Personal tools

DOID:120: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{DOID
{{DOID
|id=DOID:120
|alt_id=DOID:1244;;DOID:1281
|name=female reproductve organ cancer
|namespace=disease_ontology
|def="A reproductive organ cancer that is manifested in the female genitals. This includes organs such as the ovaries, fallopian tubes, uterus, cervix, vagina and vulva." [url:http\://en.wikipedia.org/wiki/Template\:Female_genital_neoplasia, url:http\://www.wrongdiagnosis.com/g/genital_system_cancer/intro.htm]
|xref=MSH:D005833;;NCI:C3053;;SNOMEDCT_2010_1_31:126907002;;SNOMEDCT_2010_1_31:188207007;;UMLS_CUI:C0017416;;UMLS_CUI:C0153585;;UMLS_CUI:C0699889
|is_a=DOID:193
|synonym="female reproductive cancer" EXACT [];;"malignant Gynecologic tumor" EXACT [NCI2004_11_17:C4913];;"malignant neoplasm of female genital organ" EXACT []
|comment=
|comment=
|alt_id=DOID:1244;;DOID:1281
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A reproductive organ cancer that is manifested in the female genitals. This includes organs such as the ovaries, fallopian tubes, uterus, cervix, vagina and vulva." [url:http://en.wikipedia.org/wiki/Template:Female_genital_neoplasia, url:http://www.wrongdiagnosis.com/g/genital_system_cancer/intro.htm]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:120
|is_a=DOID:193
|is_obsolete=
|located_in=
|located_in=
|name=female reproductive organ cancer
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym="female reproductive cancer" EXACT [];;"malignant Gynecologic tumor" EXACT [NCI2004_11_17:C4913];;"malignant neoplasm of female genital organ" EXACT []
|union_of=
|xref=MSH:D005833;;NCI:C3053;;SNOMEDCT_2010_1_31:126907002;;SNOMEDCT_2010_1_31:188207007;;UMLS_CUI:C0017416;;UMLS_CUI:C0153585;;UMLS_CUI:C0699889
}}
}}

Latest revision as of 16:48, 12 September 2014

Name:female reproductive organ cancer
Namespace:FANTOM
Definition:"A reproductive organ cancer that is manifested in the female genitals. This includes organs such as the ovaries, fallopian tubes, uterus, cervix, vagina and vulva." [url:http://en.wikipedia.org/wiki/Template:Female_genital_neoplasia, url:http://www.wrongdiagnosis.com/g/genital_system_cancer/intro.htm]
Xrefs:
links:

MSH:D005833
NCI:C3053
SNOMEDCT_2010_1_31:126907002
SNOMEDCT_2010_1_31:188207007
UMLS_CUI:C0017416
UMLS_CUI:C0153585

UMLS_CUI:C0699889
Synonyms: "female reproductive cancer" EXACT []
"malignant Gynecologic tumor" EXACT [NCI2004_11_17:C4913]
"malignant neoplasm of female genital organ" EXACT []
Alt_id: DOID:1244
DOID:1281

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:193(reproductive organ cancer)



Children


