CL:1000487: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:1000487
|name=smooth muscle cell of prostate
|namespace=cell
|def="A smooth muscle cell that is part of the prostate gland." [GOC:tfm]
|xref=FMA:84583
|is_a=...") |
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="A smooth muscle cell that is part of the prostate gland." [GOC:tfm] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:1000487 | |||
|is_a=CL:0000192 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=smooth muscle cell of prostate | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0002367 | |part_of=UBERON:0002367 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
|subset= | |||
|synonym="smooth muscle fiber of prostate" EXACT [FMA:84583] | |||
|union_of= | |||
|xref=FMA:84583 | |||
}} | }} |
Latest revision as of 16:47, 12 September 2014
Name: | smooth muscle cell of prostate | ||
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Namespace: | FANTOM | ||
Definition: | "A smooth muscle cell that is part of the prostate gland." [GOC:tfm] | ||
Xrefs: |
| ||
Synonyms: | "smooth muscle fiber of prostate" EXACT [FMA:84583] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000192(smooth muscle cell) |
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part_of: | UBERON:0002367(prostate gland) |
Children
derives from: | FF:0000183 (human smooth muscle cell of prostate sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11257-116F6 (Smooth Muscle Cells - Prostate, donor1)
- 11335-117F3 (Smooth Muscle Cells - Prostate, donor2)
- 11465-119B7 (Smooth Muscle Cells - Prostate, donor3)
Mouse (Mus musculus)
- 11257-116F6 (Smooth Muscle Cells - Prostate, donor1)
- 11335-117F3 (Smooth Muscle Cells - Prostate, donor2)
- 11465-119B7 (Smooth Muscle Cells - Prostate, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000487 (smooth muscle cell of prostate), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data