DOID:3371: Difference between revisions
From FANTOM5_SSTAR
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|id=DOID:3371
|name=chondrosarcoma
|namespace=
|def=
|xref=
|is_a=DOID:201
|synonym="chondrosarcoma" EXACT [NCI2004_11_17:C2946];;"chondrosarcoma (morphologic ab...") |
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{{DOID | {{DOID | ||
|alt_id=DOID:3370 | |alt_id=DOID:3370 | ||
| | |comment=OMIM mapping confirmed by DO. [SN]. | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=DOID:3371 | |||
|is_a=DOID:201 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=chondrosarcoma | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |||
|subset= | |||
|synonym="chondrosarcoma" EXACT [NCI2004_11_17:C2946];;"chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:14990007];;"chondrosarcoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189886003];;"chondrosarcoma of bone" EXACT [SNOMEDCT_2005_07_31:134336003];;"primary chondrosarcoma of bone" EXACT [];;"primary chondrosarcoma of the bone" EXACT [NCI2004_11_17:C7155] | |||
|union_of= | |||
|xref=MSH:D002813;;NCI:C2946;;OMIM:215300;;SNOMEDCT_2010_1_31:134336003;;SNOMEDCT_2010_1_31:14990007;;SNOMEDCT_2010_1_31:189886003;;SNOMEDCT_2010_1_31:443520009;;UMLS_CUI:C0008479;;UMLS_CUI:C1335473 | |||
}} | }} |
Latest revision as of 16:50, 12 September 2014
Name: | chondrosarcoma | |
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Namespace: | FANTOM | |
Xrefs: |
| |
Synonyms: |
"chondrosarcoma" EXACT [NCI2004_11_17:C2946] "chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:14990007] "chondrosarcoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189886003] "chondrosarcoma of bone" EXACT [SNOMEDCT_2005_07_31:134336003] "primary chondrosarcoma of bone" EXACT [] "primary chondrosarcoma of the bone" EXACT [NCI2004_11_17:C7155] | |
Comments: | OMIM mapping confirmed by DO. [SN]. | |
Alt_id: | DOID:3370 |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:201(connective tissue cancer) |
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Children
is a: | FF:10720-109I9 (),DOID:4549 (extraosseous chondrosarcoma),DOID:5861 (myxoid chondrosarcoma) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10720-109I9
Mouse (Mus musculus)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10720-109I9
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3371 (chondrosarcoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
5.42e-195 | FFCP PHASE2:Hg19::chr6:152792957..152792960,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr6:152792957..152792960, - |
5.42e-195 | FFCP PHASE2:Hg19::chr14:83319766..83319776,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr14:83319766..83319776, - |
5.42e-195 | FFCP PHASE1:Hg19::chr9:79634044..79634053,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr9:79634044..79634053, - |
5.42e-195 | FFCP PHASE2:Hg19::chr9:12848028..12848033,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr9:12848028..12848033, - |
5.42e-195 | FFCP PHASE2:Hg19::chr3:177555440..177555446,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:177555440..177555446, - |
5.42e-195 | FFCP PHASE2:Hg19::chr1:197886803..197886812,+#_a94794a00b78c9028f3bf3b1af3efa58 | p7@LHX9 |
5.42e-195 | FFCP PHASE2:Hg19::chr19:56047661..56047668,-#_a94794a00b78c9028f3bf3b1af3efa58 | p4@SBK2 |
5.42e-195 | FFCP PHASE2:Hg19::chr18:22251696..22251702,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr18:22251696..22251702, - |
5.42e-195 | FFCP PHASE1:Hg19::chr2:188420455..188420469,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr2:188420455..188420469, + |
5.42e-195 | FFCP PHASE2:Hg19::chr18:74961699..74961708,+#_a94794a00b78c9028f3bf3b1af3efa58 | p5@GALR1 |
5.42e-195 | FFCP PHASE2:Hg19::chr3:1577559..1577577,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:1577559..1577577, - |