is a:DOID:2021 (placenta cancer),DOID:2394 (ovarian cancer),DOID:3001 (female reproductive endometrioid cancer),DOID:363 (uterine cancer),DOID:4362 (cervical cancer)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:120 (female reproductive organ cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.65e-39FFCP PHASE1:Hg19::chr5:136482422..136482426,+#_3f51fe198d61d0536b79e6d58b3418dcp@chr5:136482422..136482426, +
3.65e-39FFCP PHASE2:Hg19::chr5:136482422..136482426,+#_3f51fe198d61d0536b79e6d58b3418dcp@chr5:136482422..136482426, +
2.16e-37FFCP PHASE1:Hg19::chr4:90332316..90332323,+#_dbb80e3c8bd5c7589c86a0374026dcd1p@chr4:90332316..90332323, +
2.16e-37FFCP PHASE2:Hg19::chr4:90332316..90332323,+#_dbb80e3c8bd5c7589c86a0374026dcd1p@chr4:90332316..90332323, +
2.6e-36FFCP PHASE1:Hg19::chr5:81654563..81654582,+#_54c1a56bc87633d7352a2a1f224139f8p@chr5:81654563..81654582, +
2.6e-36FFCP PHASE2:Hg19::chr5:81654563..81654582,+#_54c1a56bc87633d7352a2a1f224139f8p@chr5:81654563..81654582, +
9.43e-34FFCP PHASE1:Hg19::chr16:88278862..88278869,-#_53ccd36cc00405e1e63a487260060daep@chr16:88278862..88278869, -
9.43e-34FFCP PHASE2:Hg19::chr16:88278862..88278869,-#_53ccd36cc00405e1e63a487260060daep@chr16:88278862..88278869, -
1.17e-32FFCP PHASE2:Hg19::chr4:118247051..118247056,+#_940dceebc0f04371c04318561c02da31p@chr4:118247051..118247056, +
1.17e-32FFCP PHASE1:Hg19::chr4:118247051..118247056,+#_940dceebc0f04371c04318561c02da31p@chr4:118247051..118247056, +
2.36e-32FFCP PHASE1:Hg19::chr1:9262795..9262800,-#_0e8b6d47f8abc38c6be84173ebef9932p3@ENST00000437157
2.36e-32FFCP PHASE2:Hg19::chr1:9262795..9262800,-#_0e8b6d47f8abc38c6be84173ebef9932p3@ENST00000437157
2.85e-32FFCP PHASE2:Hg19::chr2:113981834..113981850,-#_7e413846bb78c50e2a0c2ec3d1c25418p@chr2:113981834..113981850, -
2.85e-32FFCP PHASE1:Hg19::chr2:113981834..113981850,-#_7e413846bb78c50e2a0c2ec3d1c25418p@chr2:113981834..113981850, -
7.1e-31FFCP PHASE1:Hg19::chr1:98206661..98206672,-#_985deec7b70b2856341d751ed2f4afb6p@chr1:98206661..98206672, -
7.1e-31FFCP PHASE2:Hg19::chr1:98206661..98206672,-#_985deec7b70b2856341d751ed2f4afb6p@chr1:98206661..98206672, -
7.55e-31FFCP PHASE1:Hg19::chr6:75178505..75178516,+#_cd721ff87d85f53bfd0ef5a79b5be82cp@chr6:75178505..75178516, +
7.55e-31FFCP PHASE2:Hg19::chr6:75178505..75178516,+#_cd721ff87d85f53bfd0ef5a79b5be82cp@chr6:75178505..75178516, +
1.02e-30FFCP PHASE1:Hg19::chr3:45152138..45152151,-#_7c6cde6aea0dec56386b9f397eaaca6dp5@CDCP1
1.02e-30FFCP PHASE2:Hg19::chr3:45152138..45152151,-#_7c6cde6aea0dec56386b9f397eaaca6dp5@CDCP1
5.44e-30FFCP PHASE1:Hg19::chr18:25694851..25694855,-#_54cb62faab00510262fa8e5e0b0722dfp@chr18:25694851..25694855, -
5.44e-30FFCP PHASE2:Hg19::chr18:25694851..25694855,-#_54cb62faab00510262fa8e5e0b0722dfp@chr18:25694851..25694855, -
2.95e-29FFCP PHASE2:Hg19::chr5:81654586..81654599,+#_3310520a06c591b281eb74a3397abb38p@chr5:81654586..81654599, +
2.95e-29FFCP PHASE1:Hg19::chr5:81654586..81654599,+#_3310520a06c591b281eb74a3397abb38p@chr5:81654586..81654599, +
