CL:0002604: Difference between revisions
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|located_in= | |located_in= | ||
|name=astrocyte of the hippocampus | |name=astrocyte of the hippocampus | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2011-03-06T06:57:33Z | |obo_creation_date=2011-03-06T06:57:33Z | ||
|part_of=UBERON:0001954 | |part_of=UBERON:0001954 |
Latest revision as of 16:45, 12 September 2014
Name: | astrocyte of the hippocampus |
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Namespace: | FANTOM |
Created by: | tmeehan |
Creation date: | 2011-03-06T06:57:33Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0012000(astrocyte of the forebrain),CL:1001580(hippocampus glial cell) |
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part_of: | UBERON:0001954(Ammon's horn) |
Children
is a: | FF:0000193 (astrocyte of the hippocampus) |
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derives from: | FF:0000197 (mouse astrocyte of hippocampus sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11551-120C3 (Mouse Astrocytes - hippocampus, donor2)
- 11632-122C3 (Mouse Astrocytes - hippocampus, donor3)
- 11709-123B8 (Mouse Astrocytes - hippocampus, donor1)
Mouse (Mus musculus)
- 11551-120C3 (Mouse Astrocytes - hippocampus, donor2)
- 11632-122C3 (Mouse Astrocytes - hippocampus, donor3)
- 11709-123B8 (Mouse Astrocytes - hippocampus, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002604 (astrocyte of the hippocampus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data