CL:0002601: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=uterine smooth muscle cell | |name=uterine smooth muscle cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2011-03-06T05:53:28Z | |obo_creation_date=2011-03-06T05:53:28Z | ||
|part_of=UBERON:0000995 | |part_of=UBERON:0000995 |
Latest revision as of 16:45, 12 September 2014
Name: | uterine smooth muscle cell |
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Namespace: | FANTOM |
Definition: | "A smooth muscle cell of the uterus." [GOC:tfm] |
Created by: | tmeehan |
Creation date: | 2011-03-06T05:53:28Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000192(smooth muscle cell) |
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part_of: | UBERON:0000995(uterus) |
Children
derives from: | FF:0000185 (human uterine smooth muscle cell sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11258-116F7 (Smooth Muscle Cells - Uterine, donor1)
- 11466-119B8 (Smooth Muscle Cells - Uterine, donor3)
- 11630-122C1
Mouse (Mus musculus)
- 11258-116F7 (Smooth Muscle Cells - Uterine, donor1)
- 11466-119B8 (Smooth Muscle Cells - Uterine, donor3)
- 11630-122C1
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002601 (uterine smooth muscle cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data