6.21e-29FFCP PHASE1:Hg19::chr14:62024238..62024249,+#_b33afc04f887b6e5e2a98b8169db8f0cp@chr14:62024238..62024249, +
6.21e-29FFCP PHASE2:Hg19::chr14:62024238..62024249,+#_b33afc04f887b6e5e2a98b8169db8f0cp@chr14:62024238..62024249, +
2.34e-28FFCP PHASE2:Hg19::chr9:6257179..6257191,+#_ac6a17fdb2701d90ca583b9b5206a3dep@chr9:6257179..6257191, +
2.34e-28FFCP PHASE1:Hg19::chr9:6257179..6257191,+#_ac6a17fdb2701d90ca583b9b5206a3dep@chr9:6257179..6257191, +
8.67e-28FFCP PHASE2:Hg19::chr18:53169326..53169330,-#_779a6c9d7502870f005b80cc41e696dap@chr18:53169326..53169330, -
8.67e-28FFCP PHASE1:Hg19::chr18:53169326..53169330,-#_779a6c9d7502870f005b80cc41e696dap@chr18:53169326..53169330, -
9.15e-27FFCP PHASE2:Hg19::chr4:167068286..167068320,+#_97390105927c3217380a1d12a6f11650p@chr4:167068286..167068320, +
9.15e-27FFCP PHASE1:Hg19::chr4:167068286..167068320,+#_97390105927c3217380a1d12a6f11650p@chr4:167068286..167068320, +
1.8e-26FFCP PHASE1:Hg19::chr1:222079924..222079927,-#_e983871dbdb515a88aff51780d9861f9p@chr1:222079924..222079927, -
1.8e-26FFCP PHASE2:Hg19::chr1:222079924..222079927,-#_e983871dbdb515a88aff51780d9861f9p@chr1:222079924..222079927, -
3.38e-26FFCP PHASE2:Hg19::chr4:38143865..38143904,-#_1cd310de5e79e7bd34929a60c17918c5p@chr4:38143865..38143904, -
3.38e-26FFCP PHASE1:Hg19::chr4:38143865..38143904,-#_1cd310de5e79e7bd34929a60c17918c5p@chr4:38143865..38143904, -
3.9e-25FFCP PHASE1:Hg19::chr6:14671928..14671958,+#_1fad1663c6541a4d4d9e629288c624cfp@chr6:14671928..14671958, +
3.9e-25FFCP PHASE2:Hg19::chr6:14671928..14671958,+#_1fad1663c6541a4d4d9e629288c624cfp@chr6:14671928..14671958, +
5.11e-25FFCP PHASE2:Hg19::chr2:113982635..113982648,-#_e34c79546954b154d69d45fe29d9c8bfp8@PAX8
5.11e-25FFCP PHASE1:Hg19::chr2:113982635..113982648,-#_e34c79546954b154d69d45fe29d9c8bfp8@PAX8
4.16e-24FFCP PHASE1:Hg19::chr6:18497083..18497107,+#_006ded4050deb1879bb6973813a4b73ep@chr6:18497083..18497107, +
4.16e-24FFCP PHASE2:Hg19::chr6:18497083..18497107,+#_006ded4050deb1879bb6973813a4b73ep@chr6:18497083..18497107, +
6.49e-24FFCP PHASE1:Hg19::chr5:64469134..64469150,-#_3f5ef58bb011f799cc659f27ecb25ef1p@chr5:64469134..64469150, -
6.49e-24FFCP PHASE2:Hg19::chr5:64469134..64469150,-#_3f5ef58bb011f799cc659f27ecb25ef1p@chr5:64469134..64469150, -
5.98e-23FFCP PHASE1:Hg19::chr8:101588316..101588317,-#_c1c08978fffe7b7a257b28d4f9308307p1@AK127517
5.98e-23FFCP PHASE2:Hg19::chr7:20257461..20257472,-#_c1c08978fffe7b7a257b28d4f9308307p9@MACC1
5.98e-23FFCP PHASE1:Hg19::chr6:42724431..42724435,+#_c1c08978fffe7b7a257b28d4f9308307p@chr6:42724431..42724435, +
5.98e-23FFCP PHASE2:Hg19::chr8:101588316..101588317,-#_c1c08978fffe7b7a257b28d4f9308307p1@AK127517
5.98e-23FFCP PHASE2:Hg19::chr6:42724431..42724435,+#_c1c08978fffe7b7a257b28d4f9308307p@chr6:42724431..42724435, +
