UBERON:0000485: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:CARO_0000068-FMA_45567-ZFA_0001496 | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="Unilaminar epithelium, which consists of a single layer of columnar cells. Examples: ciliated columnar epithelium, gastric epithelium, microvillus columnar epithelium.[FMA]" [CARO:MAH, FMA:FMA, Wikipedia:Simple_columnar_epithelium] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0000485 | |||
|is_a=UBERON:0000490 ;;UBERON:0012274 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=simple columnar epithelium | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of columnar cells.[AAO]" xsd:string;;UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of columnar cells.[CARO]" xsd:string;;UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of columnar cells.[TAO]" xsd:string | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of columnar cells.[AAO]" xsd:string;;UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of columnar cells.[CARO]" xsd:string;;UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of columnar cells.[TAO]" xsd:string | ||
| | |subset=uberon_slim;;vertebrate_core | ||
| | |synonym="columnar epithelium" EXACT [EHDAA2:0003068];;"columnar epithlium" EXACT [AEO:0000068];;"epithelium simplex columnare" EXACT [];;"simple columnar epithelium" EXACT [] | ||
|union_of= | |||
|xref=AAO:0010063;;AEO:0000068;;BILA:0000068;;CARO:0000068;;EHDAA2:0003068;;FBbt:00007027;;FMA:45567;;HAO:0000068;;http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray1059.png;;http://upload.wikimedia.org/wikipedia/commons/thumb/8/8b/Gray1059.png/200px-Gray1059.png;;ncithesaurus:Simple_Columnar_Epithelium;;TAO:0001496;;XAO:0004008;;ZFA:0001496 | |||
}} | }} | ||
Latest revision as of 17:10, 12 September 2014
| Name: | simple columnar epithelium | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "Unilaminar epithelium, which consists of a single layer of columnar cells. Examples: ciliated columnar epithelium, gastric epithelium, microvillus columnar epithelium.[FMA]" [CARO:MAH, FMA:FMA, Wikipedia:Simple_columnar_epithelium] | |
| Xrefs: |
| |
| Synonyms: |
"columnar epithelium" EXACT [EHDAA2:0003068] "columnar epithlium" EXACT [AEO:0000068] "epithelium simplex columnare" EXACT [] "simple columnar epithelium" EXACT [] | |
| Alt_id: | UBERON:CARO_0000068-FMA_45567-ZFA_0001496 | |
| Subset: |
uberon_slim vertebrate_core |
Gray1059.png]
200px-Gray1059.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000490(unilaminar epithelium),UBERON:0012274(columnar epithelium) |
|---|
Children
| is a: | UBERON:0001277 (intestinal epithelium),UBERON:0001997 (olfactory epithelium),UBERON:0002031 (epithelium of bronchus),UBERON:0007497 (developing epithelial placode) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10275-104E5
- 10303-104H6
- 10331-105B7
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10511-107D7
- 10513-107D9 (colon carcinoma cell line:CACO-2)
- 10523-107F1
- 10557-107I8
- 10635-108I5
- 10653-109B5
... further results Mouse (Mus musculus)
- 10275-104E5
- 10303-104H6
- 10331-105B7
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10511-107D7
- 10513-107D9 (colon carcinoma cell line:CACO-2)
- 10523-107F1
- 10557-107I8
- 10635-108I5
- 10653-109B5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000485 (simple columnar epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of columnar cells.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of columnar cells.[CARO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of columnar cells.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
