DOID:0060058: Difference between revisions
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{{DOID | {{DOID | ||
| | |alt_id=DOID:1033;;DOID:353 | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="A hematologic cancer that affects lymphocytes that reside in the lymphatic system and in blood-forming organs." [url:http://en.wikipedia.org/wiki/Lymphoma, url:http://www.nlm.nih.gov/medlineplus/lymphoma.html] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=DOID:0060058 | |||
|is_a=DOID:2531 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=lymphoma | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | ||
| | |subset= | ||
| | |synonym="lymphoid cancer" EXACT [] | ||
|union_of= | |||
|xref=MSH:D008223;;NCI:C3208;;SNOMEDCT_2010_1_31:118600007;;SNOMEDCT_2010_1_31:188676008;;SNOMEDCT_2010_1_31:188694002;;SNOMEDCT_2010_1_31:188695001;;SNOMEDCT_2010_1_31:188704004;;SNOMEDCT_2010_1_31:189959002;;SNOMEDCT_2010_1_31:189965002;;SNOMEDCT_2010_1_31:21964009;;SNOMEDCT_2010_1_31:269627002;;SNOMEDCT_2010_1_31:414628006;;UMLS_CUI:C0024299;;UMLS_CUI:C0598798 | |||
}} | }} |
Latest revision as of 16:47, 12 September 2014
Name: | lymphoma | |
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Namespace: | FANTOM | |
Definition: | "A hematologic cancer that affects lymphocytes that reside in the lymphatic system and in blood-forming organs." [url:http://en.wikipedia.org/wiki/Lymphoma, url:http://www.nlm.nih.gov/medlineplus/lymphoma.html] | |
Xrefs: |
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Synonyms: | "lymphoid cancer" EXACT [] | |
Alt_id: |
DOID:1033 DOID:353 |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:2531(hematologic cancer) |
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Children
is a: | DOID:0050743 (mature T-cell and NK-cell neoplasm),DOID:0060060 (non-Hodgkin lymphoma),DOID:707 (B-cell lymphocytic neoplasm) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
- 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
- 10424-106D1 (splenic lymphoma with villous lymphocytes cell line:SLVL)
- 10435-106E3 (Hodgkin's lymphoma cell line:HD-Mar2)
- 10476-106I8 (Burkitt's lymphoma cell line:RAJI)
- 10478-107A1
- 10631-108I1 (diffuse large B-cell lymphoma cell line:CTB-1)
- 10744-110C6 (mycosis fungoides, T cell lymphoma cell line:HuT 102 TIB-162)
- 10775-110G1 (lymphoma, malignant, hairy B-cell cell line:MLMA)
- 10795-110I3 (anaplastic large cell lymphoma cell line:Ki-JK)
... further results Mouse (Mus musculus)
- 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
- 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
- 10424-106D1 (splenic lymphoma with villous lymphocytes cell line:SLVL)
- 10435-106E3 (Hodgkin's lymphoma cell line:HD-Mar2)
- 10476-106I8 (Burkitt's lymphoma cell line:RAJI)
- 10478-107A1
- 10631-108I1 (diffuse large B-cell lymphoma cell line:CTB-1)
- 10744-110C6 (mycosis fungoides, T cell lymphoma cell line:HuT 102 TIB-162)
- 10775-110G1 (lymphoma, malignant, hairy B-cell cell line:MLMA)
- 10795-110I3 (anaplastic large cell lymphoma cell line:Ki-JK)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0060058 (lymphoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data