5.98e-23FFCP PHASE1:Hg19::chr6:18496965..18496969,+#_c1c08978fffe7b7a257b28d4f9308307p@chr6:18496965..18496969, +
5.98e-23FFCP PHASE1:Hg19::chr16:75511082..75511090,+#_c1c08978fffe7b7a257b28d4f9308307p@chr16:75511082..75511090, +
5.98e-23FFCP PHASE2:Hg19::chr16:75511082..75511090,+#_c1c08978fffe7b7a257b28d4f9308307p@chr16:75511082..75511090, +
5.98e-23FFCP PHASE1:Hg19::chr7:20257461..20257472,-#_c1c08978fffe7b7a257b28d4f9308307p9@MACC1
5.98e-23FFCP PHASE2:Hg19::chr6:18496965..18496969,+#_c1c08978fffe7b7a257b28d4f9308307p@chr6:18496965..18496969, +
1.52e-22FFCP PHASE2:Hg19::chr5:73109313..73109326,+#_1ed61ce3ab996e719b066969f00676e3p4@RGNEF
1.52e-22FFCP PHASE1:Hg19::chr5:73109313..73109326,+#_1ed61ce3ab996e719b066969f00676e3p4@RGNEF
5.58e-22FFCP PHASE2:Hg19::chr2:162931138..162931149,-#_b8f20b1e79db541619970578b00e7963p14@DPP4
5.58e-22FFCP PHASE1:Hg19::chr2:162931138..162931149,-#_b8f20b1e79db541619970578b00e7963p14@DPP4
5.86e-22FFCP PHASE1:Hg19::chr12:127762515..127762539,-#_a03f7e6a67774325c7b99f0d84eab1c1p@chr12:127762515..127762539, -
5.86e-22FFCP PHASE2:Hg19::chr12:127762515..127762539,-#_a03f7e6a67774325c7b99f0d84eab1c1p@chr12:127762515..127762539, -
7.34e-22FFCP PHASE2:Hg19::chr9:83566735..83566738,+#_c8b1d74a0653d441ba47d8cf0cae86f0p@chr9:83566735..83566738, +
7.34e-22FFCP PHASE1:Hg19::chr9:83566735..83566738,+#_c8b1d74a0653d441ba47d8cf0cae86f0p@chr9:83566735..83566738, +
8.77e-22FFCP PHASE1:Hg19::chr20:6034672..6034714,-#_255bafeacc302337f3d90ba6c26d010ap2@LRRN4
8.77e-22FFCP PHASE2:Hg19::chr20:6034672..6034714,-#_255bafeacc302337f3d90ba6c26d010ap2@LRRN4
9.15e-22FFCP PHASE1:Hg19::chr13:38083855..38083873,+#_3ad3498b4aa9f29d5194889e794faaf0p@chr13:38083855..38083873, +
9.15e-22FFCP PHASE2:Hg19::chr13:38083855..38083873,+#_3ad3498b4aa9f29d5194889e794faaf0p@chr13:38083855..38083873, +
4.75e-21FFCP PHASE1:Hg19::chr2:113982348..113982371,-#_581c1201a8968c0b6b251c0f94887e9cp@chr2:113982348..113982371, -
4.75e-21FFCP PHASE2:Hg19::chr2:113982348..113982371,-#_581c1201a8968c0b6b251c0f94887e9cp@chr2:113982348..113982371, -
6.42e-21FFCP PHASE1:Hg19::chr3:197639921..197639934,-#_14592584b9e0ddb55281e3ad552ef27dp6@IQCG
6.42e-21FFCP PHASE2:Hg19::chr3:197639921..197639934,-#_14592584b9e0ddb55281e3ad552ef27dp6@IQCG
6.46e-21FFCP PHASE2:Hg19::chr10:28367236..28367266,+#_b547d83ec335a9fe0cb78f2c75d44466p@chr10:28367236..28367266, +
6.46e-21FFCP PHASE1:Hg19::chr10:28367236..28367266,+#_b547d83ec335a9fe0cb78f2c75d44466p@chr10:28367236..28367266, +
1.04e-20FFCP PHASE2:Hg19::chr22:30640029..30640037,-#_fff9cfb0b1812624affcee6f7c36ce2cp@chr22:30640029..30640037, -
1.04e-20FFCP PHASE1:Hg19::chr22:30640029..30640037,-#_fff9cfb0b1812624affcee6f7c36ce2cp@chr22:30640029..30640037, -
1.48e-20FFCP PHASE2:Hg19::chr22:28901919..28901924,+#_551c04fdfe5784f4b64d3b3bcd151648p@chr22:28901919..28901924, +
