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{{CL
{{CL
|id=CL:0002573
|alt_id=
|name=Schwann cell
|namespace=cell
|def="A glial cell that ensheathes axons of neuron in the peripheral nervous system and are necessary for their maintainance and function." [GOC:tfm]
|xref=BTO:0001220
|is_a=CL:0000243
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-03-02T01:19:27Z
|def="A glial cell that ensheathes axons of neuron in the peripheral nervous system and are necessary for their maintainance and function." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002573
|is_a=CL:0000243
|is_obsolete=
|located_in=
|located_in=
|name=Schwann cell
|namespace=FANTOM
|obo_creation_date=2011-03-02T01:19:27Z
|part_of=UBERON:0000010
|part_of=UBERON:0000010
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=BTO:0001220
}}
}}

Latest revision as of 16:44, 12 September 2014

Name:Schwann cell
Namespace:FANTOM
Definition:"A glial cell that ensheathes axons of neuron in the peripheral nervous system and are necessary for their maintainance and function." [GOC:tfm]
Xrefs:
links:
BTO:0001220
Created by:tmeehan
Creation date:2011-03-02T01:19:27Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000243(glial cell (sensu Vertebrata))
part_of:UBERON:0000010(peripheral nervous system)



Children


is a:CL:0000218 (myelinating Schwann cell;;Schwann cell),CL:0002376 (non-myelinating Schwann cell),CL:0002377 (immature Schwann cell)
derives from:FF:0000116 (mouse Schwann cell sample),FF:0000159 (human Schwann cell sample),FF:0103225 (neurilemoma cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002573 (Schwann cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.98e-131FFCP PHASE2:Hg19::chr8:36807722..36807727,-#_d23f35808b012f4ad5c9688c361c4df4p@chr8:36807722..36807727, -
8.98e-131FFCP PHASE1:Hg19::chr3:189506429..189506448,+#_d23f35808b012f4ad5c9688c361c4df4p@chr3:189506429..189506448, +
8.98e-131FFCP PHASE1:Hg19::chr7:15599916..15599923,-#_d23f35808b012f4ad5c9688c361c4df4p@chr7:15599916..15599923, -
8.98e-131FFCP PHASE2:Hg19::chr20:40634129..40634138,+#_d23f35808b012f4ad5c9688c361c4df4p@chr20:40634129..40634138, +
8.98e-131FFCP PHASE2:Hg19::chr3:189506429..189506448,+#_d23f35808b012f4ad5c9688c361c4df4p@chr3:189506429..189506448, +
8.98e-131FFCP PHASE2:Hg19::chr7:15599916..15599923,-#_d23f35808b012f4ad5c9688c361c4df4p@chr7:15599916..15599923, -
8.98e-131FFCP PHASE1:Hg19::chr8:36807722..36807727,-#_d23f35808b012f4ad5c9688c361c4df4p@chr8:36807722..36807727, -
8.98e-131FFCP PHASE1:Hg19::chr20:40634129..40634138,+#_d23f35808b012f4ad5c9688c361c4df4p@chr20:40634129..40634138, +
