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{{DOID
{{DOID
|id=DOID:178
|alt_id=DOID:45
|name=vascular disease
|namespace=disease_ontology
|def=
|xref=MSH:D014652;;NCI:C35117;;SNOMEDCT_2010_1_31:27550009;;UMLS_CUI:C0042373
|is_a=DOID:1287
|synonym="internal elastic lamina" EXACT []
|comment=
|comment=
|alt_id=DOID:45
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:178
|is_a=DOID:1287
|is_obsolete=
|located_in=
|located_in=
|name=vascular disease
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym="internal elastic lamina" EXACT []
|union_of=
|xref=MSH:D014652;;NCI:C35117;;SNOMEDCT_2010_1_31:27550009;;UMLS_CUI:C0042373
}}
}}

Latest revision as of 16:49, 12 September 2014

Name:vascular disease
Namespace:FANTOM
Xrefs:
links:

MSH:D014652
NCI:C35117
SNOMEDCT_2010_1_31:27550009

UMLS_CUI:C0042373
Synonyms: "internal elastic lamina" EXACT []
Alt_id: DOID:45

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1287(cardiovascular system disease)



Children


is a:DOID:0050828 (artery disease),DOID:326 (ischemia)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 10050-101G5 (heart, adult, diseased post-infarction, donor1)

Mouse (Mus musculus)

