UBERON:0000993: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:FBbt_00004911-FMA_18245-MA_0000385-MIAA_0000126-XAO_0003052-ZFA_0000560 | ||
|comment=note that the more specific class fallopian tube is included, which has mammal-specific relationships | |comment=note that the more specific class fallopian tube is included, which has mammal-specific relationships | ||
|created_by= | |created_by= | ||
| | |def="passage from the ovaries to the outside of the body[Wikipedia:Oviduct]." [Wikipedia:Oviduct] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0000993 | |||
|is_a=UBERON:0000025 ;;UBERON:0005156 ;;UBERON:0014404 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=oviduct | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000474 | |part_of=UBERON:0000474 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset=uberon_slim;;vertebrate_core | ||
| | |synonym="salpinx" RELATED [BTO:0000980];;"tuba uterina" RELATED [BTO:0000980];;"tuba uterinae" RELATED [BTO:0000980];;"uterine tube" RELATED [] | ||
|union_of= | |||
|xref=AAO:0010533;;BTO:0000980;;EFO:0000974;;EMAPA:18984;;GAID:366;;MAT:0000126;;MESH:A.13.706;;MIAA:0000126;;ncithesaurus:Oviduct;;TAO:0000560;;VHOG:0001136;;XAO:0003052;;ZFA:0000560 | |||
}} | }} | ||
Latest revision as of 17:13, 12 September 2014
| Name: | oviduct | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "passage from the ovaries to the outside of the body[Wikipedia:Oviduct]." [Wikipedia:Oviduct] | |
| Xrefs: |
| |
| Synonyms: |
"salpinx" RELATED [BTO:0000980] "tuba uterina" RELATED [BTO:0000980] "tuba uterinae" RELATED [BTO:0000980] "uterine tube" RELATED [] | |
| Comments: | note that the more specific class fallopian tube is included, which has mammal-specific relationships | |
| Alt_id: | UBERON:FBbt_00004911-FMA_18245-MA_0000385-MIAA_0000126-XAO_0003052-ZFA_0000560 | |
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000025(tube),UBERON:0005156(reproductive structure),UBERON:0014404(female anatomical structure) |
|---|---|
| part_of: | UBERON:0000474(female reproductive system) |
Children
| derives from: | FF:0011442 (mouse oviduct- adult pregnant day01 sample) |
|---|---|
| part of: | UBERON:0003889 (fallopian tube),UBERON:0004804 (oviduct epithelium),UBERON:0013515 (subdivision of uterine tube) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 988-6G6 (oviduct, adult pregnant day01)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000993 (oviduct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
