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{{UBERON
{{UBERON
|id=UBERON:0002416
|name=integumental system
|namespace=
|def="organ system that protects the body from damage, comprising the skin and its appendages (including hair, scales, and nails). The integumentary system has a variety of functions; it may serve to waterproof, cushion and protect the deeper tissues, excrete wastes, regulate temperature and is the location of receptors for pain, sensation, pressure and temperature. In humans the integumentary system additionally provides vitamin D synthesis[WP]." [Wikipedia:Integumentary_system]
|xref=EFO:0000807;;EHDAA:6520;;EHDAA2:0000836;;EMAPA:17524;;EV:0100151;;FBbt:00004969;;FMA:72979;;HAO:0000421;;MA:0000014;;MAT:0000033;;MESH:A.17;;ncithesaurus:Integumentary_System;;SCTID:361692004;;TADS:0000108;;VHOG:0000403;;XAO:0000176
|is_a=UBERON:0000467
|synonym="integumentary system" EXACT [FMA:72979]
|comment=in FMA, integumentary system = integument + certain glands. Note that here we use integumental system in a general sense
|alt_id=UBERON:MA_0000014-FMA_72979
|alt_id=UBERON:MA_0000014-FMA_72979
|disjoint_from=UBERON:0002423;;UBERON:0004456
|anatomical_img_id=FMA:72979
|union_of=
|comment=in FMA, integumentary system
|created_by=
|created_by=
|obo_creation_date=
|def="organ system that protects the body from damage, comprising the skin and its adnexa (including hair, scales, and nails). The integumentary system has a variety of functions; it may serve to waterproof, cushion and protect the deeper tissues, excrete wastes, regulate temperature and is the location of receptors for pain, sensation, pressure and temperature. In humans the integumentary system additionally provides vitamin D synthesis[WP]." [Wikipedia:Integumentary_system]
|subset=grouping_class
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=UBERON:0002423;;UBERON:0004456
|has_quality=
|has_quality=
|id=UBERON:0002416
|is_a=UBERON:0000467
|is_obsolete=
|located_in=
|located_in=
|name=integumental system
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=grouping_class
|synonym="integumentary system" EXACT [FMA:72979];;"integumentum commune" RELATED LATIN [Wikipedia:Integumentary_system]
|union_of=
|xref=EFO:0000807;;EHDAA2:0000836;;EHDAA:6520;;EMAPA:17524;;EV:0100151;;FBbt:00004969;;FMA:72979;;HAO:0000421;;MA:0000014;;MAT:0000033;;MESH:A.17;;ncithesaurus:Integumentary_System;;SCTID:361692004;;TADS:0000108;;VHOG:0000403;;XAO:0000176
}}
}}

Latest revision as of 17:31, 12 September 2014

Name:integumental system
Namespace:FANTOM
Definition:"organ system that protects the body from damage, comprising the skin and its adnexa (including hair, scales, and nails). The integumentary system has a variety of functions; it may serve to waterproof, cushion and protect the deeper tissues, excrete wastes, regulate temperature and is the location of receptors for pain, sensation, pressure and temperature. In humans the integumentary system additionally provides vitamin D synthesis[WP]." [Wikipedia:Integumentary_system]
Xrefs:
links:

EFO:0000807
EHDAA2:0000836
