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CL:1000413: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=endothelial cell of artery
|name=endothelial cell of artery
|namespace=cell
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0001637;;UBERON:0001917
|part_of=UBERON:0001637;;UBERON:0001917

Latest revision as of 16:46, 12 September 2014

Name:endothelial cell of artery
Namespace:FANTOM
Definition:"A blood vessel endothelial cell that is part of an arterial endothelium." [GOC:tfm]
Xrefs:
links:

BTO:0004758
FMA:67761

KUPO:0001095
Synonyms: "arterial endothelial cell" EXACT []
Alt_id: CL:0002542


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000071(blood vessel endothelial cell)
part_of:UBERON:0001637(artery),UBERON:0001917(endothelium of artery)



Children


is a:CL:0002544 (aortic endothelial cell)
derives from:FF:0000047 (human endothelial cell of the artery sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000413 (endothelial cell of artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data