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{{CL
{{CL
|id=CL:0002575
|alt_id=
|name=central nervous system pericyte
|namespace=cell
|def="A pericyte of the central nervous system." [GOC:tfm]
|xref=
|is_a=CL:0000669
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-03-02T02:54:18Z
|def="A pericyte of the central nervous system." [GOC:tfm]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002575
|is_a=CL:0000669 ;;CL:0002319
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=central nervous system pericyte
|namespace=FANTOM
|obo_creation_date=2011-03-02T02:54:18Z
|part_of=UBERON:0001017
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:44, 12 September 2014

Name:central nervous system pericyte
Namespace:FANTOM
Definition:"A pericyte of the central nervous system." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-02T02:54:18Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000669(pericyte cell),CL:0002319(neural cell)
part_of:UBERON:0001017(central nervous system)



Children


derives from:FF:0000133 (human pericyte sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002575 (central nervous system pericyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.61e-131FFCP PHASE2:Hg19::chr15:57598803..57598812,+#_4b3e30501d91bbc07f1a40c64c903563p6@LOC283663
4.61e-131FFCP PHASE1:Hg19::chr15:57598803..57598812,+#_4b3e30501d91bbc07f1a40c64c903563p6@LOC283663
1.55e-98FFCP PHASE2:Hg19::chr18:8054314..8054316,-#_31a56f8dd4078168e383d9e674c7bdf6p@chr18:8054314..8054316, -
1.55e-98FFCP PHASE2:Hg19::chr13:75493774..75493776,-#_31a56f8dd4078168e383d9e674c7bdf6p@chr13:75493774..75493776, -
1.55e-98FFCP PHASE1:Hg19::chr18:8054314..8054316,-#_31a56f8dd4078168e383d9e674c7bdf6p@chr18:8054314..8054316, -
1.55e-98FFCP PHASE2:Hg19::chr5:149515832..149515837,-#_31a56f8dd4078168e383d9e674c7bdf6p@chr5:149515832..149515837, -
1.55e-98FFCP PHASE1:Hg19::chr13:75493774..75493776,-#_31a56f8dd4078168e383d9e674c7bdf6p@chr13:75493774..75493776, -
1.55e-98FFCP PHASE1:Hg19::chr5:149515832..149515837,-#_31a56f8dd4078168e383d9e674c7bdf6p@chr5:149515832..149515837, -
1.05e-79FFCP PHASE1:Hg19::chr12:279860..279871,+#_73d123cbeaf0ac3c469bd8be09633b13p@chr12:279860..279871, +
1.05e-79FFCP PHASE2:Hg19::chr12:279860..279871,+#_73d123cbeaf0ac3c469bd8be09633b13p@chr12:279860..279871, +
1.16e-78FFCP PHASE2:Hg19::chr13:100634777..100634788,+#_41cc9f92ff630ac76bb5d46a69d6a4cdp13@ZIC2
1.16e-78FFCP PHASE1:Hg19::chr13:100634777..100634788,+#_41cc9f92ff630ac76bb5d46a69d6a4cdp13@ZIC2
7.41e-67FFCP PHASE2:Hg19::chr17:75471711..75471726,+#_6a25ef937640581a2c867b0b15b9ca1dp73@SEPT9
7.41e-67FFCP PHASE1:Hg19::chr17:75471711..75471726,+#_6a25ef937640581a2c867b0b15b9ca1dp73@SEPT9
7.41e-67FFCP PHASE2:Hg19::chr5:149532703..149532711,+#_6a25ef937640581a2c867b0b15b9ca1dp@chr5:149532703..149532711, +
7.41e-67FFCP PHASE1:Hg19::chr5:149532703..149532711,+#_6a25ef937640581a2c867b0b15b9ca1dp@chr5:149532703..149532711, +
2.84e-66FFCP PHASE1:Hg19::chr11:62752310..62752313,-#_a271b8f4d052dfb6cd32bb3cd154c89cp7@SLC22A6