6.24e-88FFCP PHASE1:Hg19::chr10:28297133..28297154,-#_e7d731f50f863ed3290d2269afda5dc4p@chr10:28297133..28297154, -
6.24e-88FFCP PHASE1:Hg19::chr1:152748895..152748921,+#_e7d731f50f863ed3290d2269afda5dc4p1@LCE1F
6.24e-88FFCP PHASE2:Hg19::chr10:28297133..28297154,-#_e7d731f50f863ed3290d2269afda5dc4p@chr10:28297133..28297154, -
6.24e-88FFCP PHASE2:Hg19::chr1:152748895..152748921,+#_e7d731f50f863ed3290d2269afda5dc4p1@LCE1F
6.24e-88FFCP PHASE1:Hg19::chr3:6221506..6221523,-#_e7d731f50f863ed3290d2269afda5dc4p@chr3:6221506..6221523, -
6.24e-88FFCP PHASE2:Hg19::chr3:6221506..6221523,-#_e7d731f50f863ed3290d2269afda5dc4p@chr3:6221506..6221523, -
1.52e-87FFCP PHASE2:Hg19::chr4:177796841..177796851,+#_e593e05ce3f44d3366bd7477a63d86a1p1@ENST00000508790
1.52e-87FFCP PHASE2:Hg19::chr11:127965904..127965913,+#_e593e05ce3f44d3366bd7477a63d86a1p@chr11:127965904..127965913, +
1.52e-87FFCP PHASE1:Hg19::chr10:110165577..110165582,-#_e593e05ce3f44d3366bd7477a63d86a1p@chr10:110165577..110165582, -
1.52e-87FFCP PHASE2:Hg19::chr10:110165577..110165582,-#_e593e05ce3f44d3366bd7477a63d86a1p@chr10:110165577..110165582, -
1.52e-87FFCP PHASE1:Hg19::chr4:177796841..177796851,+#_e593e05ce3f44d3366bd7477a63d86a1p1@ENST00000508790
1.52e-87FFCP PHASE1:Hg19::chr11:127965904..127965913,+#_e593e05ce3f44d3366bd7477a63d86a1p@chr11:127965904..127965913, +
1.87e-86FFCP PHASE1:Mm9::chr11:99720036..99720055,-#_20d358eda0c9b671683337ddf387ec9dp@chr11:99720036..99720055, -
1.87e-86FFCP PHASE1:Mm9::chr9:32560436..32560445,+#_20d358eda0c9b671683337ddf387ec9dp@chr9:32560436..32560445, +
1.87e-86FFCP PHASE1:Mm9::chr7:138011022..138011028,+#_20d358eda0c9b671683337ddf387ec9dp@chr7:138011022..138011028, +
1.87e-86FFCP PHASE1:Mm9::chr11:56925925..56925960,-#_20d358eda0c9b671683337ddf387ec9dp@chr11:56925925..56925960, -
1.87e-86FFCP PHASE2:Mm9::chr6:17441128..17441144,+#_20d358eda0c9b671683337ddf387ec9dp@chr6:17441128..17441144, +
1.87e-86FFCP PHASE1:Mm9::chr6:31038349..31038357,-#_20d358eda0c9b671683337ddf387ec9dp2@ENSMUST00000123757
1.87e-86FFCP PHASE2:Mm9::chr6:137468262..137468263,-#_20d358eda0c9b671683337ddf387ec9dp13@Eps8
1.87e-86FFCP PHASE2:Mm9::chr9:14575585..14575594,-#_20d358eda0c9b671683337ddf387ec9dp7@1700012B09Rik
1.87e-86FFCP PHASE1:Mm9::chr18:24270578..24270588,-#_20d358eda0c9b671683337ddf387ec9dp@chr18:24270578..24270588, -
1.87e-86FFCP PHASE2:Mm9::chr17:27698308..27698322,+#_20d358eda0c9b671683337ddf387ec9dp@chr17:27698308..27698322, +
1.87e-86FFCP PHASE2:Mm9::chr13:20332675..20332683,+#_20d358eda0c9b671683337ddf387ec9dp@chr13:20332675..20332683, +