  • 10050-101G5 (heart, adult, diseased post-infarction, donor1)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:178 (vascular disease), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr4:74508559..74508597,+#_22621425bcd48d3f43703e93031c690ap@chr4:74508559..74508597, +
5.42e-195FFCP PHASE1:Hg19::chr20:36776599..36776606,-#_22621425bcd48d3f43703e93031c690ap@chr20:36776599..36776606, -
5.42e-195FFCP PHASE2:Hg19::chr20:36776599..36776606,-#_22621425bcd48d3f43703e93031c690ap@chr20:36776599..36776606, -
5.42e-195FFCP PHASE2:Hg19::chr4:74508559..74508597,+#_22621425bcd48d3f43703e93031c690ap@chr4:74508559..74508597, +
2.55e-98FFCP PHASE2:Hg19::chr16:847096..847103,-#_20d665a658caf100af811b8f46a11709p@chr16:847096..847103, -
2.55e-98FFCP PHASE1:Hg19::chr16:847096..847103,-#_20d665a658caf100af811b8f46a11709p@chr16:847096..847103, -
1.23e-66FFCP PHASE2:Hg19::chr11:118829078..118829088,+#_bda155a12579134d5db53928c5845341p10@UPK2
1.23e-66FFCP PHASE1:Hg19::chr11:118829078..118829088,+#_bda155a12579134d5db53928c5845341p10@UPK2
2.39e-66FFCP PHASE2:Hg19::chr15:71446812..71446820,+#_5c84f1c6b9b216a0ca0fe6903210eea7p@chr15:71446812..71446820, +
2.39e-66FFCP PHASE1:Hg19::chr15:71446812..71446820,+#_5c84f1c6b9b216a0ca0fe6903210eea7p@chr15:71446812..71446820, +
2.39e-66FFCP PHASE2:Hg19::chr10:43871125..43871134,+#_5c84f1c6b9b216a0ca0fe6903210eea7p@chr10:43871125..43871134, +
2.39e-66FFCP PHASE1:Hg19::chr2:40656537..40656548,-#_5c84f1c6b9b216a0ca0fe6903210eea7p30@SLC8A1
2.39e-66FFCP PHASE2:Hg19::chr1:12030696..12030711,+#_5c84f1c6b9b216a0ca0fe6903210eea7p@chr1:12030696..12030711, +
2.39e-66FFCP PHASE1:Hg19::chr1:12030696..12030711,+#_5c84f1c6b9b216a0ca0fe6903210eea7p@chr1:12030696..12030711, +
2.39e-66FFCP PHASE2:Hg19::chr2:40656537..40656548,-#_5c84f1c6b9b216a0ca0fe6903210eea7p30@SLC8A1
2.39e-66FFCP PHASE1:Hg19::chr10:43871125..43871134,+#_5c84f1c6b9b216a0ca0fe6903210eea7p@chr10:43871125..43871134, +
4.66e-66FFCP PHASE1:Hg19::chr1:202431911..202431922,+#_ef9008150bc7f956744048817dd61e7fp12@PPP1R12B
4.66e-66FFCP PHASE1:Hg19::chr14:23863067..23863074,+#_ef9008150bc7f956744048817dd61e7fp@chr14:23863067..23863074, +
4.66e-66FFCP PHASE2:Hg19::chr1:202431911..202431922,+#_ef9008150bc7f956744048817dd61e7fp12@PPP1R12B
4.66e-66FFCP PHASE1:Hg19::chr14:23863078..23863082,+#_ef9008150bc7f956744048817dd61e7fp@chr14:23863078..23863082, +
4.66e-66FFCP PHASE1:Hg19::chr1:202431836..202431849,+#_ef9008150bc7f956744048817dd61e7fp18@PPP1R12B
4.66e-66FFCP PHASE2:Hg19::chr14:23863067..23863074,+#_ef9008150bc7f956744048817dd61e7fp@chr14:23863067..23863074, +
4.66e-66FFCP PHASE2:Hg19::chr1:202431836..202431849,+#_ef9008150bc7f956744048817dd61e7fp18@PPP1R12B
4.66e-66FFCP PHASE2:Hg19::chr14:23863078..23863082,+#_ef9008150bc7f956744048817dd61e7fp@chr14:23863078..23863082, +
1.46e-50FFCP PHASE2:Hg19::chr1:16340619..16340636,+#_033f32412c13e0853d92515969774164p@chr1:16340619..16340636, +
1.46e-50FFCP PHASE1:Hg19::chr1:16340619..16340636,+#_033f32412c13e0853d92515969774164p@chr1:16340619..16340636, +
1.46e-50FFCP PHASE2:Hg19::chr19:50216889..50216897,-#_033f32412c13e0853d92515969774164p@chr19:50216889..50216897, -
1.46e-50FFCP PHASE1:Hg19::chr19:50216889..50216897,-#_033f32412c13e0853d92515969774164p@chr19:50216889..50216897, -
2.42e-50FFCP PHASE2:Hg19::chr11:118829041..118829050,+#_5cf554a9c4bba825ba0d555dc2f6523ep9@UPK2
2.42e-50FFCP PHASE1:Hg19::chr4:169995417..169995430,-#_5cf554a9c4bba825ba0d555dc2f6523ep@chr4:169995417..169995430, -
2.42e-50FFCP PHASE1:Hg19::chr15:44172060..44172067,-#_5cf554a9c4bba825ba0d555dc2f6523ep@chr15:44172060..44172067, -
2.42e-50FFCP PHASE1:Hg19::chr7:44733756..44733765,+#_5cf554a9c4bba825ba0d555dc2f6523ep@chr7:44733756..44733765, +
2.42e-50FFCP PHASE2:Hg19::chr15:44172060..44172067,-#_5cf554a9c4bba825ba0d555dc2f6523ep@chr15:44172060..44172067, -