2.84e-66FFCP PHASE2:Hg19::chr11:62752310..62752313,-#_a271b8f4d052dfb6cd32bb3cd154c89cp7@SLC22A6
1.13e-57FFCP PHASE1:Hg19::chr3:147109858..147109861,+#_91fe173c141dc313f15e8b0d8527ed9ep@chr3:147109858..147109861, +
1.13e-57FFCP PHASE1:Hg19::chr3:147128048..147128057,+#_91fe173c141dc313f15e8b0d8527ed9ep4@AB464362
1.13e-57FFCP PHASE1:Hg19::chr5:149537789..149537803,-#_91fe173c141dc313f15e8b0d8527ed9ep@chr5:149537789..149537803, -
1.13e-57FFCP PHASE2:Hg19::chr3:147109858..147109861,+#_91fe173c141dc313f15e8b0d8527ed9ep@chr3:147109858..147109861, +
1.13e-57FFCP PHASE2:Hg19::chr3:147128048..147128057,+#_91fe173c141dc313f15e8b0d8527ed9ep4@AB464362
1.13e-57FFCP PHASE2:Hg19::chr5:149537789..149537803,-#_91fe173c141dc313f15e8b0d8527ed9ep@chr5:149537789..149537803, -
6.36e-57FFCP PHASE1:Hg19::chr12:15941738..15941768,+#_d0144c8cdddceff5cfd5fe949c0d8e18p@chr12:15941738..15941768, +
6.36e-57FFCP PHASE2:Hg19::chr12:15941738..15941768,+#_d0144c8cdddceff5cfd5fe949c0d8e18p@chr12:15941738..15941768, +
8.82e-51FFCP PHASE2:Hg19::chr3:147128031..147128038,+#_019514f4129958661a1af174964274ecp7@AB464362
8.82e-51FFCP PHASE1:Hg19::chr3:147128031..147128038,+#_019514f4129958661a1af174964274ecp7@AB464362
2.74e-50FFCP PHASE1:Hg19::chr11:67186174..67186179,+#_cabd9489343277ee53268976c9c09562p@chr11:67186174..67186179, +
2.74e-50FFCP PHASE2:Hg19::chr19:48281847..48281853,+#_cabd9489343277ee53268976c9c09562p7@SEPW1
2.74e-50FFCP PHASE2:Hg19::chr11:65061637..65061642,+#_cabd9489343277ee53268976c9c09562p13@POLA2
2.74e-50FFCP PHASE1:Hg19::chr19:48281847..48281853,+#_cabd9489343277ee53268976c9c09562p7@SEPW1
2.74e-50FFCP PHASE2:Hg19::chr11:67186174..67186179,+#_cabd9489343277ee53268976c9c09562p@chr11:67186174..67186179, +
2.74e-50FFCP PHASE1:Hg19::chr11:65061637..65061642,+#_cabd9489343277ee53268976c9c09562p13@POLA2
4.52e-50FFCP PHASE1:Hg19::chr5:148609626..148609631,+#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p@chr5:148609626..148609631, +
4.52e-50FFCP PHASE2:Hg19::chr6:31848961..31848968,-#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p@chr6:31848961..31848968, -
4.52e-50FFCP PHASE2:Hg19::chr10:35894364..35894370,+#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p4@GJD4
4.52e-50FFCP PHASE2:Hg19::chr8:144875310..144875315,-#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p19@SCRIB
4.52e-50FFCP PHASE2:Hg19::chr20:32850613..32850632,+#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p@chr20:32850613..32850632, +
4.52e-50FFCP PHASE2:Hg19::chr1:201399370..201399380,-#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p8@TNNI1
4.52e-50FFCP PHASE1:Hg19::chr6:31848961..31848968,-#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p@chr6:31848961..31848968, -
4.52e-50FFCP PHASE1:Hg19::chr8:144875310..144875315,-#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p19@SCRIB
4.52e-50FFCP PHASE2:Hg19::chr3:165929277..165929294,-#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p@chr3:165929277..165929294, -
4.52e-50FFCP PHASE1:Hg19::chr20:32850613..32850632,+#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p@chr20:32850613..32850632, +