EHDAA:6520
EMAPA:17524
EV:0100151
FBbt:00004969
FMA:72979
HAO:0000421
MA:0000014
MAT:0000033
MESH:A.17
ncithesaurus:Integumentary_System
SCTID:361692004
TADS:0000108
VHOG:0000403

XAO:0000176
Synonyms: "integumentary system" EXACT [FMA:72979]
"integumentum commune" RELATED LATIN [Wikipedia:Integumentary_system]
Comments:in FMA, integumentary system
Alt_id: UBERON:MA_0000014-FMA_72979
Subset: grouping_class

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000467(anatomical system)
disjoint_from:UBERON:0002423(hepatobiliary system),UBERON:0004456(entire sense organ system)



Children

disjoint from:UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system),UBERON:0001033 (gustatory system),UBERON:0001434 (skeletal system),UBERON:0002204 (musculoskeletal system),UBERON:0002294 (biliary system),UBERON:0002330 (exocrine system),UBERON:0002390 (hematopoietic system),UBERON:0002405 (immune system)
part of:UBERON:0001911 (mammary gland),UBERON:0002199 (integument),UBERON:0003102 (surface structure),UBERON:0003297 (gland of integumental system),UBERON:0006003 (integumentary adnexa),UBERON:0013703 (integumentary projection),UBERON:0013754 (integumentary system layer)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002416 (integumental system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.4e-86FFCP PHASE2:Mm9::chr11:36246521..36246530,-#_70d10d33956a889c76104271e630d0dfp@chr11:36246521..36246530, -
1.4e-86FFCP PHASE2:Mm9::chr5:137057540..137057550,-#_70d10d33956a889c76104271e630d0dfp@chr5:137057540..137057550, -
1.4e-86FFCP PHASE2:Mm9::chr13:113381448..113381495,-#_70d10d33956a889c76104271e630d0dfp@chr13:113381448..113381495, -
1.4e-86FFCP PHASE1:Mm9::chr15:101593988..101593997,-#_70d10d33956a889c76104271e630d0dfp1@Krt74
1.4e-86FFCP PHASE2:Mm9::chr1:191609138..191609151,+#_70d10d33956a889c76104271e630d0dfp@chr1:191609138..191609151, +
1.4e-86FFCP PHASE1:Mm9::chr11:36246521..36246530,-#_70d10d33956a889c76104271e630d0dfp@chr11:36246521..36246530, -
1.4e-86FFCP PHASE2:Mm9::chr11:94981134..94981147,+#_70d10d33956a889c76104271e630d0dfp2@Dlx3
1.4e-86FFCP PHASE2:Mm9::chr4:113836042..113836053,+#_70d10d33956a889c76104271e630d0dfp2@Skint11
1.4e-86FFCP PHASE2:Mm9::chr15:101593988..101593997,-#_70d10d33956a889c76104271e630d0dfp1@Krt74
1.4e-86FFCP PHASE1:Mm9::chr11:94981134..94981147,+#_70d10d33956a889c76104271e630d0dfp2@Dlx3
1.4e-86FFCP PHASE2:Mm9::chr4:138313406..138313411,-#_70d10d33956a889c76104271e630d0dfp2@Pla2g2f
1.4e-86FFCP PHASE2:Mm9::chr11:99227413..99227429,-#_70d10d33956a889c76104271e630d0dfp@chr11:99227413..99227429, -
1.4e-86FFCP PHASE1:Mm9::chr11:99227413..99227429,-#_70d10d33956a889c76104271e630d0dfp@chr11:99227413..99227429, -
1.4e-86FFCP PHASE2:Mm9::chr4:113836063..113836075,+#_70d10d33956a889c76104271e630d0dfp1@Skint11
1.4e-86FFCP PHASE1:Mm9::chr4:113836042..113836053,+#_70d10d33956a889c76104271e630d0dfp2@Skint11
1.4e-86FFCP PHASE1:Mm9::chr13:113381448..113381495,-#_70d10d33956a889c76104271e630d0dfp@chr13:113381448..113381495, -
1.4e-86FFCP PHASE1:Mm9::chr4:138313406..138313411,-#_70d10d33956a889c76104271e630d0dfp2@Pla2g2f