2.42e-50FFCP PHASE1:Hg19::chr11:118829041..118829050,+#_5cf554a9c4bba825ba0d555dc2f6523ep9@UPK2
2.42e-50FFCP PHASE2:Hg19::chr7:44733756..44733765,+#_5cf554a9c4bba825ba0d555dc2f6523ep@chr7:44733756..44733765, +
2.42e-50FFCP PHASE2:Hg19::chr16:46791398..46791405,-#_5cf554a9c4bba825ba0d555dc2f6523ep@chr16:46791398..46791405, -
2.42e-50FFCP PHASE2:Hg19::chr4:169995417..169995430,-#_5cf554a9c4bba825ba0d555dc2f6523ep@chr4:169995417..169995430, -
2.42e-50FFCP PHASE1:Hg19::chr16:46791398..46791405,-#_5cf554a9c4bba825ba0d555dc2f6523ep@chr16:46791398..46791405, -
3.99e-50FFCP PHASE1:Hg19::chr14:23862916..23862925,-#_981b891a03baf149df85b0168191e66fp@chr14:23862916..23862925, -
3.99e-50FFCP PHASE2:Hg19::chr20:35973066..35973071,+#_981b891a03baf149df85b0168191e66fp25@SRC
3.99e-50FFCP PHASE1:Hg19::chr20:35973066..35973071,+#_981b891a03baf149df85b0168191e66fp25@SRC
3.99e-50FFCP PHASE2:Hg19::chr2:220495902..220495903,+#_981b891a03baf149df85b0168191e66fp25@SLC4A3
3.99e-50FFCP PHASE1:Hg19::chr7:100454665..100454679,+#_981b891a03baf149df85b0168191e66fp11@SLC12A9
3.99e-50FFCP PHASE1:Hg19::chr6:36812270..36812277,-#_981b891a03baf149df85b0168191e66fp@chr6:36812270..36812277, -
3.99e-50FFCP PHASE2:Hg19::chr14:23862916..23862925,-#_981b891a03baf149df85b0168191e66fp@chr14:23862916..23862925, -
3.99e-50FFCP PHASE1:Hg19::chr14:23862685..23862696,+#_981b891a03baf149df85b0168191e66fp@chr14:23862685..23862696, +
3.99e-50FFCP PHASE2:Hg19::chr7:100454665..100454679,+#_981b891a03baf149df85b0168191e66fp11@SLC12A9
3.99e-50FFCP PHASE2:Hg19::chr6:36812270..36812277,-#_981b891a03baf149df85b0168191e66fp@chr6:36812270..36812277, -
3.99e-50FFCP PHASE1:Hg19::chr8:66701339..66701344,-#_981b891a03baf149df85b0168191e66fp29@PDE7A
3.99e-50FFCP PHASE2:Hg19::chr14:23862685..23862696,+#_981b891a03baf149df85b0168191e66fp@chr14:23862685..23862696, +
3.99e-50FFCP PHASE1:Hg19::chr1:202431859..202431868,+#_981b891a03baf149df85b0168191e66fp20@PPP1R12B
3.99e-50FFCP PHASE1:Hg19::chr2:220495902..220495903,+#_981b891a03baf149df85b0168191e66fp25@SLC4A3
3.99e-50FFCP PHASE2:Hg19::chr8:66701339..66701344,-#_981b891a03baf149df85b0168191e66fp29@PDE7A
3.99e-50FFCP PHASE2:Hg19::chr1:202431859..202431868,+#_981b891a03baf149df85b0168191e66fp20@PPP1R12B
6.58e-50FFCP PHASE1:Hg19::chr14:23862659..23862665,-#_61bd103f837d182049be540592d3fc52p@chr14:23862659..23862665, -
6.58e-50FFCP PHASE2:Hg19::chr14:23862659..23862665,-#_61bd103f837d182049be540592d3fc52p@chr14:23862659..23862665, -
6.58e-50FFCP PHASE1:Hg19::chr14:23862577..23862585,-#_61bd103f837d182049be540592d3fc52p5@MYH6
6.58e-50FFCP PHASE2:Hg19::chr14:23876391..23876406,-#_61bd103f837d182049be540592d3fc52p4@MYH6
6.58e-50FFCP PHASE2:Hg19::chr14:23863407..23863418,-#_61bd103f837d182049be540592d3fc52p@chr14:23863407..23863418, -
6.58e-50FFCP PHASE1:Hg19::chr14:23876391..23876406,-#_61bd103f837d182049be540592d3fc52p4@MYH6
6.58e-50FFCP PHASE2:Hg19::chr14:23862577..23862585,-#_61bd103f837d182049be540592d3fc52p5@MYH6
6.58e-50FFCP PHASE1:Hg19::chr14:23863407..23863418,-#_61bd103f837d182049be540592d3fc52p@chr14:23863407..23863418, -
9.91e-41FFCP PHASE2:Hg19::chr14:23865605..23865611,-#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr14:23865605..23865611, -
9.91e-41FFCP PHASE1:Hg19::chr14:23865605..23865611,-#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr14:23865605..23865611, -
9.91e-41FFCP PHASE1:Hg19::chr21:19117606..19117619,+#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr21:19117606..19117619, +
9.91e-41FFCP PHASE2:Hg19::chr21:19117606..19117619,+#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr21:19117606..19117619, +
9.91e-41FFCP PHASE1:Hg19::chr11:2676900..2676903,-#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr11:2676900..2676903, -