4.52e-50FFCP PHASE2:Hg19::chr19:48283768..48283781,+#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p@chr19:48283768..48283781, +
4.52e-50FFCP PHASE1:Hg19::chr10:35894364..35894370,+#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p4@GJD4
4.52e-50FFCP PHASE1:Hg19::chr1:201399370..201399380,-#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p8@TNNI1
4.52e-50FFCP PHASE2:Hg19::chr14:23574150..23574161,-#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p2@uc010aki.1
4.52e-50FFCP PHASE1:Hg19::chr3:165929277..165929294,-#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p@chr3:165929277..165929294, -
4.52e-50FFCP PHASE2:Hg19::chr17:56614878..56614885,-#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p@chr17:56614878..56614885, -
4.52e-50FFCP PHASE1:Hg19::chr19:48283768..48283781,+#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p@chr19:48283768..48283781, +
4.52e-50FFCP PHASE2:Hg19::chr5:148609626..148609631,+#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p@chr5:148609626..148609631, +
4.52e-50FFCP PHASE1:Hg19::chr14:23574150..23574161,-#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p2@uc010aki.1
4.52e-50FFCP PHASE1:Hg19::chr17:56614878..56614885,-#_87fd6fc5fe8ca9b9812fa92bcfdf61b5p@chr17:56614878..56614885, -
6.61e-50FFCP PHASE1:Hg19::chr14:98348860..98348862,-#_ff1a7021276f84e6365be0d2d6c1ec25p@chr14:98348860..98348862, -
6.61e-50FFCP PHASE2:Hg19::chr14:98348860..98348862,-#_ff1a7021276f84e6365be0d2d6c1ec25p@chr14:98348860..98348862, -
2.04e-45FFCP PHASE2:Hg19::chr17:48346424..48346435,+#_7215403eaf719356d3688a8faae19c6dp@chr17:48346424..48346435, +
2.04e-45FFCP PHASE1:Hg19::chr17:48346424..48346435,+#_7215403eaf719356d3688a8faae19c6dp@chr17:48346424..48346435, +
2.55e-45FFCP PHASE1:Hg19::chr11:73020686..73020697,+#_af9f488a1d332604909dce7994773e97p23@ARHGEF17
2.55e-45FFCP PHASE2:Hg19::chr11:73020686..73020697,+#_af9f488a1d332604909dce7994773e97p23@ARHGEF17
7.83e-45FFCP PHASE1:Hg19::chr11:60680190..60680212,+#_39b37b3a416a1b1a975d24c64cbff1bap@chr11:60680190..60680212, +
7.83e-45FFCP PHASE2:Hg19::chr11:60680190..60680212,+#_39b37b3a416a1b1a975d24c64cbff1bap@chr11:60680190..60680212, +
9.79e-45FFCP PHASE2:Hg19::chr4:167520111..167520112,-#_db207eed245119f55f84896b91dd5dd2p@chr4:167520111..167520112, -
9.79e-45FFCP PHASE1:Hg19::chr4:167520111..167520112,-#_db207eed245119f55f84896b91dd5dd2p@chr4:167520111..167520112, -
1.22e-44FFCP PHASE2:Hg19::chr5:158523468..158523481,-#_b67acbd62ce1783a251b74e9e3da0d83p20@EBF1
1.22e-44FFCP PHASE1:Hg19::chr5:158523468..158523481,-#_b67acbd62ce1783a251b74e9e3da0d83p20@EBF1
1.53e-44FFCP PHASE2:Hg19::chr19:46806885..46806888,+#_d36c5d8e7c3e4aa7dc7fbad3cff467dep11@HIF3A
1.53e-44FFCP PHASE1:Hg19::chr19:46806885..46806888,+#_d36c5d8e7c3e4aa7dc7fbad3cff467dep11@HIF3A
2.98e-44FFCP PHASE2:Hg19::chr11:2179591..2179596,-#_2b073c0a894d9c1935e2d110ae915d7dp5@INS-IGF2
2.98e-44FFCP PHASE1:Hg19::chr11:2179591..2179596,-#_2b073c0a894d9c1935e2d110ae915d7dp5@INS-IGF2
3.99e-41FFCP PHASE2:Hg19::chr1:19778678..19778689,-#_50b54af69bc561c43cfb1b16ed58dd6cp@chr1:19778678..19778689, -