1.4e-86FFCP PHASE1:Mm9::chr5:137057540..137057550,-#_70d10d33956a889c76104271e630d0dfp@chr5:137057540..137057550, -
1.4e-86FFCP PHASE1:Mm9::chr4:113836063..113836075,+#_70d10d33956a889c76104271e630d0dfp1@Skint11
1.4e-86FFCP PHASE1:Mm9::chr1:191609138..191609151,+#_70d10d33956a889c76104271e630d0dfp@chr1:191609138..191609151, +
1.07e-72FFCP PHASE1:Mm9::chr11:99207849..99207853,-#_f6c13474aa7925174ae82c4a3b771099p@chr11:99207849..99207853, -
1.07e-72FFCP PHASE1:Mm9::chr7:97432305..97432311,+#_f6c13474aa7925174ae82c4a3b771099p@chr7:97432305..97432311, +
1.07e-72FFCP PHASE2:Mm9::chr1:46949894..46949911,-#_f6c13474aa7925174ae82c4a3b771099p@chr1:46949894..46949911, -
1.07e-72FFCP PHASE2:Mm9::chr7:127260268..127260277,+#_f6c13474aa7925174ae82c4a3b771099p@chr7:127260268..127260277, +
1.07e-72FFCP PHASE1:Mm9::chr7:127260268..127260277,+#_f6c13474aa7925174ae82c4a3b771099p@chr7:127260268..127260277, +
1.07e-72FFCP PHASE2:Mm9::chr5:137057441..137057450,-#_f6c13474aa7925174ae82c4a3b771099p@chr5:137057441..137057450, -
1.07e-72FFCP PHASE1:Mm9::chr5:137057441..137057450,-#_f6c13474aa7925174ae82c4a3b771099p@chr5:137057441..137057450, -
1.07e-72FFCP PHASE2:Mm9::chr7:97432305..97432311,+#_f6c13474aa7925174ae82c4a3b771099p@chr7:97432305..97432311, +
1.07e-72FFCP PHASE2:Mm9::chr5:137057490..137057506,-#_f6c13474aa7925174ae82c4a3b771099p@chr5:137057490..137057506, -
1.07e-72FFCP PHASE1:Mm9::chr5:137057490..137057506,-#_f6c13474aa7925174ae82c4a3b771099p@chr5:137057490..137057506, -
1.07e-72FFCP PHASE1:Mm9::chr1:133938531..133938534,-#_f6c13474aa7925174ae82c4a3b771099p6@Mfsd4
1.07e-72FFCP PHASE2:Mm9::chr1:133938531..133938534,-#_f6c13474aa7925174ae82c4a3b771099p6@Mfsd4
1.07e-72FFCP PHASE1:Mm9::chr1:46949894..46949911,-#_f6c13474aa7925174ae82c4a3b771099p@chr1:46949894..46949911, -
1.07e-72FFCP PHASE2:Mm9::chr3:90343597..90343613,+#_f6c13474aa7925174ae82c4a3b771099p@chr3:90343597..90343613, +
1.07e-72FFCP PHASE2:Mm9::chr15:83953604..83953633,-#_f6c13474aa7925174ae82c4a3b771099p1@Pnpla5
1.07e-72FFCP PHASE1:Mm9::chr3:90343597..90343613,+#_f6c13474aa7925174ae82c4a3b771099p@chr3:90343597..90343613, +
1.07e-72FFCP PHASE2:Mm9::chr11:99207849..99207853,-#_f6c13474aa7925174ae82c4a3b771099p@chr11:99207849..99207853, -
1.07e-72FFCP PHASE1:Mm9::chr15:83953604..83953633,-#_f6c13474aa7925174ae82c4a3b771099p1@Pnpla5
1.5e-72FFCP PHASE1:Mm9::chr10:43724117..43724131,-#_dede73623376eb9832986da19b06a99ep@chr10:43724117..43724131, -
1.5e-72FFCP PHASE2:Mm9::chr3:138004932..138004945,+#_dede73623376eb9832986da19b06a99ep@chr3:138004932..138004945, +
1.5e-72FFCP PHASE1:Mm9::chr1:37973330..37973344,-#_dede73623376eb9832986da19b06a99ep1@Lyg2
1.5e-72FFCP PHASE2:Mm9::chr1:37973257..37973271,-#_dede73623376eb9832986da19b06a99ep2@Lyg2
1.5e-72FFCP PHASE2:Mm9::chr15:25672069..25672077,+#_dede73623376eb9832986da19b06a99ep25@Myo10
1.5e-72FFCP PHASE1:Mm9::chr10:66991117..66991146,+#_dede73623376eb9832986da19b06a99ep@chr10:66991117..66991146, +
1.5e-72FFCP PHASE2:Mm9::chr10:66991117..66991146,+#_dede73623376eb9832986da19b06a99ep@chr10:66991117..66991146, +