9.91e-41FFCP PHASE2:Hg19::chr1:6063096..6063104,+#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr1:6063096..6063104, +
9.91e-41FFCP PHASE1:Hg19::chr1:6063096..6063104,+#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr1:6063096..6063104, +
9.91e-41FFCP PHASE2:Hg19::chr11:2676900..2676903,-#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr11:2676900..2676903, -
1.48e-40FFCP PHASE1:Hg19::chr16:46791436..46791443,-#_9c00f43d315f1bc6317882ed859d5688p@chr16:46791436..46791443, -
1.48e-40FFCP PHASE2:Hg19::chr1:202432165..202432174,+#_9c00f43d315f1bc6317882ed859d5688p30@PPP1R12B
1.48e-40FFCP PHASE2:Hg19::chr2:24585157..24585182,-#_9c00f43d315f1bc6317882ed859d5688p@chr2:24585157..24585182, -
1.48e-40FFCP PHASE1:Hg19::chr2:106054837..106054867,+#_9c00f43d315f1bc6317882ed859d5688p@chr2:106054837..106054867, +
1.48e-40FFCP PHASE2:Hg19::chr14:23863529..23863540,-#_9c00f43d315f1bc6317882ed859d5688p@chr14:23863529..23863540, -
1.48e-40FFCP PHASE1:Hg19::chr12:825768..825781,-#_9c00f43d315f1bc6317882ed859d5688p@chr12:825768..825781, -
1.48e-40FFCP PHASE1:Hg19::chr14:23862929..23862940,-#_9c00f43d315f1bc6317882ed859d5688p@chr14:23862929..23862940, -
1.48e-40FFCP PHASE2:Hg19::chr14:23862653..23862669,+#_9c00f43d315f1bc6317882ed859d5688p@chr14:23862653..23862669, +
1.48e-40FFCP PHASE1:Hg19::chr14:23863529..23863540,-#_9c00f43d315f1bc6317882ed859d5688p@chr14:23863529..23863540, -
1.48e-40FFCP PHASE2:Hg19::chr12:825768..825781,-#_9c00f43d315f1bc6317882ed859d5688p@chr12:825768..825781, -
1.48e-40FFCP PHASE2:Hg19::chr2:106054837..106054867,+#_9c00f43d315f1bc6317882ed859d5688p@chr2:106054837..106054867, +
1.48e-40FFCP PHASE2:Hg19::chr14:23862929..23862940,-#_9c00f43d315f1bc6317882ed859d5688p@chr14:23862929..23862940, -
1.48e-40FFCP PHASE1:Hg19::chr2:24585157..24585182,-#_9c00f43d315f1bc6317882ed859d5688p@chr2:24585157..24585182, -
1.48e-40FFCP PHASE2:Hg19::chr14:23865587..23865596,-#_9c00f43d315f1bc6317882ed859d5688p@chr14:23865587..23865596, -
1.48e-40FFCP PHASE1:Hg19::chr1:202432165..202432174,+#_9c00f43d315f1bc6317882ed859d5688p30@PPP1R12B
1.48e-40FFCP PHASE1:Hg19::chr14:23865587..23865596,-#_9c00f43d315f1bc6317882ed859d5688p@chr14:23865587..23865596, -
1.48e-40FFCP PHASE1:Hg19::chr14:23862653..23862669,+#_9c00f43d315f1bc6317882ed859d5688p@chr14:23862653..23862669, +
1.48e-40FFCP PHASE2:Hg19::chr16:46791436..46791443,-#_9c00f43d315f1bc6317882ed859d5688p@chr16:46791436..46791443, -
2.21e-40FFCP PHASE2:Hg19::chr14:23857002..23857008,-#_309d87b96b5a7805c312edb22d660ca4p@chr14:23857002..23857008, -
2.21e-40FFCP PHASE1:Hg19::chr11:3838082..3838123,+#_309d87b96b5a7805c312edb22d660ca4p9@PGAP2
2.21e-40FFCP PHASE2:Hg19::chr12:20425310..20425314,+#_309d87b96b5a7805c312edb22d660ca4p@chr12:20425310..20425314, +
2.21e-40FFCP PHASE2:Hg19::chr2:220491920..220491931,+#_309d87b96b5a7805c312edb22d660ca4p15@SLC4A3
2.21e-40FFCP PHASE2:Hg19::chr5:148803658..148803668,+#_309d87b96b5a7805c312edb22d660ca4p@chr5:148803658..148803668, +
2.21e-40FFCP PHASE1:Hg19::chr4:186598476..186598485,+#_309d87b96b5a7805c312edb22d660ca4p@chr4:186598476..186598485, +
2.21e-40FFCP PHASE2:Hg19::chr11:3838082..3838123,+#_309d87b96b5a7805c312edb22d660ca4p9@PGAP2
2.21e-40FFCP PHASE1:Hg19::chr2:218843356..218843370,-#_309d87b96b5a7805c312edb22d660ca4p@chr2:218843356..218843370, -
2.21e-40FFCP PHASE1:Hg19::chr12:20425310..20425314,+#_309d87b96b5a7805c312edb22d660ca4p@chr12:20425310..20425314, +
2.21e-40FFCP PHASE1:Hg19::chr14:23856854..23856864,-#_309d87b96b5a7805c312edb22d660ca4p@chr14:23856854..23856864, -
2.21e-40FFCP PHASE2:Hg19::chr17:25568716..25568726,-#_309d87b96b5a7805c312edb22d660ca4p@chr17:25568716..25568726, -
2.21e-40FFCP PHASE2:Hg19::chr4:186598476..186598485,+#_309d87b96b5a7805c312edb22d660ca4p@chr4:186598476..186598485, +

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