5.42e-195 | FFCP PHASE1:Hg19::chr18:74535969..74535980,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr18:74535969..74535980, - |
5.42e-195 | FFCP PHASE2:Hg19::chr2:206927691..206927699,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr2:206927691..206927699, - |
5.42e-195 | FFCP PHASE1:Hg19::chr14:83319766..83319776,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr14:83319766..83319776, - |
5.42e-195 | FFCP PHASE2:Hg19::chr3:2141993..2142006,+#_a94794a00b78c9028f3bf3b1af3efa58 | p6@CNTN4 |
5.42e-195 | FFCP PHASE2:Hg19::chr1:154942376..154942386,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:154942376..154942386, - |
5.42e-195 | FFCP PHASE1:Hg19::chr18:22251681..22251685,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr18:22251681..22251685, - |
5.42e-195 | FFCP PHASE2:Hg19::chr6:152590052..152590068,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr6:152590052..152590068, - |
5.42e-195 | FFCP PHASE2:Hg19::chr2:175614951..175614956,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr2:175614951..175614956, - |
5.42e-195 | FFCP PHASE2:Hg19::chr12:89917192..89917200,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr12:89917192..89917200, - |
5.42e-195 | FFCP PHASE1:Hg19::chr3:2141982..2141990,+#_a94794a00b78c9028f3bf3b1af3efa58 | p16@CNTN4 |
5.42e-195 | FFCP PHASE1:Hg19::chr3:106921055..106921063,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:106921055..106921063, - |
5.42e-195 | FFCP PHASE1:Hg19::chr1:154942216..154942223,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:154942216..154942223, - |
5.42e-195 | FFCP PHASE1:Hg19::chr12:71031310..71031321,-#_a94794a00b78c9028f3bf3b1af3efa58 | p14@PTPRB |
5.42e-195 | FFCP PHASE2:Hg19::chr5:33361438..33361453,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr5:33361438..33361453, - |
5.42e-195 | FFCP PHASE2:Hg19::chr2:190023542..190023552,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr2:190023542..190023552, - |
5.42e-195 | FFCP PHASE2:Hg19::chr10:54786954..54786965,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr10:54786954..54786965, - |
5.42e-195 | FFCP PHASE1:Hg19::chr11:30257128..30257133,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr11:30257128..30257133, - |
5.42e-195 | FFCP PHASE2:Hg19::chr3:2139856..2139863,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:2139856..2139863, + |
5.42e-195 | FFCP PHASE1:Hg19::chr3:1577545..1577547,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:1577545..1577547, - |
5.42e-195 | FFCP PHASE1:Hg19::chr2:206927652..206927658,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr2:206927652..206927658, - |
5.42e-195 | FFCP PHASE2:Hg19::chr6:152589245..152589256,-#_a94794a00b78c9028f3bf3b1af3efa58 | p53@SYNE1 |
5.42e-195 | FFCP PHASE1:Hg19::chr9:18993581..18993586,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr9:18993581..18993586, - |
5.42e-195 | FFCP PHASE2:Hg19::chr14:87689429..87689432,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr14:87689429..87689432, - |
5.42e-195 | FFCP PHASE2:Hg19::chr1:197890538..197890548,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:197890538..197890548, + |
5.42e-195 | FFCP PHASE1:Hg19::chr3:99508248..99508255,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:99508248..99508255, - |
5.42e-195 | FFCP PHASE1:Hg19::chr3:157206082..157206087,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:157206082..157206087, - |
5.42e-195 | FFCP PHASE1:Hg19::chr12:89917192..89917200,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr12:89917192..89917200, - |
5.42e-195 | FFCP PHASE2:Hg19::chr15:96181433..96181441,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr15:96181433..96181441, - |
5.42e-195 | FFCP PHASE1:Hg19::chr12:108955070..108955084,-#_a94794a00b78c9028f3bf3b1af3efa58 | p16@SART3 |
