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{{DOID
{{DOID
|id=DOID:0060058
|alt_id=DOID:1033;;DOID:353
|name=lymphoma
|namespace=
|def="A hematologic cancer that affects lymphocytes that reside in the lymphatic system and in blood-forming organs." [url:http\://en.wikipedia.org/wiki/Lymphoma, url:http\://www.nlm.nih.gov/medlineplus/lymphoma.html]
|xref=
|is_a=DOID:2531
|synonym="lymphoid cancer" EXACT []
|comment=
|comment=
|alt_id=DOID:1033;;DOID:353
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A hematologic cancer that affects lymphocytes that reside in the lymphatic system and in blood-forming organs." [url:http://en.wikipedia.org/wiki/Lymphoma, url:http://www.nlm.nih.gov/medlineplus/lymphoma.html]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:0060058
|is_a=DOID:2531
|is_obsolete=
|located_in=
|located_in=
|name=lymphoma
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
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|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|subset=
|synonym="lymphoid cancer" EXACT []
|union_of=
|xref=MSH:D008223;;NCI:C3208;;SNOMEDCT_2010_1_31:118600007;;SNOMEDCT_2010_1_31:188676008;;SNOMEDCT_2010_1_31:188694002;;SNOMEDCT_2010_1_31:188695001;;SNOMEDCT_2010_1_31:188704004;;SNOMEDCT_2010_1_31:189959002;;SNOMEDCT_2010_1_31:189965002;;SNOMEDCT_2010_1_31:21964009;;SNOMEDCT_2010_1_31:269627002;;SNOMEDCT_2010_1_31:414628006;;UMLS_CUI:C0024299;;UMLS_CUI:C0598798
}}
}}

Latest revision as of 16:47, 12 September 2014

Name:lymphoma
Namespace:FANTOM
Definition:"A hematologic cancer that affects lymphocytes that reside in the lymphatic system and in blood-forming organs." [url:http://en.wikipedia.org/wiki/Lymphoma, url:http://www.nlm.nih.gov/medlineplus/lymphoma.html]
Xrefs:
links:

MSH:D008223
NCI:C3208
SNOMEDCT_2010_1_31:118600007
SNOMEDCT_2010_1_31:188676008
SNOMEDCT_2010_1_31:188694002
SNOMEDCT_2010_1_31:188695001
SNOMEDCT_2010_1_31:188704004
SNOMEDCT_2010_1_31:189959002
SNOMEDCT_2010_1_31:189965002
SNOMEDCT_2010_1_31:21964009
SNOMEDCT_2010_1_31:269627002
SNOMEDCT_2010_1_31:414628006
UMLS_CUI:C0024299

UMLS_CUI:C0598798
Synonyms: "lymphoid cancer" EXACT []
Alt_id: DOID:1033
DOID:353

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:2531(hematologic cancer)



Children


is a:DOID:0050743 (mature T-cell and NK-cell neoplasm),DOID:0060060 (non-Hodgkin lymphoma),DOID:707 (B-cell lymphocytic neoplasm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0060058 (lymphoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data