p@chr9:42206745..42206774, -
2.74e-44FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_070c3f4c1f160b92ec7dc4b69cec2343p@chr3:31585340..31585360, +
2.74e-44FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_070c3f4c1f160b92ec7dc4b69cec2343p@chr8:13425469..13425503, +
2.74e-44FFCP PHASE1:Mm9::chr11:119868636..119868638,+#_070c3f4c1f160b92ec7dc4b69cec2343p@chr11:119868636..119868638, +
2.74e-44FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_070c3f4c1f160b92ec7dc4b69cec2343p11@Tsga14
2.74e-44FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_070c3f4c1f160b92ec7dc4b69cec2343p2@Otogl
2.74e-44FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_070c3f4c1f160b92ec7dc4b69cec2343p@chr7:27964761..27964768, +
2.74e-44FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_070c3f4c1f160b92ec7dc4b69cec2343p@chr7:139597684..139597691, +
2.74e-44FFCP PHASE2:Mm9::chr9:109965316..109965323,+#_070c3f4c1f160b92ec7dc4b69cec2343p19@Mtap4
2.74e-44FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_070c3f4c1f160b92ec7dc4b69cec2343p2@Otol1
2.74e-44FFCP PHASE2:Mm9::chr4:153881018..153881027,+#_070c3f4c1f160b92ec7dc4b69cec2343p@chr4:153881018..153881027, +
2.74e-44FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_070c3f4c1f160b92ec7dc4b69cec2343p@chr11:8405038..8405048, -
2.74e-44FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_070c3f4c1f160b92ec7dc4b69cec2343p10@Tecta

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