UBERON:0002046: Difference between revisions
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|has_quality= | |has_quality= | ||
|id=UBERON:0002046 | |id=UBERON:0002046 | ||
|is_a=UBERON:0002368;;UBERON:0004119;;UBERON:0010314 | |is_a=UBERON:0002368 ;;UBERON:0004119 ;;UBERON:0010314 | ||
|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
|name=thyroid gland | |name=thyroid gland | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000949 | |part_of=UBERON:0000949 | ||
Latest revision as of 17:24, 12 September 2014
| Name: | thyroid gland | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A two-lobed endocrine gland found in all vertebrates, located in front of and on either side of the trachea in humans, and producing various hormones, such as triiodothyronine and calcitonin[BTO]. A highly vascular endocrine gland consisting of two lobes, one on either side of the trachea, joined by a narrow isthmus; it produces the thyroid hormones which are concerned in regulating the metabolic rate of the body[GAID]." [BTO:0001379, GAID:465, Wikipedia:Thyroid] | ||
| Xrefs: |
| ||
| Synonyms: |
"glandula thyroidea" RELATED LATIN [Wikipedia:Thyroid] "thyroid" EXACT [] | ||
| Alt_id: | UBERON:FMA_68805-FMA_9603-MA_0000129-MA_0000726-MIAA_0000081-XAO_0000162-ZFA_0001072 | ||
| Subset: |
organ_slim uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002368(endocrine gland),UBERON:0004119(endoderm-derived structure),UBERON:0010314(structure with developmental contribution from neural crest) |
|---|---|
| develops_from: | UBERON:0007689(thyroid diverticulum) |
| part_of: | UBERON:0000949(endocrine system) |
Children
| derives from: | FF:0010028 (human thyroid - adult sample),FF:0010060 (human thyroid - fetal sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10028-101E1 (thyroid, adult, pool1)
- 10060-101H6 (thyroid, fetal, donor1)
- 10098-102C8
- 10428-106D5 (anaplastic carcinoma cell line:8305C)
- 10437-106E5 (papillary adenocarcinoma cell line:8505C)
- 10750-110D3
- 10776-110G2 (thyroid carcinoma cell line:KHM-5M)
- 10783-110G9 (thyroid carcinoma cell line:TCO-1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002046 (thyroid gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.76e-118 | FFCP PHASE2:Hg19::chr8:11333461..11333472,-#_1987a6adcd9eb646d949d07d0bdca71b | p@chr8:11333461..11333472, - |
| 7.76e-118 | FFCP PHASE1:Hg19::chr8:11333461..11333472,-#_1987a6adcd9eb646d949d07d0bdca71b | p@chr8:11333461..11333472, - |
| 6.64e-89 | FFCP PHASE2:Hg19::chr8:11333445..11333459,-#_9ad73dfb8e3151378504da699925f2e7 | p@chr8:11333445..11333459, - |
| 6.64e-89 | FFCP PHASE1:Hg19::chr8:11333445..11333459,-#_9ad73dfb8e3151378504da699925f2e7 | p@chr8:11333445..11333459, - |
| 3.18e-79 | FFCP PHASE1:Hg19::chr14:36645825..36645840,-#_5eb7332b0d7e48332de68978eccad587 | p5@ENST00000556013 |
| 3.18e-79 | FFCP PHASE2:Hg19::chr14:36645825..36645840,-#_5eb7332b0d7e48332de68978eccad587 | p5@ENST00000556013 |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133900606..133900611,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133900606..133900611, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr9:100615454..100615457,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr9:100615454..100615457, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:134125750..134125765,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:134125750..134125765, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133894753..133894756,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133894753..133894756, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr19:20473429..20473445,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr19:20473429..20473445, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133898763..133898768,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133898763..133898768, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133981720..133981727,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p21@TG |
| 3.49e-79 | FFCP PHASE1:Hg19::chr9:100616714..100616732,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr9:100616714..100616732, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr2:1417344..1417367,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr2:1417344..1417367, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:134107312..134107315,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p46@TG |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133900606..133900611,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133900606..133900611, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133885307..133885312,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133885307..133885312, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133906121..133906132,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133906121..133906132, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr7:107301406..107301418,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p5@SLC26A4 |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133883693..133883699,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133883693..133883699, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr9:100616714..100616732,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr9:100616714..100616732, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133894753..133894756,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133894753..133894756, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr2:1457477..1457487,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr2:1457477..1457487, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133895057..133895065,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133895057..133895065, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:134125750..134125765,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:134125750..134125765, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133981720..133981727,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p21@TG |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:134107312..134107315,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p46@TG |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133900431..133900436,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133900431..133900436, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr14:21560489..21560506,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr14:21560489..21560506, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133885307..133885312,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133885307..133885312, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr2:1417430..1417444,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr2:1417430..1417444, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133980132..133980143,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133980132..133980143, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr7:107301406..107301418,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p5@SLC26A4 |
| 3.49e-79 | FFCP PHASE1:Hg19::chr21:39644214..39644219,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p21@KCNJ15 |
| 3.49e-79 | FFCP PHASE2:Hg19::chr16:66420861..66420868,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr16:66420861..66420868, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr2:1457477..1457487,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr2:1457477..1457487, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133900431..133900436,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133900431..133900436, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133895057..133895065,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133895057..133895065, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr14:67998625..67998628,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr14:67998625..67998628, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133899413..133899418,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133899413..133899418, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr4:88047429..88047437,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr4:88047429..88047437, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133882027..133882038,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133882027..133882038, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr21:39644214..39644219,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p21@KCNJ15 |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133894780..133894789,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133894780..133894789, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr15:64421903..64421920,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr15:64421903..64421920, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr14:81421428..81421431,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p11@TSHR |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133980132..133980143,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133980132..133980143, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133899413..133899418,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133899413..133899418, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr4:88047429..88047437,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr4:88047429..88047437, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133961114..133961122,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133961114..133961122, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133981730..133981736,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p38@TG |