1.87e-86FFCP PHASE1:Mm9::chr18:57302359..57302364,+#_20d358eda0c9b671683337ddf387ec9dp18@Megf10
1.87e-86FFCP PHASE2:Mm9::chr1:92754564..92754577,+#_20d358eda0c9b671683337ddf387ec9dp@chr1:92754564..92754577, +
1.87e-86FFCP PHASE2:Mm9::chr7:138011022..138011028,+#_20d358eda0c9b671683337ddf387ec9dp@chr7:138011022..138011028, +
1.87e-86FFCP PHASE2:Mm9::chr5:152055079..152055086,+#_20d358eda0c9b671683337ddf387ec9dp@chr5:152055079..152055086, +
1.87e-86FFCP PHASE2:Mm9::chr11:19939078..19939081,+#_20d358eda0c9b671683337ddf387ec9dp@chr11:19939078..19939081, +
1.87e-86FFCP PHASE2:Mm9::chrX:70920870..70920877,+#_20d358eda0c9b671683337ddf387ec9dp21@Slc6a8
1.87e-86FFCP PHASE1:Mm9::chr1:185424641..185424650,+#_20d358eda0c9b671683337ddf387ec9dp@chr1:185424641..185424650, +
1.87e-86FFCP PHASE2:Mm9::chr18:57302359..57302364,+#_20d358eda0c9b671683337ddf387ec9dp18@Megf10
1.87e-86FFCP PHASE2:Mm9::chr1:185424641..185424650,+#_20d358eda0c9b671683337ddf387ec9dp@chr1:185424641..185424650, +
1.87e-86FFCP PHASE2:Mm9::chr11:99720036..99720055,-#_20d358eda0c9b671683337ddf387ec9dp@chr11:99720036..99720055, -
1.87e-86FFCP PHASE1:Mm9::chr6:137468262..137468263,-#_20d358eda0c9b671683337ddf387ec9dp13@Eps8
1.87e-86FFCP PHASE1:Mm9::chr11:99720058..99720068,-#_20d358eda0c9b671683337ddf387ec9dp@chr11:99720058..99720068, -
1.87e-86FFCP PHASE2:Mm9::chr2:13346379..13346390,-#_20d358eda0c9b671683337ddf387ec9dp@chr2:13346379..13346390, -
1.87e-86FFCP PHASE1:Mm9::chr7:138011031..138011037,+#_20d358eda0c9b671683337ddf387ec9dp@chr7:138011031..138011037, +
1.87e-86FFCP PHASE1:Mm9::chr13:95819359..95819371,-#_20d358eda0c9b671683337ddf387ec9dp@chr13:95819359..95819371, -
1.87e-86FFCP PHASE2:Mm9::chr13:95819359..95819371,-#_20d358eda0c9b671683337ddf387ec9dp@chr13:95819359..95819371, -
1.87e-86FFCP PHASE2:Mm9::chr6:31038349..31038357,-#_20d358eda0c9b671683337ddf387ec9dp2@ENSMUST00000123757
1.87e-86FFCP PHASE2:Mm9::chr18:24270578..24270588,-#_20d358eda0c9b671683337ddf387ec9dp@chr18:24270578..24270588, -
1.87e-86FFCP PHASE2:Mm9::chr12:45626625..45626647,+#_20d358eda0c9b671683337ddf387ec9dp@chr12:45626625..45626647, +
1.87e-86FFCP PHASE1:Mm9::chr2:13496978..13496987,+#_20d358eda0c9b671683337ddf387ec9dp@chr2:13496978..13496987, +
1.87e-86FFCP PHASE2:Mm9::chr11:56925925..56925960,-#_20d358eda0c9b671683337ddf387ec9dp@chr11:56925925..56925960, -
1.87e-86FFCP PHASE2:Mm9::chrX:149092046..149092052,-#_20d358eda0c9b671683337ddf387ec9dp@chrX:149092046..149092052, -
1.87e-86FFCP PHASE1:Mm9::chr18:57302368..57302389,+#_20d358eda0c9b671683337ddf387ec9dp7@Megf10