1.5e-72FFCP PHASE1:Mm9::chr6:134595955..134595965,-#_dede73623376eb9832986da19b06a99ep@chr6:134595955..134595965, -
1.5e-72FFCP PHASE2:Mm9::chr1:37973330..37973344,-#_dede73623376eb9832986da19b06a99ep1@Lyg2
1.5e-72FFCP PHASE1:Mm9::chr15:25672069..25672077,+#_dede73623376eb9832986da19b06a99ep25@Myo10
1.5e-72FFCP PHASE1:Mm9::chr13:112045218..112045226,+#_dede73623376eb9832986da19b06a99ep1@Actbl2
1.5e-72FFCP PHASE2:Mm9::chr6:97778311..97778326,+#_dede73623376eb9832986da19b06a99ep@chr6:97778311..97778326, +
1.5e-72FFCP PHASE1:Mm9::chr3:138004932..138004945,+#_dede73623376eb9832986da19b06a99ep@chr3:138004932..138004945, +
1.5e-72FFCP PHASE1:Mm9::chr6:97778311..97778326,+#_dede73623376eb9832986da19b06a99ep@chr6:97778311..97778326, +
1.5e-72FFCP PHASE2:Mm9::chr13:112045218..112045226,+#_dede73623376eb9832986da19b06a99ep1@Actbl2
1.5e-72FFCP PHASE1:Mm9::chr1:37973257..37973271,-#_dede73623376eb9832986da19b06a99ep2@Lyg2
1.5e-72FFCP PHASE2:Mm9::chr6:134595955..134595965,-#_dede73623376eb9832986da19b06a99ep@chr6:134595955..134595965, -
1.5e-72FFCP PHASE2:Mm9::chr10:43724117..43724131,-#_dede73623376eb9832986da19b06a99ep@chr10:43724117..43724131, -
2.1e-72FFCP PHASE2:Mm9::chr7:117436977..117436981,-#_aab5cfabbcdc99b940afb2d2cc28c57bp@chr7:117436977..117436981, -
2.1e-72FFCP PHASE1:Mm9::chr4:82496625..82496637,-#_aab5cfabbcdc99b940afb2d2cc28c57bp6@Zdhhc21
2.1e-72FFCP PHASE1:Mm9::chr7:117436977..117436981,-#_aab5cfabbcdc99b940afb2d2cc28c57bp@chr7:117436977..117436981, -
2.1e-72FFCP PHASE1:Mm9::chr1:89485356..89485361,+#_aab5cfabbcdc99b940afb2d2cc28c57bp@chr1:89485356..89485361, +
2.1e-72FFCP PHASE2:Mm9::chr4:82496625..82496637,-#_aab5cfabbcdc99b940afb2d2cc28c57bp6@Zdhhc21
2.1e-72FFCP PHASE1:Mm9::chr4:111707315..111707319,+#_aab5cfabbcdc99b940afb2d2cc28c57bp@chr4:111707315..111707319, +
2.1e-72FFCP PHASE2:Mm9::chr1:89485356..89485361,+#_aab5cfabbcdc99b940afb2d2cc28c57bp@chr1:89485356..89485361, +
2.1e-72FFCP PHASE2:Mm9::chr4:111707315..111707319,+#_aab5cfabbcdc99b940afb2d2cc28c57bp@chr4:111707315..111707319, +
4.13e-72FFCP PHASE1:Mm9::chr4:113672105..113672116,-#_95f811857623b89bfe07694be75b3ceap1@Skint5
4.13e-72FFCP PHASE2:Mm9::chr4:113672105..113672116,-#_95f811857623b89bfe07694be75b3ceap1@Skint5
1.65e-69FFCP PHASE1:Mm9::chr5:81472249..81472294,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr5:81472249..81472294, +
1.65e-69FFCP PHASE1:Mm9::chr16:56831943..56831948,-#_9f6db254dc91b873bbaf97ed5396e5f9p14@Tmem45a
1.65e-69FFCP PHASE2:Mm9::chr18:20469239..20469258,+#_9f6db254dc91b873bbaf97ed5396e5f9p2@Dsg1a
1.65e-69FFCP PHASE2:Mm9::chr8:63958211..63958219,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr8:63958211..63958219, +
1.65e-69FFCP PHASE1:Mm9::chr14:57868950..57868959,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr14:57868950..57868959, +
1.65e-69FFCP PHASE2:Mm9::chr6:144579044..144579056,-#_9f6db254dc91b873bbaf97ed5396e5f9p@chr6:144579044..144579056, -
1.65e-69FFCP PHASE2:Mm9::chrX:166374681..166374688,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chrX:166374681..166374688, +
1.65e-69FFCP PHASE2:Mm9::chr3:93248462..93248471,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr3:93248462..93248471, +