| 3.49e-79 | FFCP PHASE1:Hg19::chr2:1417430..1417444,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr2:1417430..1417444, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:134107327..134107332,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p29@TG |
| 3.49e-79 | FFCP PHASE2:Hg19::chr2:134788853..134788858,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr2:134788853..134788858, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr1:36771641..36771644,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p11@SH3D21 |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133953595..133953600,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133953595..133953600, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr16:66420861..66420868,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr16:66420861..66420868, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133894780..133894789,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133894780..133894789, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr2:1457500..1457511,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr2:1457500..1457511, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133899244..133899254,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133899244..133899254, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133882027..133882038,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133882027..133882038, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133981730..133981736,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p38@TG |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133961114..133961122,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133961114..133961122, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:134107327..134107332,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p29@TG |
| 3.49e-79 | FFCP PHASE1:Hg19::chr1:36771641..36771644,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p11@SH3D21 |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133953595..133953600,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133953595..133953600, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr2:134788853..134788858,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr2:134788853..134788858, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133899244..133899254,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133899244..133899254, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr2:1457500..1457511,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr2:1457500..1457511, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:134145709..134145716,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p18@TG |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133895164..133895167,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133895164..133895167, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133898957..133898963,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133898957..133898963, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr2:1426812..1426834,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p5@TPO |
| 3.49e-79 | FFCP PHASE2:Hg19::chr6:43837226..43837237,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr6:43837226..43837237, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr18:24321747..24321752,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr18:24321747..24321752, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133900307..133900325,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133900307..133900325, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133895164..133895167,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133895164..133895167, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133898734..133898737,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133898734..133898737, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133898957..133898963,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133898957..133898963, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:134145709..134145716,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p18@TG |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133900307..133900325,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133900307..133900325, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr2:1459933..1459941,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr2:1459933..1459941, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr2:1426812..1426834,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p5@TPO |
| 3.49e-79 | FFCP PHASE2:Hg19::chr2:1440068..1440076,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr2:1440068..1440076, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr6:43837226..43837237,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr6:43837226..43837237, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr18:24321747..24321752,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr18:24321747..24321752, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr14:81421428..81421431,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p11@TSHR |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133885414..133885420,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133885414..133885420, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133898734..133898737,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133898734..133898737, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133981694..133981700,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p35@TG |
| 3.49e-79 | FFCP PHASE1:Hg19::chr7:107301447..107301451,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p23@SLC26A4 |
| 3.49e-79 | FFCP PHASE1:Hg19::chr2:1459933..1459941,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr2:1459933..1459941, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:134145732..134145736,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p27@TG |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133895195..133895206,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133895195..133895206, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:11333494..11333497,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:11333494..11333497, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr2:1440068..1440076,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr2:1440068..1440076, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:133899004..133899013,-#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133899004..133899013, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133978809..133978829,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p@chr8:133978809..133978829, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:133981694..133981700,+#_c3acdbdab95ff7e7ff9785f331e9ff61 | p35@TG |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Either of paired structures located in the throat which develop from the ventral wall of the pharynx and excretes hormones involved in the morphological and functional changes during metamorphosis as well as influencing other tissues.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