5.42e-195 | FFCP PHASE2:Hg19::chr6:150740842..150740854,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr6:150740842..150740854, + |
5.42e-195 | FFCP PHASE1:Hg19::chr10:33244066..33244083,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr10:33244066..33244083, - |
5.42e-195 | FFCP PHASE1:Hg19::chr1:113250450..113250457,-#_a94794a00b78c9028f3bf3b1af3efa58 | p18@RHOC |
5.42e-195 | FFCP PHASE2:Hg19::chr12:79920595..79920605,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr12:79920595..79920605, - |
5.42e-195 | FFCP PHASE1:Hg19::chr3:2141759..2141771,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:2141759..2141771, - |
5.42e-195 | FFCP PHASE1:Hg19::chr6:150735340..150735361,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr6:150735340..150735361, + |
5.42e-195 | FFCP PHASE1:Hg19::chr4:72885984..72885997,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr4:72885984..72885997, - |
5.42e-195 | FFCP PHASE2:Hg19::chr3:163194047..163194081,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:163194047..163194081, - |
5.42e-195 | FFCP PHASE1:Hg19::chr12:70351971..70351975,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr12:70351971..70351975, + |
5.42e-195 | FFCP PHASE1:Hg19::chr3:127441545..127441550,-#_a94794a00b78c9028f3bf3b1af3efa58 | p58@MGLL |
5.42e-195 | FFCP PHASE1:Hg19::chr14:87689429..87689432,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr14:87689429..87689432, - |
5.42e-195 | FFCP PHASE2:Hg19::chr3:2141785..2141802,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:2141785..2141802, - |
5.42e-195 | FFCP PHASE2:Hg19::chr12:70351934..70351939,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr12:70351934..70351939, + |
5.42e-195 | FFCP PHASE1:Hg19::chr1:197889977..197890013,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:197889977..197890013, + |
5.42e-195 | FFCP PHASE1:Hg19::chr18:22253588..22253590,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr18:22253588..22253590, + |
5.42e-195 | FFCP PHASE1:Hg19::chr15:96181433..96181441,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr15:96181433..96181441, - |
5.42e-195 | FFCP PHASE2:Hg19::chrX:135338397..135338402,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chrX:135338397..135338402, - |
5.42e-195 | FFCP PHASE2:Hg19::chr3:99680705..99680734,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:99680705..99680734, + |
5.42e-195 | FFCP PHASE2:Hg19::chr3:157230599..157230604,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:157230599..157230604, + |
5.42e-195 | FFCP PHASE1:Hg19::chr7:18439523..18439524,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr7:18439523..18439524, + |
5.42e-195 | FFCP PHASE1:Hg19::chr12:79920639..79920642,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr12:79920639..79920642, - |
5.42e-195 | FFCP PHASE2:Hg19::chr10:63700017..63700022,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr10:63700017..63700022, + |
5.42e-195 | FFCP PHASE2:Hg19::chr4:169935479..169935481,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr4:169935479..169935481, - |
5.42e-195 | FFCP PHASE2:Hg19::chr3:2141862..2141887,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:2141862..2141887, - |
5.42e-195 | FFCP PHASE1:Hg19::chr12:46660412..46660420,-#_a94794a00b78c9028f3bf3b1af3efa58 | p38@SLC38A1 |
5.42e-195 | FFCP PHASE1:Hg19::chr6:109702786..109702795,-#_a94794a00b78c9028f3bf3b1af3efa58 | p21@CD164 |
5.42e-195 | FFCP PHASE1:Hg19::chr3:2141851..2141858,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:2141851..2141858, - |
5.42e-195 | FFCP PHASE2:Hg19::chr10:33244302..33244305,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr10:33244302..33244305, - |
5.42e-195 | FFCP PHASE1:Hg19::chr6:152589345..152589353,-#_a94794a00b78c9028f3bf3b1af3efa58 | p63@SYNE1 |
5.42e-195 | FFCP PHASE2:Hg19::chr7:94540075..94540082,+#_a94794a00b78c9028f3bf3b1af3efa58 | p21@PPP1R9A |