1.48e-20FFCP PHASE1:Hg19::chr22:28901919..28901924,+#_551c04fdfe5784f4b64d3b3bcd151648p@chr22:28901919..28901924, +
1.48e-20FFCP PHASE1:Hg19::chr7:17409475..17409478,-#_551c04fdfe5784f4b64d3b3bcd151648p@chr7:17409475..17409478, -
1.48e-20FFCP PHASE2:Hg19::chr7:17409475..17409478,-#_551c04fdfe5784f4b64d3b3bcd151648p@chr7:17409475..17409478, -
1.54e-20FFCP PHASE1:Hg19::chr17:57841314..57841323,-#_ffd52a28c533cce70db9b427b308c757p@chr17:57841314..57841323, -
1.54e-20FFCP PHASE2:Hg19::chr17:57841314..57841323,-#_ffd52a28c533cce70db9b427b308c757p@chr17:57841314..57841323, -
3.67e-20FFCP PHASE1:Hg19::chr9:6257148..6257157,+#_a0e5b333b8f530195da384b15a7d370dp@chr9:6257148..6257157, +
3.67e-20FFCP PHASE2:Hg19::chr9:6257148..6257157,+#_a0e5b333b8f530195da384b15a7d370dp@chr9:6257148..6257157, +
3.9e-20FFCP PHASE1:Hg19::chr16:34980938..34980966,+#_8d91daa6d2bd3f9dc74014daf373363ap1@FLJ26245
3.9e-20FFCP PHASE2:Hg19::chr16:34980938..34980966,+#_8d91daa6d2bd3f9dc74014daf373363ap1@FLJ26245
3.9e-20FFCP PHASE1:Hg19::chr16:34980881..34980902,+#_8d91daa6d2bd3f9dc74014daf373363ap1@ENST00000516136
3.9e-20FFCP PHASE2:Hg19::chr16:34980881..34980902,+#_8d91daa6d2bd3f9dc74014daf373363ap1@ENST00000516136
4.2e-20FFCP PHASE1:Hg19::chr9:118435168..118435186,+#_d6c528086af65bcaeb1dca79aabd8814p@chr9:118435168..118435186, +
4.2e-20FFCP PHASE2:Hg19::chr9:118435168..118435186,+#_d6c528086af65bcaeb1dca79aabd8814p@chr9:118435168..118435186, +
7.09e-20FFCP PHASE2:Hg19::chr2:113990903..113990907,-#_f10639f9d5e21d8d1ccdc58e035f023cp@chr2:113990903..113990907, -
7.09e-20FFCP PHASE1:Hg19::chr2:113990903..113990907,-#_f10639f9d5e21d8d1ccdc58e035f023cp@chr2:113990903..113990907, -
8.46e-20FFCP PHASE1:Hg19::chr10:4284210..4284228,+#_d7b4e0bc463659e25c928d8caac36089p@chr10:4284210..4284228, +
8.46e-20FFCP PHASE2:Hg19::chr10:4284210..4284228,+#_d7b4e0bc463659e25c928d8caac36089p@chr10:4284210..4284228, +
1.04e-19FFCP PHASE1:Hg19::chr8:38008450..38008459,-#_18c26edd78b6a6571bb0b3ebe64b0bd0p4@STAR
1.04e-19FFCP PHASE2:Hg19::chr8:38008450..38008459,-#_18c26edd78b6a6571bb0b3ebe64b0bd0p4@STAR
1.89e-19FFCP PHASE1:Hg19::chr9:5621474..5621483,-#_3ef6e4e2df63678cac4ab4cbb892a383p@chr9:5621474..5621483, -
1.89e-19FFCP PHASE2:Hg19::chr9:5621474..5621483,-#_3ef6e4e2df63678cac4ab4cbb892a383p@chr9:5621474..5621483, -
2.1e-19FFCP PHASE1:Hg19::chr2:114036488..114036504,-#_b937716e2c49722e41d52bff5bdc6483p1@PAX8
2.1e-19FFCP PHASE2:Hg19::chr2:114036488..114036504,-#_b937716e2c49722e41d52bff5bdc6483p1@PAX8
4.93e-19FFCP PHASE2:Hg19::chr2:1048832..1048860,+#_3ceae0fdac1ac5a234af942d6847fa9ap@chr2:1048832..1048860, +
4.93e-19FFCP PHASE1:Hg19::chr2:1048832..1048860,+#_3ceae0fdac1ac5a234af942d6847fa9ap@chr2:1048832..1048860, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=DOID:120&oldid=3275621"