3.99e-41FFCP PHASE1:Hg19::chr1:19778678..19778689,-#_50b54af69bc561c43cfb1b16ed58dd6cp@chr1:19778678..19778689, -
1.1e-40FFCP PHASE2:Hg19::chr11:65357541..65357549,+#_bd1e2f87b5c5e5f2ef18ee542d93da05p@chr11:65357541..65357549, +
1.1e-40FFCP PHASE1:Hg19::chr11:65357541..65357549,+#_bd1e2f87b5c5e5f2ef18ee542d93da05p@chr11:65357541..65357549, +
1.34e-40FFCP PHASE1:Hg19::chr11:62752220..62752231,-#_a5cf2292defe389e09df2bb782f6765cp4@SLC22A6
1.34e-40FFCP PHASE2:Hg19::chr11:62752220..62752231,-#_a5cf2292defe389e09df2bb782f6765cp4@SLC22A6
2.73e-37FFCP PHASE2:Hg19::chr3:147138953..147138965,+#_bff536bc5456d2cbf76b60319b202883p19@ZIC1
2.73e-37FFCP PHASE1:Hg19::chr3:147138953..147138965,+#_bff536bc5456d2cbf76b60319b202883p19@ZIC1
5.69e-37FFCP PHASE1:Hg19::chr14:23574186..23574212,-#_462eb1956a4330c386da427976ffec20p1@uc010aki.1
5.69e-37FFCP PHASE2:Hg19::chr14:23574186..23574212,-#_462eb1956a4330c386da427976ffec20p1@uc010aki.1
1.18e-36FFCP PHASE2:Hg19::chr13:100633689..100633700,+#_ff568e38703219a69c9a2b5d026346c4p10@ZIC2
1.18e-36FFCP PHASE1:Hg19::chr13:100633689..100633700,+#_ff568e38703219a69c9a2b5d026346c4p10@ZIC2
1.84e-34FFCP PHASE2:Hg19::chr3:147123837..147123848,-#_af0365c18a8ed810853e858dc8cd21d2p7@ZIC4
1.84e-34FFCP PHASE1:Hg19::chr3:147123837..147123848,-#_af0365c18a8ed810853e858dc8cd21d2p7@ZIC4
5.04e-34FFCP PHASE1:Hg19::chr10:35894264..35894279,+#_af2a92bca8a30bc3596bf87f9adf6b61p2@GJD4
5.04e-34FFCP PHASE2:Hg19::chr8:145541963..145541978,-#_af2a92bca8a30bc3596bf87f9adf6b61p17@DGAT1
5.04e-34FFCP PHASE1:Hg19::chr8:145541963..145541978,-#_af2a92bca8a30bc3596bf87f9adf6b61p17@DGAT1
5.04e-34FFCP PHASE2:Hg19::chr10:35894264..35894279,+#_af2a92bca8a30bc3596bf87f9adf6b61p2@GJD4
7.05e-34FFCP PHASE2:Hg19::chr5:126737401..126737412,+#_9326e9a82c012fc25187672ff9c92d93p@chr5:126737401..126737412, +
7.05e-34FFCP PHASE2:Hg19::chr11:117063295..117063304,+#_9326e9a82c012fc25187672ff9c92d93p23@SIDT2
7.05e-34FFCP PHASE2:Hg19::chr3:147128275..147128285,+#_9326e9a82c012fc25187672ff9c92d93p5@AB464362
7.05e-34FFCP PHASE1:Hg19::chr11:66633918..66633936,-#_9326e9a82c012fc25187672ff9c92d93p@chr11:66633918..66633936, -
7.05e-34FFCP PHASE1:Hg19::chr5:126737401..126737412,+#_9326e9a82c012fc25187672ff9c92d93p@chr5:126737401..126737412, +
7.05e-34FFCP PHASE1:Hg19::chr12:56548421..56548450,+#_9326e9a82c012fc25187672ff9c92d93p@chr12:56548421..56548450, +
7.05e-34FFCP PHASE1:Hg19::chr3:147128275..147128285,+#_9326e9a82c012fc25187672ff9c92d93p5@AB464362
7.05e-34FFCP PHASE1:Hg19::chr11:117063295..117063304,+#_9326e9a82c012fc25187672ff9c92d93p23@SIDT2
7.05e-34FFCP PHASE2:Hg19::chr19:18554761..18554768,-#_9326e9a82c012fc25187672ff9c92d93p4@ENST00000541164
7.05e-34FFCP PHASE2:Hg19::chr9:130830760..130830783,+#_9326e9a82c012fc25187672ff9c92d93p11@SLC25A25
7.05e-34FFCP PHASE2:Hg19::chr12:56548421..56548450,+#_9326e9a82c012fc25187672ff9c92d93p@chr12:56548421..56548450, +
7.05e-34FFCP PHASE1:Hg19::chr19:18554761..18554768,-#_9326e9a82c012fc25187672ff9c92d93p4@ENST00000541164

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