1.65e-69FFCP PHASE1:Mm9::chr4:144311334..144311342,-#_9f6db254dc91b873bbaf97ed5396e5f9p3@Gm13178
1.65e-69FFCP PHASE2:Mm9::chr6:97778294..97778306,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr6:97778294..97778306, +
1.65e-69FFCP PHASE1:Mm9::chr9:43876286..43876293,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr9:43876286..43876293, +
1.65e-69FFCP PHASE2:Mm9::chr3:93249140..93249149,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr3:93249140..93249149, +
1.65e-69FFCP PHASE2:Mm9::chr11:99957587..99957593,-#_9f6db254dc91b873bbaf97ed5396e5f9p2@Krt35
1.65e-69FFCP PHASE1:Mm9::chr18:20469239..20469258,+#_9f6db254dc91b873bbaf97ed5396e5f9p2@Dsg1a
1.65e-69FFCP PHASE1:Mm9::chr6:97778294..97778306,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr6:97778294..97778306, +
1.65e-69FFCP PHASE1:Mm9::chr3:59629633..59629644,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr3:59629633..59629644, +
1.65e-69FFCP PHASE2:Mm9::chr15:101770858..101770865,-#_9f6db254dc91b873bbaf97ed5396e5f9p2@Krt79
1.65e-69FFCP PHASE2:Mm9::chr3:93248809..93248818,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr3:93248809..93248818, +
1.65e-69FFCP PHASE1:Mm9::chr4:144155170..144155177,-#_9f6db254dc91b873bbaf97ed5396e5f9p2@Gm13124
1.65e-69FFCP PHASE1:Mm9::chr3:93248889..93248897,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr3:93248889..93248897, +
1.65e-69FFCP PHASE2:Mm9::chr2:129949046..129949050,+#_9f6db254dc91b873bbaf97ed5396e5f9p2@Tgm6
1.65e-69FFCP PHASE2:Mm9::chr16:56831943..56831948,-#_9f6db254dc91b873bbaf97ed5396e5f9p14@Tmem45a
1.65e-69FFCP PHASE2:Mm9::chr5:113617681..113617724,-#_9f6db254dc91b873bbaf97ed5396e5f9p@chr5:113617681..113617724, -
1.65e-69FFCP PHASE1:Mm9::chr3:93250018..93250027,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr3:93250018..93250027, +
1.65e-69FFCP PHASE2:Mm9::chr14:21082655..21082682,-#_9f6db254dc91b873bbaf97ed5396e5f9p@chr14:21082655..21082682, -
1.65e-69FFCP PHASE1:Mm9::chr3:93248697..93248704,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr3:93248697..93248704, +
1.65e-69FFCP PHASE2:Mm9::chr5:75107109..75107125,-#_9f6db254dc91b873bbaf97ed5396e5f9p@chr5:75107109..75107125, -
1.65e-69FFCP PHASE2:Mm9::chr11:99913595..99913606,+#_9f6db254dc91b873bbaf97ed5396e5f9p1@ENSMUST00000136820, p1@uc007lke.1
1.65e-69FFCP PHASE2:Mm9::chr4:57351817..57351823,-#_9f6db254dc91b873bbaf97ed5396e5f9p@chr4:57351817..57351823, -
1.65e-69FFCP PHASE1:Mm9::chr5:75107109..75107125,-#_9f6db254dc91b873bbaf97ed5396e5f9p@chr5:75107109..75107125, -
1.65e-69FFCP PHASE2:Mm9::chr18:20631745..20631746,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr18:20631745..20631746, +
1.65e-69FFCP PHASE1:Mm9::chr3:93249140..93249149,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr3:93249140..93249149, +
1.65e-69FFCP PHASE1:Mm9::chr14:21082655..21082682,-#_9f6db254dc91b873bbaf97ed5396e5f9p@chr14:21082655..21082682, -
1.65e-69FFCP PHASE2:Mm9::chr9:43876286..43876293,+#_9f6db254dc91b873bbaf97ed5396e5f9p@chr9:43876286..43876293, +

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