1.87e-86FFCP PHASE1:Mm9::chrX:149092046..149092052,-#_20d358eda0c9b671683337ddf387ec9dp@chrX:149092046..149092052, -
1.87e-86FFCP PHASE1:Mm9::chr14:74279307..74279342,+#_20d358eda0c9b671683337ddf387ec9dp@chr14:74279307..74279342, +
1.87e-86FFCP PHASE2:Mm9::chr7:138011031..138011037,+#_20d358eda0c9b671683337ddf387ec9dp@chr7:138011031..138011037, +
1.87e-86FFCP PHASE1:Mm9::chr9:14575585..14575594,-#_20d358eda0c9b671683337ddf387ec9dp7@1700012B09Rik
1.87e-86FFCP PHASE1:Mm9::chr15:87485458..87485465,+#_20d358eda0c9b671683337ddf387ec9dp@chr15:87485458..87485465, +
1.87e-86FFCP PHASE2:Mm9::chr15:87485458..87485465,+#_20d358eda0c9b671683337ddf387ec9dp@chr15:87485458..87485465, +
1.87e-86FFCP PHASE2:Mm9::chr18:57302368..57302389,+#_20d358eda0c9b671683337ddf387ec9dp7@Megf10
1.87e-86FFCP PHASE2:Mm9::chr11:99720058..99720068,-#_20d358eda0c9b671683337ddf387ec9dp@chr11:99720058..99720068, -
1.87e-86FFCP PHASE1:Mm9::chr11:19939078..19939081,+#_20d358eda0c9b671683337ddf387ec9dp@chr11:19939078..19939081, +
1.87e-86FFCP PHASE1:Mm9::chr7:114866423..114866442,+#_20d358eda0c9b671683337ddf387ec9dp@chr7:114866423..114866442, +
1.87e-86FFCP PHASE1:Mm9::chr5:152054997..152055007,+#_20d358eda0c9b671683337ddf387ec9dp@chr5:152054997..152055007, +
1.87e-86FFCP PHASE1:Mm9::chr9:50562386..50562393,+#_20d358eda0c9b671683337ddf387ec9dp@chr9:50562386..50562393, +
1.87e-86FFCP PHASE1:Mm9::chr18:57302392..57302409,+#_20d358eda0c9b671683337ddf387ec9dp11@Megf10
1.87e-86FFCP PHASE2:Mm9::chr10:128359639..128359653,+#_20d358eda0c9b671683337ddf387ec9dp@chr10:128359639..128359653, +
1.87e-86FFCP PHASE2:Mm9::chr18:57302392..57302409,+#_20d358eda0c9b671683337ddf387ec9dp11@Megf10
1.87e-86FFCP PHASE1:Mm9::chr6:17413432..17413442,+#_20d358eda0c9b671683337ddf387ec9dp10@Met
1.87e-86FFCP PHASE1:Mm9::chrX:70920870..70920877,+#_20d358eda0c9b671683337ddf387ec9dp21@Slc6a8
1.87e-86FFCP PHASE2:Mm9::chr9:32560436..32560445,+#_20d358eda0c9b671683337ddf387ec9dp@chr9:32560436..32560445, +
1.87e-86FFCP PHASE1:Mm9::chr7:137963832..137963843,+#_20d358eda0c9b671683337ddf387ec9dp@chr7:137963832..137963843, +
1.87e-86FFCP PHASE1:Mm9::chr18:57302272..57302282,+#_20d358eda0c9b671683337ddf387ec9dp16@Megf10
1.87e-86FFCP PHASE1:Mm9::chr10:128359639..128359653,+#_20d358eda0c9b671683337ddf387ec9dp@chr10:128359639..128359653, +
1.87e-86FFCP PHASE1:Mm9::chr15:87485366..87485375,+#_20d358eda0c9b671683337ddf387ec9dp@chr15:87485366..87485375, +
1.87e-86FFCP PHASE1:Mm9::chr6:17441128..17441144,+#_20d358eda0c9b671683337ddf387ec9dp@chr6:17441128..17441144, +