5.42e-195 | FFCP PHASE2:Hg19::chr1:198595872..198595878,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:198595872..198595878, + |
5.42e-195 | FFCP PHASE1:Hg19::chr3:157230582..157230593,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:157230582..157230593, + |
5.42e-195 | FFCP PHASE1:Hg19::chr1:192407901..192407907,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:192407901..192407907, - |
5.42e-195 | FFCP PHASE1:Hg19::chr19:41281630..41281644,+#_a94794a00b78c9028f3bf3b1af3efa58 | p6@RAB4B |
5.42e-195 | FFCP PHASE2:Hg19::chr6:142993137..142993142,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr6:142993137..142993142, + |
5.42e-195 | FFCP PHASE1:Hg19::chr4:169935453..169935460,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr4:169935453..169935460, - |
5.42e-195 | FFCP PHASE1:Hg19::chr3:2140234..2140235,+#_a94794a00b78c9028f3bf3b1af3efa58 | p36@CNTN4 |
5.42e-195 | FFCP PHASE1:Hg19::chr1:228806586..228806591,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:228806586..228806591, + |
5.42e-195 | FFCP PHASE1:Hg19::chr4:72897846..72897853,+#_a94794a00b78c9028f3bf3b1af3efa58 | p7@NPFFR2 |
5.42e-195 | FFCP PHASE2:Hg19::chr9:13005000..13005036,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr9:13005000..13005036, - |
5.42e-195 | FFCP PHASE2:Hg19::chr19:56047669..56047674,-#_a94794a00b78c9028f3bf3b1af3efa58 | p7@SBK2 |
5.42e-195 | FFCP PHASE1:Hg19::chr12:70636933..70636940,+#_a94794a00b78c9028f3bf3b1af3efa58 | p28@CNOT2 |
5.42e-195 | FFCP PHASE1:Hg19::chr2:188420470..188420480,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr2:188420470..188420480, + |
5.42e-195 | FFCP PHASE1:Hg19::chr4:145124273..145124279,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr4:145124273..145124279, + |
5.42e-195 | FFCP PHASE2:Hg19::chr3:30442082..30442087,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:30442082..30442087, - |
5.42e-195 | FFCP PHASE2:Hg19::chr1:158989981..158989988,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:158989981..158989988, + |
5.42e-195 | FFCP PHASE2:Hg19::chr12:71031310..71031321,-#_a94794a00b78c9028f3bf3b1af3efa58 | p14@PTPRB |
5.42e-195 | FFCP PHASE2:Hg19::chr3:1577586..1577600,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:1577586..1577600, - |
5.42e-195 | FFCP PHASE1:Hg19::chr18:74961699..74961708,+#_a94794a00b78c9028f3bf3b1af3efa58 | p5@GALR1 |
5.42e-195 | FFCP PHASE1:Hg19::chr12:80818234..80818245,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr12:80818234..80818245, + |
5.42e-195 | FFCP PHASE2:Hg19::chr21:17357327..17357329,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr21:17357327..17357329, - |
5.42e-195 | FFCP PHASE1:Hg19::chr6:152792957..152792960,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr6:152792957..152792960, - |
5.42e-195 | FFCP PHASE1:Hg19::chr9:12848028..12848033,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr9:12848028..12848033, - |
5.42e-195 | FFCP PHASE1:Hg19::chr3:177555440..177555446,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:177555440..177555446, - |
5.42e-195 | FFCP PHASE1:Hg19::chr1:197886803..197886812,+#_a94794a00b78c9028f3bf3b1af3efa58 | p7@LHX9 |
5.42e-195 | FFCP PHASE1:Hg19::chr19:56047661..56047668,-#_a94794a00b78c9028f3bf3b1af3efa58 | p4@SBK2 |
5.42e-195 | FFCP PHASE1:Hg19::chr18:22251696..22251702,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr18:22251696..22251702, - |
5.42e-195 | FFCP PHASE2:Hg19::chrX:135338270..135338275,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chrX:135338270..135338275, - |
5.42e-195 | FFCP PHASE2:Hg19::chr6:152590257..152590288,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr6:152590257..152590288, - |
5.42e-195 | FFCP PHASE1:Hg19::chr3:2141993..2142006,+#_a94794a00b78c9028f3bf3b1af3efa58 | p6@CNTN4 |