1.87e-86FFCP PHASE2:Mm9::chr15:87485366..87485375,+#_20d358eda0c9b671683337ddf387ec9dp@chr15:87485366..87485375, +
1.87e-86FFCP PHASE2:Mm9::chr9:50562386..50562393,+#_20d358eda0c9b671683337ddf387ec9dp@chr9:50562386..50562393, +
1.87e-86FFCP PHASE2:Mm9::chr2:13496978..13496987,+#_20d358eda0c9b671683337ddf387ec9dp@chr2:13496978..13496987, +
1.87e-86FFCP PHASE1:Mm9::chr5:152055079..152055086,+#_20d358eda0c9b671683337ddf387ec9dp@chr5:152055079..152055086, +
1.87e-86FFCP PHASE2:Mm9::chr18:57302272..57302282,+#_20d358eda0c9b671683337ddf387ec9dp16@Megf10
1.87e-86FFCP PHASE2:Mm9::chr14:74279307..74279342,+#_20d358eda0c9b671683337ddf387ec9dp@chr14:74279307..74279342, +
1.87e-86FFCP PHASE1:Mm9::chr18:57302410..57302419,+#_20d358eda0c9b671683337ddf387ec9dp17@Megf10
1.87e-86FFCP PHASE2:Mm9::chr7:114866423..114866442,+#_20d358eda0c9b671683337ddf387ec9dp@chr7:114866423..114866442, +
1.87e-86FFCP PHASE2:Mm9::chr6:137465516..137465540,-#_20d358eda0c9b671683337ddf387ec9dp@chr6:137465516..137465540, -
1.87e-86FFCP PHASE2:Mm9::chr7:138004756..138004766,+#_20d358eda0c9b671683337ddf387ec9dp@chr7:138004756..138004766, +
1.87e-86FFCP PHASE2:Mm9::chr18:57302410..57302419,+#_20d358eda0c9b671683337ddf387ec9dp17@Megf10
1.87e-86FFCP PHASE1:Mm9::chr17:27698308..27698322,+#_20d358eda0c9b671683337ddf387ec9dp@chr17:27698308..27698322, +
1.87e-86FFCP PHASE1:Mm9::chr7:138004756..138004766,+#_20d358eda0c9b671683337ddf387ec9dp@chr7:138004756..138004766, +
1.87e-86FFCP PHASE1:Mm9::chr1:92754564..92754577,+#_20d358eda0c9b671683337ddf387ec9dp@chr1:92754564..92754577, +
1.87e-86FFCP PHASE1:Mm9::chr18:57302324..57302348,+#_20d358eda0c9b671683337ddf387ec9dp6@Megf10
1.87e-86FFCP PHASE1:Mm9::chr11:95431700..95431710,-#_20d358eda0c9b671683337ddf387ec9dp@chr11:95431700..95431710, -
1.87e-86FFCP PHASE1:Mm9::chr12:45626625..45626647,+#_20d358eda0c9b671683337ddf387ec9dp@chr12:45626625..45626647, +
1.87e-86FFCP PHASE2:Mm9::chr11:95431700..95431710,-#_20d358eda0c9b671683337ddf387ec9dp@chr11:95431700..95431710, -
1.87e-86FFCP PHASE2:Mm9::chr5:152054997..152055007,+#_20d358eda0c9b671683337ddf387ec9dp@chr5:152054997..152055007, +
1.87e-86FFCP PHASE1:Mm9::chr15:87485402..87485411,+#_20d358eda0c9b671683337ddf387ec9dp@chr15:87485402..87485411, +
1.87e-86FFCP PHASE2:Mm9::chr6:17413432..17413442,+#_20d358eda0c9b671683337ddf387ec9dp10@Met
1.87e-86FFCP PHASE2:Mm9::chr15:87485402..87485411,+#_20d358eda0c9b671683337ddf387ec9dp@chr15:87485402..87485411, +
1.87e-86FFCP PHASE2:Mm9::chr7:137963832..137963843,+#_20d358eda0c9b671683337ddf387ec9dp@chr7:137963832..137963843, +

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